KEGG   Oncorhynchus kisutch (coho salmon): 109901148
Entry
109901148         CDS       T09179                                 
Name
(RefSeq) GTP-binding nuclear protein Ran
  KO
K07936  GTP-binding nuclear protein Ran
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki03008  Ribosome biogenesis in eukaryotes
oki03013  Nucleocytoplasmic transport
oki03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:oki00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109901148
   03008 Ribosome biogenesis in eukaryotes
    109901148
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    109901148
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oki03019]
    109901148
   03009 Ribosome biogenesis [BR:oki03009]
    109901148
   03016 Transfer RNA biogenesis [BR:oki03016]
    109901148
   03036 Chromosome and associated proteins [BR:oki03036]
    109901148
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oki04147]
    109901148
   04031 GTP-binding proteins [BR:oki04031]
    109901148
Messenger RNA biogenesis [BR:oki03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     109901148
Ribosome biogenesis [BR:oki03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    109901148
  Pre-60S particles
    109901148
Transfer RNA biogenesis [BR:oki03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    109901148
Chromosome and associated proteins [BR:oki03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     109901148
   Spindle formation proteins
    109901148
Exosome [BR:oki04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109901148
GTP-binding proteins [BR:oki04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    109901148
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU RNA_helicase Gtr1_RagA G-alpha ArgoMid AAA_24 AAA_33 Septin Pox_A32 AAA_22 AAA_7 TsaE
Other DBs
NCBI-GeneID: 109901148
NCBI-ProteinID: XP_020352781
Ensembl: ENSOKIG00005014241
LinkDB
Position
LG12:51387816..51397411
AA seq 213 aa
MAEPDVQFKLVLCGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTTRGTIKYNV
WDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNK
VDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGDPNLEFVEMPALA
PPEVVMDASLAAQYENDLKVAAATGLPDEDDDL
NT seq 642 nt   +upstreamnt  +downstreamnt
atggcagaaccagatgtacaatttaagctagtgttgtgcggagatggaggcacaggaaaa
accaccttcgtgaagaggcatttaacgggagagtttgaaaagaaatacgttgcgactctg
ggagtagaggtgcaccccttggtcttccacaccactcgagggaccatcaagtacaatgtc
tgggacacagccggccaggagaagtttggggggctcagagatggctactacatacaggcc
cagtgtgcgatcatcatgttcgacgtcacatctcgcgtcacctacaagaacgtgcccaac
tggcaccgcgacctggtgcgcgtctgcgagaacatacccatagtcctgtgcggaaacaag
gtggacatcaaggacaggaaggtcaaagccaagagcatcgtgttccaccgcaagaagaac
cttcagtactatgacatctcagccaagagtaactacaactttgagaagcccttcctgtgg
ctggccaggaagctggtaggggaccccaacctagaatttgtggagatgccagccctcgcc
cccccagaagtcgtcatggacgcctccctggctgcgcagtacgagaacgaccttaaggtt
gccgcagcaacagggcttccagatgaagacgacgacctttaa

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