Oncorhynchus kisutch (coho salmon): 109894521 Help Entry 109894521         CDS       T09179                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism oki  Oncorhynchus kisutch (coho salmon) Pathway oki04115   p53 signaling pathway oki04145   Phagosome oki04148   Efferocytosis oki04350   TGF-beta signaling pathway oki04510   Focal adhesion oki04512   ECM-receptor interaction oki04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:oki00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     109894521   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     109894521  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     109894521    04148 Efferocytosis     109894521   09143 Cell growth and death    04115 p53 signaling pathway     109894521   09144 Cellular community - eukaryotes    04510 Focal adhesion     109894521   09142 Cell motility    04820 Cytoskeleton in muscle cells     109894521  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:oki04131]     109894521   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:oki00536]     109894521 Membrane trafficking [BR:oki04131]  Endocytosis   Phagocytosis    Opsonins     109894521 Glycosaminoglycan binding proteins [BR:oki00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    109894521 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_ADAMTS VWC2L_2nd EGF_3 TSP1_CFP_C cEGF Laminin_G_3 TSP1_CCN EGF Laminin_G_2 Motif Other DBs NCBI-GeneID:  109894521 NCBI-ProteinID:  XP_020343666 Ensembl:  ENSOKIG00005017850 LinkDB All DBs Position LG7:complement(34392518..34401996) Genome browser AA seq 1172 aa AA seqDB search MKLIGVFLLLVLWTCEGSRVAESGDDNGVYDLFELVKVNKRHQGVTLVKGADPYSPAYKV LNADLIPPVPEISFRDLIDSVQAERGFLLLVNFKQFKKTRGSILTVEKNDGSGPIFEIIS NGKAQTLDVVYSTGNKQQVVSIEDADLATGHWKNITLFIQEDRAQLFVGCEEINISEIDV PIQKVLTHEVADIARLRIGKGAVKDRFMGVLQNVRFVFGTTLEAIMRNKGCQSSETLADV MTLDNPVNGSSPAIRTDYTGHKSKEIQQVCGFSCEDITSMFKELKGLGVVVKQLSNELNR VNKESTLLMNQMRIHRGVCLHNGIVHKDKDEWTVDGCTECTCQNSATVCRKISCPLMPCA NATVPDGECCPRCGTPSDYAEDGWSPWSEWTHCSVSCGRGIQQRGRSCDRINSNCEGTSV QTRDCYPQECDKRFKQDGGWSHWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGRDCQGQG RETEVCQKSPCPIDGVWGPWSLWDTCSVTCGGGFQTRQRLCNNPTPKYRGKECQGDGKTS QLCGKEDCPIDGCLSNPCFAGAKCTSFDDGSWKCGACPVGYTGDGINCKDIDECKEVRDA CFTLNGVHRCENTEPGYNCLACPPRYSGQQPFGRGVEQATAKKQVCTPRNPCQDGSHDCN KNANCIYLGQFSDTMFRCECKPGYAGNGHICGDDTDLDGWPNKDLLCVENATYHCKKDNC PNLPNSGQEDHDKDGLGDACDHDDDNDGIPDDRDNCPMVYNPAQYDVDRDDVGDRCDNCV HESNPDQVDTDNNGEGDACAIDIDGDGILNERDNCPYVYNVDQRDTDGDGVGDHCDNCPL ENNPDQIDSDSDRVGDKCDNNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDD DNDGIPDDKDNCRLAFNPDQLDSDGDGRGDVCKDDFDQDNILDIYDVCPENFAISETDFR RFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFNAVDFSGTFFINTDR DDDYAGFVFGYQSSSRFYVVMWKQITQTYWSHTPTRAQGYSGVSIKVVNSTTGPGEHLRN ALWHTGDTAGQVRTLWHDPKNIGWKDYTAYRWHLIHRPKSGLIRVVMYEGKRIMADSGNI YDNTYAGGRLGMYVFSQEMTYFSDLKYECKDS NT seq 3519 nt NT seq  +upstreamnt  +downstreamnt atgaagttgataggagtatttctccttttggtgctttggacttgtgagggcagccgggta gcagagagtggagatgataacggtgtatacgacctattcgagcttgtgaaagtgaacaag aggcaccaaggagttaccttggtaaaaggcgcagatccctacagcccagcctataaggtc ttgaacgcagacctgatccccccggttcccgagatctccttcagggacctcattgattca gtacaagctgaaagaggattccttctcctcgtcaacttcaagcagttcaagaaaaccagg ggtagtattttgactgtggagaagaatgacggatcaggaccgatattcgaaattatttct aatggcaaggcgcaaactctggatgtggtatactccaccgggaacaagcaacaggtagtg tccatagaagatgcagatctagcgacaggacattggaagaatatcacgctgttcattcag gaagatcgtgcccagctgttcgtaggatgtgaagagatcaatatatccgaaatagacgtg cccatccaaaaggtcctgacgcatgaggttgctgacattgcccgtctgagaattggaaaa ggagctgtgaaagacagatttatgggagtgcttcagaacgtgcgcttcgtttttggaacc acgttggaggcaatcatgcgcaataagggatgccaaagctctgaaacattggctgatgtc atgaccctggacaacccagtcaatgggtctagcccagcaataaggactgattacactggc cacaaaagcaaagaaattcagcaggtctgtggcttttcctgtgaggatatcaccagcatg ttcaaggagctcaagggacttggcgtggttgttaagcagctgtcaaacgagctcaacaga gtgaataaggagagcactctgctcatgaaccagatgagaatccaccgtggggtctgtctt cacaacggcattgtgcacaaggacaaagatgagtggaccgtggacggctgcacagagtgt acctgccagaactctgccactgtgtgtcgcaaaatctcttgtcccctgatgccctgtgcc aacgccaccgtgcccgatggagagtgctgcccacgttgtggaaccccgagtgactatgct gaggatggctggtccccctggtctgaatggactcattgttctgtgtcttgtggacgggga atccagcagcgaggtcgatcatgcgaccgcatcaacagcaattgcgagggcacctctgtg cagacccgcgactgctaccctcaggaatgtgacaagcgcttcaagcaggatggtggttgg agccactggtctccctggtcctcctgctctgtgacctgtggtgaaggagtcatcacccgc attcgcctttgcaactccccaactccccagatgggaggcagagactgccaaggacagggc agagagaccgaggtctgccagaaatcaccatgtccaattgacggagtctggggaccctgg tctttatgggacacctgctctgtcacctgtggaggtggattccagactcgccagcgtctt tgtaacaaccccacccccaaatacagaggaaaggaatgtcagggcgatggcaaaacatcc caactgtgtggaaaagaggactgccctattgatggctgtctgtccaacccctgctttgct ggtgctaagtgtaccagctttgatgatggttcctggaagtgtggcgcatgcccagtgggc tacaccggagacggcatcaactgcaaggacatcgatgagtgcaaggaggtccgtgacgca tgcttcacactcaacggagtccaccgctgtgaaaacactgagcctggttacaactgcctt gcctgcccccctcgctactcaggacaacagcccttcgggagaggagtggagcaggccaca gccaagaaacaggtgtgcacaccccgtaacccctgccaagacggcagccatgattgcaac aagaatgccaactgtatctacctgggtcagttcagcgacactatgttccgctgtgagtgc aaaccaggttacgctggcaatggtcacatctgtggagatgacactgacctggatggatgg cccaacaaagacctcctatgtgtggagaatgccacctaccactgcaagaaggacaactgt ccaaaccttcccaactctggacaggaggatcacgacaaagatgggcttggtgacgcttgc gatcacgatgatgacaatgatgggatccctgatgatagggacaactgcccaatggtctac aaccccgctcagtatgatgtggacagagatgacgttggtgatcgatgtgataactgtgtg catgagagcaaccccgaccaagtcgacacagacaacaacggagagggggatgcctgtgct attgacattgacggtgatggcattctaaatgagagggacaactgcccatacgtctacaat gtggaccagagagacactgacggggatggagtgggagaccactgcgacaattgccctctt gaaaacaacccagaccagattgactctgactcagaccgtgtgggagacaagtgcgacaac aaccaggacattgatgaggacggtcatcagaacaacttggacaactgtccctatatcccc aatgccaaccaggccgaccacgacaaagatggcaagggtgatgcctgtgaccacgatgat gacaacgacggtatccctgacgacaaggacaactgtaggctggcctttaaccctgaccag ctggactctgatggtgatggtcgtggagatgtttgcaaagatgactttgaccaagacaac attcttgatatctacgatgtgtgccctgagaactttgccatcagtgagacggacttccgc aggttccagatggtaccactagaccccaagggaacctcccagatcgaccccaactgggtg gtccgtcaccagggcaaagaactggtgcagaccgtcaactgtgaccctggcatcgctgtt gggttcgatgagttcaacgcagtggacttcagtggaacattctttatcaacacagacagg gacgatgactatgctggatttgtgtttgggtaccagtccagctccaggttctacgtggta atgtggaagcagatcacacagacctactggtcccacacgccgaccagagctcagggctac tccggagtgtccatcaaagtggtcaactccaccacaggacctggggagcatctgaggaac gccctctggcacaccggtgacactgctggacaggtgcgtactctgtggcacgaccccaag aacatcggctggaaagactacactgcctacagatggcacctgatccacaggcccaagtct ggactcatcagagttgtgatgtatgaaggcaagagaatcatggccgattccggaaatatc tacgacaatacctatgctggtggaagactaggcatgtatgtcttctctcaggagatgaca tacttctcagacctcaaatatgaatgcaaagattcttaa

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