KEGG T09179: 109896892

Oncorhynchus kisutch (coho salmon): 109896892

Entry

109896892         CDS       T09179

Name

(RefSeq) NACHT, LRR and PYD domains-containing protein 1b allele 3 isoform X1

K12798

NACHT, LRR and PYD domains-containing protein 1

Organism

oki Oncorhynchus kisutch (coho salmon)

Pathway

oki04621

NOD-like receptor signaling pathway

Brite

KEGG Orthology (KO) [BR:oki00001]
09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    109896892
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oki04131]
    109896892
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:oki04054]
    109896892
Membrane trafficking [BR:oki04131]
Autophagy
  Other autophagy associated proteins
   TRIM-directed selective autophagy
    109896892
Pattern recognition receptors [BR:oki04054]
Cytoplasmic pattern recognition receptors
  NOD-like receptors
   109896892

SSDB

Motif

Pfam:

FIIND UPA-FIIND CARD

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

UniProt:

LinkDB

Position

LG9:complement(22350462..22359969)

AA seq 422 aa
MATLKQQDTLMECLSCSHLKTAEIWIALEPLVSTENEISIYRLESIAGRYECTISGLRWV
CESKVTLLYHFSSWDPHRAVLQSMGYRQAGPLLDIKIIEGKLKEVHLPHFACFGARMDIN
YTEQDIVLFTWEFSIHMKINVLIKLIMFLSILGVGDRYDPSIKQKVRVLHVEGRGVSIEQ
VDKVTRFHVKILHPSFSLRGVILQALGCSVHCDLQIYRAKTAHLTLHAYLMPCDPALTQA
VEKQEKCHGSTRILKPRPEKSQWLTSDFYLTTSCPSDVNPRRLELAHVDPPNFFEVFIRD
ADLDFSLNLSCKSRKQTIWNHEIRAAEYRGSILTSDQHFVDLHQTALIDRVSQVGPILDR
LLKSGVITADGYSDVIAERNNQKKMRALFDGPLKGCGPECKDRFLEILTELEPYLINHLK
LE

NT seq 1269 nt +upstreamnt +downstreamnt
atggccacgttaaaacaacaagatactctgatggaatgcttgagttgcagccatcttaag
accgcagaaatttggattgcgcttgagccgttagtgtctacagaaaatgagatttcaatc
tacagacttgaatctatcgcaggacgctatgagtgcacaatatcagggctgcgctgggta
tgtgagagcaaagtcacacttctgtaccacttcagctcttgggatcctcacagggcagtg
ctacaaagcatggggtacaggcaagcaggccccctactggacatcaaaatcattgaagga
aaactgaaagaagtgcatctgccacattttgcctgttttggtgcacgtatggatatcaac
tatactgaacaagacattgttttatttacctgggaattctcaatacatatgaaaataaat
gttttaatcaaactgataatgtttctgtccattttaggggttggagatcgttatgatccc
tctataaagcagaaagtgagagttcttcatgtagaaggccgtggtgtgtccatagaacaa
gtggataaggtcacccgcttccacgtcaagattctccatccatctttctctctgagaggt
gttatcctgcaggcattagggtgttccgtgcactgtgacttgcagatctaccgagccaag
acagcacacctcacgctacatgcttatctgatgccatgtgatcctgcactaacacaggca
gtggagaaacaggagaagtgtcatggatccacaaggatcctaaaaccaagaccagagaag
tcccaatggttgactagtgatttctacctcacaacatcctgtccttctgatgttaaccct
cgtagattggagctcgcacatgttgacccaccaaacttctttgaggtgtttataagagac
gcagatttagacttcagtctgaacctaagctgtaaaagtcgtaaacaaaccatatggaac
cacgaaatacgagcagctgaatacaggggttccatcttgacctcagaccagcactttgtg
gacctccaccagacagccctgattgacagagtgagccaagtcggtcccatcttggacaga
ctcctgaagagtggagtcatcactgctgatggctacagtgacgtgatagctgaaagaaat
aaccagaagaagatgagggcactctttgatgggcccttaaaagggtgtggccccgaatgc
aaagatcggttcttagagatcctgacagagctggagccatacctaatcaatcacctgaag
ctggaatga

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