Oncorhynchus kisutch (coho salmon): 109894351
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Entry
109894351 CDS
T09179
Name
(RefSeq) TNF receptor-associated factor 3-like
KO
K03174
TNF receptor-associated factor 3
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04620
Toll-like receptor signaling pathway
oki04621
NOD-like receptor signaling pathway
oki04622
RIG-I-like receptor signaling pathway
oki05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
109894351
04621 NOD-like receptor signaling pathway
109894351
04622 RIG-I-like receptor signaling pathway
109894351
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109894351
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
PEA2_C
DUF4559
NOCA1_mid
Sina_ZnF
BLOC1_2
zf-TRAF_2
CCDC39
DUF1664
zf-RING_UBOX
CCDC18_1st
zf-RING_6
SKAP
CALCOCO1
Rod_CreS
Pex17
RON4
Snapin_Pallidin
Spc7
FapA
Fez1
TolA_bind_tri
Motif
Other DBs
NCBI-GeneID:
109894351
NCBI-ProteinID:
XP_020343364
Ensembl:
ENSOKIG00005015369
LinkDB
All DBs
Position
LG7:complement(24433892..24451905)
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AA seq
573 aa
AA seq
DB search
MSAGRNADGRELQIPLQQCALSLAALSLAQRPWPSDHVAGFLPQHGGFRDHFVATPEPKY
CCESCKLVLCNPRQTECGHRFCETCISDQLSKPNPVCPEDKEPLFKDKVFRDVCCHREIM
ALRVYCRSEKNGCKEQISLQQVMDHLNVCPYFEVPCPLGKCKEKMMRKDIPEHLSWKCKH
RETTCEFCMQKMAMTELQKHKDTVCPSFPVACPNHCTFPSILRSKLTSHQHECPKAHVTC
SFIRFGCNFKGLNQDMRDHESSFASEHLRLMATRNTTLEAKVEDVKGELLERYKVLPGLS
SRLSETLSHYEEMREKNRQLDQKLNAMQELMSSHSEKLLEMELELRSLRSVREEVETLRG
TVESIRSRVATLEGGRGGANPATHTLETQLSRHDDMLSVHEIRLADMDLRFQVLETASFN
GMLIWKIRDYKRRKQEAVASKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFF
VVMRGEYDALLLWPFKQKVTLMLMDQGPARKHLGDAFKPDPNSSSFRRPTAEMNIASGCP
LFVAQTVLENGTYIKDDTIFIKVTVDTSDLPDP
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagggcggaatgcggacgggcgggagctgcagatccccctccagcaatgcgct
ctctccctggccgctctctccctggcccagcgcccctggcccagcgaccacgtggcaggc
ttcctaccccagcacgggggcttcagggaccacttcgtagccaccccggaacccaagtac
tgctgtgagtcctgcaagctggtgctctgcaaccccaggcagacagaatgcggacacagg
ttctgtgaaacctgtatctctgatcagctaagcaaaccaaatccagtatgtccagaagat
aaggaacctctgttcaaagacaaggtcttccgtgacgtatgctgccatagagagatcatg
gctctgagagtgtactgcaggagtgaaaagaacggctgtaaggagcagatcagtttacag
caggtcatggatcatttaaatgtgtgtccgtattttgaggtgccatgccctttgggaaag
tgcaaagagaagatgatgcgcaaagacattcctgaacatttgagttggaaatgtaaacac
agggagaccacctgtgaattctgcatgcagaagatggccatgactgagttacagaaacac
aaagacaccgtttgtccttcatttccggtggcctgccccaatcattgtactttcccctcc
atcttacggagcaaactgacgagtcatcaacatgagtgtcccaaggctcatgtcacctgc
tcctttatccgctttggatgcaatttcaagggtctcaaccaagacatgagggaccatgaa
tctagctttgcctctgaacacctgcggttgatggcaaccagaaacactacactggaggcc
aaggtggaggatgttaaaggagagcttctagagcggtacaaggttctgccgggcctgagc
agccgtctgtctgaaacattatctcactacgaggagatgagggagaagaatagacagctg
gaccagaagctcaatgccatgcaggagttgatgagttcccactctgagaagcttctggag
atggagctggagctgaggtctctgaggtctgtccgagaggaggtggagaccctccgagga
accgtggagagcatccgctccagagtcgccactctagaaggagggcggggcggggccaac
ccagccacacacacactagagacacagctctcccgtcacgacgacatgctgagcgtccat
gagatccgactagcagacatggacctgcgcttccaggtcctagagactgcctccttcaat
gggatgctcatctggaagatccgtgactacaagcggcggaaacaagaagccgtggcgtca
aagaccctgtctctctacagccagcctttctacactggctactttggctacaagatgtgt
gcccgggtctacctgaacggagacggcatggggaaaggaacccacttgtcgctgttcttc
gtggtgatgcgtggcgagtacgatgcccttctgctctggccctttaagcagaaggtgacc
ttgatgctgatggatcagggcccagccagaaagcacttaggggatgcctttaaaccagac
cccaatagcagcagcttcagacggcccacggcagagatgaacatagcctcaggctgcccg
ctgttcgtggcccagactgtgctggagaacggtacttacatcaaggacgataccatcttc
attaaggtcacagtagatacgtctgacctccctgacccctga
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