Oncorhynchus kisutch (coho salmon): 109902304
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Entry
109902304 CDS
T09179
Name
(RefSeq) FYVE and coiled-coil domain-containing protein 1 isoform X1
KO
K21954
FYVE and coiled-coil domain-containing protein 1
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109902304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109902304
Membrane trafficking [BR:
oki04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
109902304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
RUN
GOLD_2
Motif
Other DBs
NCBI-GeneID:
109902304
NCBI-ProteinID:
XP_020354159
Ensembl:
ENSOKIG00005009620
LinkDB
All DBs
Position
LG13:43884669..43947837
Genome browser
AA seq
1517 aa
AA seq
DB search
MAAGEALGESQLRRIIRDLHDAVAELTKEYRENGEPITDDSPNLHKFSYKLEYLLQFDQK
EKTTFLGTRKDYWDYFSDCLAKIKGANDGIRFVKSIPELKTSLGKGRAFIRYSLVHQRLA
DTLQQCLMNQRVTSDWYYTRSPLLKSHLGVDIISHLYELNEVQFDVASRGHDLDSSWPIF
ARRTLGMPNSPGHMWKPPSRSSSINSLASTYSQQAHEFLGSPDNGPSMLSELNELLPSSV
EVSMLDELRLELDQSELKQRELLDRVQQMGEEGAELRRVVVELQRQLDVSLTAQEKQQGM
QGTLKDLEAREEALSCELESLRAGERAREIENHHLQEKLAAAEGKNVELMTKLDGVLDEK
GQQATSYFDSAQKIHELLDRLKEAERGKIEALAEGEDRRRQADRLADELRVKEVAQKKDE
AKLESLSKSIAEGNAKFAECAEEQRNAIDKLKGALTLREKEVNNLQRQLQDLQSVLEEME
RQAEEARNRAEEEKEEIQESICSLKEALEVEQLYLKEQLKSREAELLSSIQRLQHLEVQS
HSLTTERDILSANLSKLESSIREQANKIEEYKTQCTNLMELNGKLLDTVKRNEELKKELA
ESRAALEGEVAALRASDKHLRGQLDDTKVTVDEKDRKLREENRALDESLQRAAMAAAVSD
ASTKRLEQENQGLREEQATVRAALGSMQEELKSIHGQIGELEKSLGASRRSEASLQEQLK
DRKAQLENKEKGCTELQARVEALEARGRTLEKAKADAENACAKKTKLIERVTTEKQTVER
TQLQRSSAQAKESQEVAAKLTMVEGQLEVNMKEVSRFQAEVMDLRVQLKTSGEDRMRSQA
QLEVMEAQKDTLSTLTEQLKAQTEALNQRHVAELLQCKEREEALSRECDQEAATRSESAA
AEASARGELATLKAQNERLAMENAEIREGLHRANTEMAELGMTICRLTAEREEAKEGWAG
EADRIGELEERTSGEVQRLEACMAAMRQENTGLREELRMTEHLPGVMLELQDKLEKAEGQ
VRSLQDTSLEEMEAVKFQMSSESMNHQNQIKSLKDELGKLRVQLPKEQEKVSSLEAKIFE
IEGVNEEYSRLIGEKDAHVAKSEAAIRQSEGEIQRLRDSVTSAEEALLAVQAAHEELKKK
LEQAEVDKHSHCLRTTAEIDDLYRTKSTLEERLIELIKDKDILWQKSDALEFEQKLRAEE
RWLQDKEATHCLGCQGHFTWWLRRHHCRLCGRIFCYYCSNNFVMTKHSGKKERCCRECYT
QHRAVVERFTEGELSPSNTQLPPPVIGPHSLPKPAPYKPTPRVTVSDPSAKTDDGAYDII
TEEDANGIYDSDSLSLTTGDSLEGEQDTRPLGALEIGTGDTTPDDPEENVPTLQDAEIAL
LKSGEVTLVVPVSIDDISQFGDGSRELFVKSSCYSVISIVVVDCSPTVSWMFSSEPKSIS
FGMVYRVTADVPVEQSKVLIPLTRCNSHKEAIQGQLKVRNPGLYTLIFDNSFSRFISKKV
LYHLTLEKPVIYDGRDF
NT seq
4554 nt
NT seq
+upstream
nt +downstream
nt
atggccgccggtgaggctttgggggagagccagcttcggaggattatcagagatctgcat
gatgctgttgccgagctcactaaagagtacagggagaatggggagccaatcacggatgat
agtcccaatctgcacaaattctcctacaaactggagtacctgctgcagtttgaccagaag
gagaagacaacatttcttggcaccagaaaagactactgggattatttcagcgactgtctg
gccaagatcaaaggcgccaacgatggtatccgctttgtcaaatccatcccagagctgaag
acatctctggggaagggcagggctttcattcgctactccctggtgcaccaacgactggcc
gacactctgcagcagtgtctgatgaaccaaagggtaaccagtgactggtactatactcgc
agccccttgctgaaatctcacctcggtgttgacatcataagtcacctgtatgagctcaac
gaggtccagtttgacgtggcctccaggggtcatgaccttgactcgtcttggcccatcttc
gcaaggaggacactgggcatgcccaactcacctggccacatgtggaaaccacccagtcgc
agctctagcatcaacagtctggccagcacctactcacagcaggctcatgagttccttggc
agccctgacaatggcccaagcatgctgagcgagttgaacgagttgttgccttccagtgta
gaggtgagtatgttggacgagctccgcctggagctggaccagtcggagctgaagcagcgg
gagctcctggacagggtacagcagatgggggaggagggtgctgagctcagacgtgtggtg
gtggagctacagaggcagctggacgtgtcgctgactgcccaggagaaacagcagggaatg
caagggaccctgaaagacctggaggcacgggaggaggccttgtcctgcgagctggaatcc
ctgagggctggggagagggccagggagatcgaaaatcaccaccttcaggagaagctggca
gccgcagaggggaagaatgtagaactaatgaccaaactggatggggtgttggatgagaag
ggccagcaggcgactagctactttgactctgcacagaagatccatgagctactggacaga
ctgaaggaggctgagagggggaagatagaggctctggcagagggagaggataggaggaga
caggccgacaggctggcagatgagctaagggtcaaagaggtggcacaaaagaaggatgag
gccaagctcgagtcgctgtcaaaatccattgcagaggggaacgctaagtttgcggagtgt
gcagaggagcagcgtaatgccattgacaagctgaagggggcattgactttgagagagaag
gaggtcaacaacctgcagaggcagctgcaggacctccagagtgttctggaagagatggag
agacaagcagaggaggccagaaacagagcagaggaggagaaagaggagatccaggaaagc
atatgcagtctgaaagaggccttggaggtggaacaactctacctgaaggagcagttgaag
agcagagaggcggagctgctctccagtatacagaggcttcagcacctggaggtccagagc
catagcctgacaacggagagggacatcctgagcgccaacctctccaagctggaatctagc
atcagggagcaggccaataaaattgaagagtacaagactcagtgcaccaacctgatggag
ctgaatgggaagttgcttgacacagtgaagaggaatgaggagctgaagaaggagctggca
gagagccgggcagccctggagggcgaggtggctgctctcagggcgtctgacaagcacctg
aggggccagctggacgacaccaaggtaacagtggatgagaaggacaggaagttgcgtgag
gagaaccgggccttggacgagagtttacagagggcagccatggccgctgcagtctcagat
gcctctaccaaacggctggagcaggagaaccaaggcctgagggaggagcaggctacggtg
agggcggcgctgggctccatgcaggaggaactgaagtccatccacgggcagattggagag
ctggagaagagcttgggggcatcccgcaggagcgaggccagcctgcaggagcagctcaaa
gaccggaaggcccagctagagaacaaggagaagggctgtacagagctccaggccagggtg
gaggccctggaggccagaggaaggacactggaaaaggctaaggcagatgcagaaaatgcc
tgtgctaaaaagacaaagctgatagagagggtcaccactgagaaacagacggtggagaga
acacagctacagagaagctctgcccaggccaaggagagccaggaggtagccgccaagctg
actatggtggagggccaactggaagtgaacatgaaggaggtgtccaggttccaggcagaa
gtgatggatttgagagtgcagctgaagacctctggggaggacaggatgaggagccaggcc
cagctggaggtgatggaggcccagaaagacacactcagtaccctaacagagcagctcaaa
gcccagaccgaggcacttaaccagaggcacgtggccgagctcctgcagtgcaaagagagg
gaagaggctctgagcagggagtgtgaccaggaggcagccacccggtccgagtcggctgcc
gcagaggcctccgccaggggagagctggccacgctaaaggcccaaaatgagaggctggcc
atggagaatgctgagatacgtgaaggcctccaccgggccaatacagagatggcagagctt
gggatgactatctgtagactgacagcagaaagggaggaggccaaggaaggctgggcgggg
gaggcagacaggataggggaactggaggagagaacttccggggaggtgcagcggctggag
gcctgcatggctgccatgcgccaggagaacaccggcctaagagaggaactgaggatgaca
gagcaccttccgggagtcatgctggagctgcaggacaagctggagaaggcagagggtcag
gtgaggagcctccaggacaccagtctggaggagatggaggcggtcaagttccagatgagc
tccgagagcatgaatcatcagaaccagatcaagagtctgaaagatgagctggggaaactg
agggtccagctgcctaaagagcaggagaaggtgtccagtctggaggccaaaatctttgag
atagagggggtgaatgaggagtactcacggctgattggagagaaggatgctcacgtcgca
aagtcagaagccgctattcgtcagagtgagggagagattcagcgactgagagactctgtc
accagtgccgaggaggctctcttggcggtccaggcggcacatgaggagctgaagaagaaa
ttggagcaggccgaggttgacaagcatagtcattgcctcaggacgacagcagagatcgac
gacctctaccgaaccaagagcaccctggaggagcgcctcatcgaactaatcaaggataag
gacattctgtggcagaagtccgatgctctggagtttgagcagaagctgcgtgcagaggaa
cgctggttgcaggacaaggaggccacccactgcctgggctgtcagggccatttcacctgg
tggctacgccgacaccactgcaggctatgtggacgcatcttctgctactactgcagtaac
aactttgtgatgaccaagcacagtgggaaaaaggagcgttgctgtagggagtgttacacc
caacatagagccgtggtggagaggttcacagagggtgagctgagtccctccaacactcag
ctgcctccccccgtaattgggcctcactcactccccaaaccagccccctacaaacctact
cccagggttacagtgtcggaccctagcgccaagactgatgacggggcctatgacataatc
acagaggaggatgcgaatggtatctatgacagcgactcgctgtccctaaccacaggggat
tcactggagggggagcaggacacacggccactgggggcgctagaaataggcacaggagac
acgactccagatgacccagaagagaatgtgcccactctgcaggacgcagagatcgccctt
ctcaagtctggagaagtcactctggtcgtccctgtcagcatcgacgacatctctcagttt
ggcgatggctcccgggagctttttgtcaagtccagttgctacagtgtgatctccatcgtc
gtggtcgattgcagccccaccgtgagctggatgttctcctcggagcccaagagcatctcg
ttcggcatggtgtaccgcgtgaccgccgacgtccccgtggaacaatccaaggtgctgatt
cctctgactcgctgtaactcccacaaagaggccatccaaggccagctgaaagtcaggaac
cctggtctctacacactcatcttcgacaactccttctcaaggttcatctccaagaaagtc
ctctaccacttgacactcgagaagccggttatttacgacggaagggatttttaa
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integrated database retrieval system
