Oncorhynchus kisutch (coho salmon): 109899190
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Entry
109899190 CDS
T09179
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oki04812
]
109899190
Cytoskeleton proteins [BR:
oki04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
109899190
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT
HEAT_EZ
Adaptin_N
Arm_2
RIX1
Motif
Other DBs
NCBI-GeneID:
109899190
NCBI-ProteinID:
XP_020349832
Ensembl:
ENSOKIG00005000493
LinkDB
All DBs
Position
LG1:complement(13343396..13355535)
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AA seq
760 aa
AA seq
DB search
MMTMDPLKSAISIGNVEETSLALPSDNKLRSKQQRVLDQVQTIKRGKSKYSKNGSLSSPT
KSPTSPMYVSVFTDSIKSPTSPNGIVFSNGTNGLSRTLSHEQSTKRMVLSSKGSTVQRNM
SSSSQWERRLPLSPPIARGQRNSSRSVPDADPFPFPTTTQRPAQAPASALQQFQSSAPAR
QLQSNRSSFFLTERGNSQFVSNGNGPSQVIVNSNDVQKRQSQLIGTRQTKSSGQITSSHT
RIERAPSNPSMAEPKISVVKSKIEAGTNDYGQLADITMAEAVQYLSSGDVNYQHYGASFI
QHSTYSEDKAKQEVLRLKGIPPLVNLLRSPSSQVQQTASAALRNLAFKDAGNKEEVQRCG
GITESLALLRDTDSTETQKQLTGLLWNLSSADSLKPELVRSALPVLTETVVVPYTGGVDE
TNKNLDPEVFYHATACLRNLSCATQSNRQAMRNCRGLIDSLGSYVQECVASERPDDKSVE
NCVCVLHNLSFQLESEAPALFSRITALAGTISRANASAETGPIGCFSQQSSKVQEQENHF
DYPVMEEQHPKGAGWLFHSKTMQSYLSLLRSSQREDTLEACCGALQNLTANQGIVSRVMS
QTIVQKLNGLPEISSLLQSSNPSLQKTAVALVGNLAKNQRLQSIMARQTFPELVGILSSW
TKEGTESDDTLAMACQTSHSLLMKEPELGKRLLSNNLVNSLNDLSKNRLFPKASKAAGVL
LYSLWSEKDIQGFLKKQGMNKGSFVNDITSVAHRSVQVVE
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgatgacaatggacccgttgaaatcggccatatccattgggaatgtggaggagacatct
cttgctttgccgtccgataacaaacttcggtccaaacagcagcgtgtcttggatcaggtg
caaaccattaagaggggcaagtcgaagtacagtaaaaatggatctttatcgtcgccaacg
aagtcgccaacgagtcctatgtacgtcagcgtattcactgactccattaagtcacctacc
agtcccaatggaattgtcttctcgaatggtacaaatggcctctcaagaacgcttagccat
gagcagagcaccaagcgaatggtactgtcctccaagggatctactgttcagagaaacatg
agcagctccagccagtgggagagacgattacctctcagtccccccatagccaggggtcag
cgcaacagcagccgcagtgtgcctgatgcagaccccttccccttccccaccaccacacag
cgccctgcccaggccccggcttcagccctgcagcagtttcagtcctcagcccccgcccgg
cagctccaatccaacagatccagcttcttccttactgagaggggtaacagccagttcgtc
tccaatggcaatggcccctctcaggtcattgtcaacagcaacgatgtgcagaaaaggcag
agccagttgattggcacccgtcagacgaaaagcagtggccagattaccagcagccacact
cgtattgagagggcaccatcgaacccctccatggccgagcccaagatatcagtggtcaag
agcaagattgaagcagggacgaatgattatggccagcttgctgatattaccatggcggag
gcggtgcagtacctgtccagtggagatgtgaactaccagcactatggcgcctcattcatc
caacactctacctactcagaggacaaggccaagcaggaggtgttgcggctcaaagggatc
cctcctctggtgaacctgctgaggagtcccagttcccaggtccaacagacagcctcggcc
gccctgcggaaccttgcctttaaagatgcgggcaacaaggaggaggtccagcgctgtggg
ggcatcactgagtccctggccctgctccgagacacagactctaccgagacacagaaacaa
ctcacaggtctcctttggaacctgtcgtctgcagacagtctgaagccggagcttgtgcgt
agcgctctgcctgttctgactgagactgtggtagtaccttacacaggaggagtagatgag
accaacaagaacctggacccagaggtcttctaccatgctacagcatgtctacgaaatctg
agctgtgcgacgcaaagcaacaggcaggccatgcgtaactgtcgaggcctcatcgactct
ctgggcagttacgtccaggagtgtgtagcatcagagaggccagatgacaagtctgtggag
aactgtgtctgtgtcctacacaacctgagcttccagctggagagtgaggccccggccctg
ttcagccggatcactgccctggccgggaccatcagccgggcaaacgcctcagctgagacc
ggccccatcggctgtttcagccaacagagcagcaaggtccaggagcaggagaatcacttt
gactaccccgtgatggaggagcagcatcctaaaggagcgggctggctcttccactccaag
actatgcagagttacctgtctctgctgaggtccagccagagagaagacaccctggaggcc
tgctgtggagccctgcagaacctcaccgctaaccaaggcattgtttctagagtgatgagc
cagaccattgtccagaagctgaacggcttgcctgaaatctcttccctgctgcaatcctcc
aaccccagcctacagaagactgctgtggctttggtgggaaacctagccaagaaccaacgc
cttcagagcatcatggcccgacagaccttcccagagctggttggcatcctcagctcatgg
accaaggaagggacagagtctgacgacaccctggctatggcgtgccaaaccagccacagt
cttctgatgaaggagcctgagctggggaagcgcctgctgagcaacaacctggtcaactca
ctcaacgacctgagcaaaaacaggcttttcccaaaggcaagcaaagctgcaggtgtgctc
ctctacagcctctggtcagagaaggacatacagggtttcctaaaaaagcaagggatgaat
aagggttcctttgtgaatgacatcaccagcgtggctcacaggtctgtgcaggtcgttgag
taa
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