Oncorhynchus kisutch (coho salmon): 109894140
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Entry
109894140 CDS
T09179
Name
(RefSeq) GTP-binding nuclear protein Ran-like
KO
K07936
GTP-binding nuclear protein Ran
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki03008
Ribosome biogenesis in eukaryotes
oki03013
Nucleocytoplasmic transport
oki03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109894140
03008 Ribosome biogenesis in eukaryotes
109894140
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
109894140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oki03019
]
109894140
03009 Ribosome biogenesis [BR:
oki03009
]
109894140
03016 Transfer RNA biogenesis [BR:
oki03016
]
109894140
03036 Chromosome and associated proteins [BR:
oki03036
]
109894140
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oki04147
]
109894140
04031 GTP-binding proteins [BR:
oki04031
]
109894140
Messenger RNA biogenesis [BR:
oki03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
109894140
Ribosome biogenesis [BR:
oki03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
109894140
Pre-60S particles
109894140
Transfer RNA biogenesis [BR:
oki03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
109894140
Chromosome and associated proteins [BR:
oki03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
109894140
Spindle formation proteins
109894140
Exosome [BR:
oki04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109894140
GTP-binding proteins [BR:
oki04031
]
Small (monomeric) G-proteins
Ran Family
Ran
109894140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
RNA_helicase
Gtr1_RagA
G-alpha
ArgoMid
AAA_24
Septin
AAA_33
Pox_A32
AAA_22
AAA_7
TsaE
Motif
Other DBs
NCBI-GeneID:
109894140
NCBI-ProteinID:
XP_020342967
Ensembl:
ENSOKIG00005014411
LinkDB
All DBs
Position
LG7:complement(8368237..8380236)
Genome browser
AA seq
213 aa
AA seq
DB search
MAEPDVQFKLVLCGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTTRGTIKYNV
WDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNK
VDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGDPNLEFVEMPALA
PPEVVMDASLAAQYENDLKVAAETALPDEDDDL
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaccagatgtacaatttaagctagtgttgtgtggagatggaggcacaggaaaa
accaccttcgtgaagaggcatttaacgggagagtttgagaagaaatacgttgcgactctg
ggagtagaggtgcaccccttggtcttccacaccactcgagggaccatcaagtacaacgtc
tgggacacagccggccaggagaagtttggggggctcagagatggctactacatacaggcc
cagtgtgcgatcatcatgttcgacgtgacatctcgcgtcacctacaagaacgtgcccaac
tggcaccgtgacctggtgcgtgtctgcgagaacatacccatagtcctgtgcggcaacaag
gtggacatcaaggacaggaaggtcaaagccaagagcatcgtgttccaccgcaagaagaac
cttcagtactacgacatttcagccaagagtaactacaactttgagaagcccttcctgtgg
ctggccaggaagctggtaggagaccccaacttggagtttgtggagatgcctgccctcgct
cccccagaggtcgtcatggacgcctccctggccgcgcagtacgagaacgaccttaaagtg
gccgcagaaacagcgctcccagatgaagatgatgacctttaa
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