Oncorhynchus kisutch (coho salmon): 109894521 Help Entry 109894521         CDS       T09179                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism oki  Oncorhynchus kisutch (coho salmon) Pathway oki04115   p53 signaling pathway oki04145   Phagosome oki04148   Efferocytosis oki04350   TGF-beta signaling pathway oki04510   Focal adhesion oki04512   ECM-receptor interaction oki04518   Integrin signaling oki04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:oki00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     109894521   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     109894521    04518 Integrin signaling     109894521  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     109894521    04148 Efferocytosis     109894521   09143 Cell growth and death    04115 p53 signaling pathway     109894521   09144 Cellular community - eukaryotes    04510 Focal adhesion     109894521   09142 Cell motility    04820 Cytoskeleton in muscle cells     109894521  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:oki04131]     109894521   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:oki00536]     109894521 Membrane trafficking [BR:oki04131]  Endocytosis   Phagocytosis    Opsonins     109894521 Glycosaminoglycan binding proteins [BR:oki00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    109894521 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_ADAMTS VWC2L_2nd EGF_3 TSP1_CFP_C cEGF Laminin_G_3 TSP1_CCN EGF Laminin_G_2 Motif Other DBs NCBI-GeneID:  109894521 NCBI-ProteinID:  XP_020343666 Ensembl:  ENSOKIG00005017850 LinkDB All DBs Position LG7:complement(34392518..34401996) Genome browser AA seq 1172 aa AA seqDB search MKLIGVFLLLVLWTCEGSRVAESGDDNGVYDLFELVKVNKRHQGVTLVKGADPYSPAYKV LNADLIPPVPEISFRDLIDSVQAERGFLLLVNFKQFKKTRGSILTVEKNDGSGPIFEIIS NGKAQTLDVVYSTGNKQQVVSIEDADLATGHWKNITLFIQEDRAQLFVGCEEINISEIDV PIQKVLTHEVADIARLRIGKGAVKDRFMGVLQNVRFVFGTTLEAIMRNKGCQSSETLADV MTLDNPVNGSSPAIRTDYTGHKSKEIQQVCGFSCEDITSMFKELKGLGVVVKQLSNELNR VNKESTLLMNQMRIHRGVCLHNGIVHKDKDEWTVDGCTECTCQNSATVCRKISCPLMPCA NATVPDGECCPRCGTPSDYAEDGWSPWSEWTHCSVSCGRGIQQRGRSCDRINSNCEGTSV QTRDCYPQECDKRFKQDGGWSHWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGRDCQGQG RETEVCQKSPCPIDGVWGPWSLWDTCSVTCGGGFQTRQRLCNNPTPKYRGKECQGDGKTS QLCGKEDCPIDGCLSNPCFAGAKCTSFDDGSWKCGACPVGYTGDGINCKDIDECKEVRDA CFTLNGVHRCENTEPGYNCLACPPRYSGQQPFGRGVEQATAKKQVCTPRNPCQDGSHDCN KNANCIYLGQFSDTMFRCECKPGYAGNGHICGDDTDLDGWPNKDLLCVENATYHCKKDNC PNLPNSGQEDHDKDGLGDACDHDDDNDGIPDDRDNCPMVYNPAQYDVDRDDVGDRCDNCV HESNPDQVDTDNNGEGDACAIDIDGDGILNERDNCPYVYNVDQRDTDGDGVGDHCDNCPL ENNPDQIDSDSDRVGDKCDNNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDD DNDGIPDDKDNCRLAFNPDQLDSDGDGRGDVCKDDFDQDNILDIYDVCPENFAISETDFR RFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFNAVDFSGTFFINTDR DDDYAGFVFGYQSSSRFYVVMWKQITQTYWSHTPTRAQGYSGVSIKVVNSTTGPGEHLRN ALWHTGDTAGQVRTLWHDPKNIGWKDYTAYRWHLIHRPKSGLIRVVMYEGKRIMADSGNI YDNTYAGGRLGMYVFSQEMTYFSDLKYECKDS NT seq 3519 nt NT seq  +upstreamnt  +downstreamnt atgaagttgataggagtatttctccttttggtgctttggacttgtgagggcagccgggta gcagagagtggagatgataacggtgtatacgacctattcgagcttgtgaaagtgaacaag aggcaccaaggagttaccttggtaaaaggcgcagatccctacagcccagcctataaggtc ttgaacgcagacctgatccccccggttcccgagatctccttcagggacctcattgattca gtacaagctgaaagaggattccttctcctcgtcaacttcaagcagttcaagaaaaccagg ggtagtattttgactgtggagaagaatgacggatcaggaccgatattcgaaattatttct aatggcaaggcgcaaactctggatgtggtatactccaccgggaacaagcaacaggtagtg tccatagaagatgcagatctagcgacaggacattggaagaatatcacgctgttcattcag gaagatcgtgcccagctgttcgtaggatgtgaagagatcaatatatccgaaatagacgtg cccatccaaaaggtcctgacgcatgaggttgctgacattgcccgtctgagaattggaaaa ggagctgtgaaagacagatttatgggagtgcttcagaacgtgcgcttcgtttttggaacc acgttggaggcaatcatgcgcaataagggatgccaaagctctgaaacattggctgatgtc atgaccctggacaacccagtcaatgggtctagcccagcaataaggactgattacactggc cacaaaagcaaagaaattcagcaggtctgtggcttttcctgtgaggatatcaccagcatg ttcaaggagctcaagggacttggcgtggttgttaagcagctgtcaaacgagctcaacaga gtgaataaggagagcactctgctcatgaaccagatgagaatccaccgtggggtctgtctt cacaacggcattgtgcacaaggacaaagatgagtggaccgtggacggctgcacagagtgt acctgccagaactctgccactgtgtgtcgcaaaatctcttgtcccctgatgccctgtgcc aacgccaccgtgcccgatggagagtgctgcccacgttgtggaaccccgagtgactatgct gaggatggctggtccccctggtctgaatggactcattgttctgtgtcttgtggacgggga atccagcagcgaggtcgatcatgcgaccgcatcaacagcaattgcgagggcacctctgtg cagacccgcgactgctaccctcaggaatgtgacaagcgcttcaagcaggatggtggttgg agccactggtctccctggtcctcctgctctgtgacctgtggtgaaggagtcatcacccgc attcgcctttgcaactccccaactccccagatgggaggcagagactgccaaggacagggc agagagaccgaggtctgccagaaatcaccatgtccaattgacggagtctggggaccctgg tctttatgggacacctgctctgtcacctgtggaggtggattccagactcgccagcgtctt tgtaacaaccccacccccaaatacagaggaaaggaatgtcagggcgatggcaaaacatcc caactgtgtggaaaagaggactgccctattgatggctgtctgtccaacccctgctttgct ggtgctaagtgtaccagctttgatgatggttcctggaagtgtggcgcatgcccagtgggc tacaccggagacggcatcaactgcaaggacatcgatgagtgcaaggaggtccgtgacgca tgcttcacactcaacggagtccaccgctgtgaaaacactgagcctggttacaactgcctt gcctgcccccctcgctactcaggacaacagcccttcgggagaggagtggagcaggccaca gccaagaaacaggtgtgcacaccccgtaacccctgccaagacggcagccatgattgcaac aagaatgccaactgtatctacctgggtcagttcagcgacactatgttccgctgtgagtgc aaaccaggttacgctggcaatggtcacatctgtggagatgacactgacctggatggatgg cccaacaaagacctcctatgtgtggagaatgccacctaccactgcaagaaggacaactgt ccaaaccttcccaactctggacaggaggatcacgacaaagatgggcttggtgacgcttgc gatcacgatgatgacaatgatgggatccctgatgatagggacaactgcccaatggtctac aaccccgctcagtatgatgtggacagagatgacgttggtgatcgatgtgataactgtgtg catgagagcaaccccgaccaagtcgacacagacaacaacggagagggggatgcctgtgct attgacattgacggtgatggcattctaaatgagagggacaactgcccatacgtctacaat gtggaccagagagacactgacggggatggagtgggagaccactgcgacaattgccctctt gaaaacaacccagaccagattgactctgactcagaccgtgtgggagacaagtgcgacaac aaccaggacattgatgaggacggtcatcagaacaacttggacaactgtccctatatcccc aatgccaaccaggccgaccacgacaaagatggcaagggtgatgcctgtgaccacgatgat gacaacgacggtatccctgacgacaaggacaactgtaggctggcctttaaccctgaccag ctggactctgatggtgatggtcgtggagatgtttgcaaagatgactttgaccaagacaac attcttgatatctacgatgtgtgccctgagaactttgccatcagtgagacggacttccgc aggttccagatggtaccactagaccccaagggaacctcccagatcgaccccaactgggtg gtccgtcaccagggcaaagaactggtgcagaccgtcaactgtgaccctggcatcgctgtt gggttcgatgagttcaacgcagtggacttcagtggaacattctttatcaacacagacagg gacgatgactatgctggatttgtgtttgggtaccagtccagctccaggttctacgtggta atgtggaagcagatcacacagacctactggtcccacacgccgaccagagctcagggctac tccggagtgtccatcaaagtggtcaactccaccacaggacctggggagcatctgaggaac gccctctggcacaccggtgacactgctggacaggtgcgtactctgtggcacgaccccaag aacatcggctggaaagactacactgcctacagatggcacctgatccacaggcccaagtct ggactcatcagagttgtgatgtatgaaggcaagagaatcatggccgattccggaaatatc tacgacaatacctatgctggtggaagactaggcatgtatgtcttctctcaggagatgaca tacttctcagacctcaaatatgaatgcaaagattcttaa

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