KEGG   Oncorhynchus kisutch (coho salmon): 109899730
Entry
109899730         CDS       T09179                                 
Name
(RefSeq) survival of motor neuron-related-splicing factor 30-like
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109899730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oki03041]
    109899730
Spliceosome [BR:oki03041]
 Complex A
  U2 snRNP components
   U2 related factors
    109899730
 Complex B
    109899730
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    109899730
SSDB
Motif
Pfam: SMN_Tudor TUDOR DUF2067 RskA_C DUF2730
Other DBs
NCBI-GeneID: 109899730
NCBI-ProteinID: XP_020350790
Ensembl: ENSOKIG00005045788
LinkDB
Position
LG11:35740021..35751275
AA seq 236 aa
MSEDLLKQLGSYKAQLQQVEAALSTDPENEDLLKLQKDLSEVIDLTKDLLTSQPSEGTAT
ANRSDAAPLKHRWSVGDRCMTVWSQDGQVYEAEIEEIDGENGTAAITFSGYGNAEVVPLQ
NLKPAEEGKHSEDDGKSKSRKEQMADQREYKKKKAQKKVLRMKELEQEREDQKSKWQSFN
NKAYNKNKKGQVKRSIFASPESVNGKVGVGTCGIADKPMTTYHDTSKYNVRHLMPQ
NT seq 711 nt   +upstreamnt  +downstreamnt
atgtcagaggatttgttgaaacagttgggcagctacaaagcacagttgcaacaagtggaa
gccgccttatcaaccgaccctgaaaatgaagaccttctcaaattacagaaagacttatcg
gaagtcatagacttaacaaaagacctcctgacgtcgcagccctccgaaggtactgctact
gccaaccgctcagatgcagcccccctgaaacataggtggagtgttggggacaggtgtatg
actgtgtggagtcaggatggacaggtgtatgaagctgagattgaggagatagacggcgag
aatggcacggcggccatcaccttctccggctacgggaacgcagaggtggtgccactgcag
aacctcaagcctgccgaggagggcaagcactctgaggatgacgggaaatccaagtccagg
aaggagcagatggcagaccagagggagtacaagaagaagaaggcccagaagaaggtgctg
aggatgaaggaactggaacaggagcgagaagaccagaaatccaagtggcagagttttaac
aacaaggcctataacaagaacaagaaaggacaggtgaagaggagtatatttgcatcgccg
gagagtgtaaacggcaaggtgggagtaggaacatgtggcatagcagacaaacctatgacc
acgtatcacgacacatccaaatataacgtcaggcatctaatgccacagtga

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