KEGG   Oncorhynchus kisutch (coho salmon): 109895810
Entry
109895810         CDS       T09179                                 
Name
(RefSeq) lysine-specific demethylase 2B isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    109895810
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:oki03000]
    109895810
   04121 Ubiquitin system [BR:oki04121]
    109895810
   03036 Chromosome and associated proteins [BR:oki03036]
    109895810
Enzymes [BR:oki01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     109895810
Transcription factors [BR:oki03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    109895810
Ubiquitin system [BR:oki04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     109895810
Chromosome and associated proteins [BR:oki03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    109895810
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     109895810
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like F-box PHD LRR_At1g61320_AtMIF1 Viral_cys_rich
Other DBs
NCBI-GeneID: 109895810
NCBI-ProteinID: XP_020345403
Ensembl: ENSOKIG00005028341
LinkDB
Position
LG8:34654218..34676170
AA seq 778 aa
MALSLSADEEDYESESEQQHAANRPKPKMGTSAVVKLPSNRSASGARRRRTRCRKCEACL
RTECGDCHFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCVVCGEAGKEDSLEEEEDK
FNIMLMECSICSEIVHPNCLKVKDASGVVNDELPNCWECPKCNYAGKTGKVCKQKRGPGF
KYASNLPGSLLREQKVVKEEGESTSTSTVKRKPERDETPRHRPEEWEPLHRQPPVLSPST
LPRPRPEDKLRKKRKLFDDDYEEDFDVRKKGKSDGHLFLNQIKTEEEEVDEEEKASLYRQ
GLERRGRLGDTEEEAEYEDDEDTKTSLPRPPLKTPVLDSDQSHCSSPWAGPSSEGGSEPQ
EKGPRPKACRKRRLPNKELSKELSKALNQEIQKTEDCLANENRQPLKVEPESENEEPKRS
FRNGSDLGGERPHLWTKEINCTPWELRHFYPGQITPLGFNRSSPGTRPLPPRSPPKCVQM
ERHVIRPPPISPPPDRLPLVDGKTHAVQREVWVKIFGHITHKELCVCMRVCKTWNRWCCD
KRLWTIIDLNRCKSITPLMLSGIIRRQPLSLDLSWTNISKKQLSWLINRLPGLRVLLLSG
CSWVAVSALCTSSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQLDNRCKLRNVMDL
RLAGLDITDASLRLIIRHMPVLSQLDLSYCNHVNDQSVNLLTAAGTTTRDSLTEINLSVC
NRVTDHSLTFFKRCGSICHIDLRYCKQVTKTACEQFIAEMSVSVQFGLKEDKLLQKLS
NT seq 2337 nt   +upstreamnt  +downstreamnt
atggccttgtcactgagtgcagatgaagaggattatgaatcagaatctgaacagcagcat
gcagccaaccggccaaagcccaagatggggacgtcagcagtggtcaaactgccgtcgaat
cgcagtgcgtctggcgccagacgcaggagaacacgctgccgaaagtgtgaggcgtgcctt
cgaaccgagtgtggagactgtcacttctgtaaagacatgaagaagtttggaggacctggg
cgcatgaagcagtcctgtatcatgaggcagtgcattgcacctgtcctgccccacacggct
gtgtgtgtcgtgtgtggagaagcaggtaaggaggactccctggaggaagaggaggacaag
ttcaacatcatgctcatggagtgctccatctgcagtgagattgttcaccccaactgctta
aaggttaaagatgcctctggcgtggtgaatgatgaacttcccaactgttgggaatgtccc
aaatgcaactacgctgggaaaacaggaaaagtctgcaagcaaaaaaggggaccagggttc
aagtacgcgtccaacctccctggctctctgctgagggagcagaaggtggtcaaggaggag
ggcgagtccacctctacgtctacagtcaagaggaagcctgagagggatgagactcccaga
cacagacctgaggaatgggagccccttcacagacaaccccctgtcctgtcccctagcacc
ctgcctcggcccagacctgaggacaaactgaggaagaagaggaagctcttcgacgatgac
tatgaagaggactttgatgtgaggaagaagggaaagtcagatggacatctgttccttaat
cagatcaagactgaagaggaggaggtggatgaagaggagaaggcctctctgtaccggcaa
ggcctggagaggagagggcgtttaggcgataccgaggaggaggcagagtacgaggatgac
gaggacacaaagacaagcctgcccaggcctcctctcaaaactcctgttctagacagtgac
cagtctcactgcagctctccatgggctggccccagtagtgaggggggcagtgaaccccag
gagaagggcccacgtcccaaagcgtgccgcaaacgccgattaccaaacaaagagctgagt
aaagagctgagcaaagcactgaaccaggagatccagaagaccgaggactgccttgccaat
gagaaccgccagcccctgaaggtggagccagagagtgagaatgaagagccaaagaggagc
ttccgcaatggcagtgacctaggaggggagcggccacacctctggaccaaggaaattaac
tgcactccctgggagctgcgccacttctaccccggccaaatcacccctctgggcttcaac
aggagctcccctggcacccggccgctgcccccacgctccccacccaagtgtgtccaaatg
gagcgccacgtcatccggcctccccccatcagccccccgccagatagattgcccctggtg
gacgggaaaacccacgcggtgcagcgagaggtctgggtgaagatcttcggacacatcaca
cacaaggagctgtgtgtctgcatgcgtgtctgcaaaacatggaaccgatggtgttgtgat
aaaagactgtggaccataatcgatctgaaccgctgtaaatctatcactccccttatgctg
agtggcatcatccgcagacagcccctctcactggacctcagctggaccaacatctccaag
aagcaactaagctggcttataaaccgcttaccaggtctgcgggtgttgctgctctccggg
tgctcgtgggtggctgtgtctgccctctgcacatctagctgccctctgctgcgcaccctg
gatgtgcagtgggtggaggggctcaaagatgcccagatgagggacctgctctcgcctccg
accgacaacagaccaggccagttggacaaccgttgtaagctgaggaacgttatggacttg
cgtctggccggactggacatcacagacgcctctctgcgtctgattatcagacatatgccg
gtactttcacaactggacctgagctactgcaaccacgtcaacgaccagtcggtcaacctg
ctgacggccgcagggaccacaaccagggactccctcacagagatcaacctgtcagtttgt
aatagggtgacagaccattcccttaccttcttcaagcgctgtggaagcatctgtcacatt
gacctacgctactgcaaacaggtgaccaagacggcctgtgaacagttcatagctgagatg
tctgtaagtgtacagtttggcctcaaagaggacaaattactgcagaaactcagctag

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