Oncorhynchus kisutch (coho salmon): 109904020 Help Entry 109904020         CDS       T09179                                  Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism oki  Oncorhynchus kisutch (coho salmon) Pathway oki04115   p53 signaling pathway oki04145   Phagosome oki04148   Efferocytosis oki04350   TGF-beta signaling pathway oki04510   Focal adhesion oki04512   ECM-receptor interaction oki04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:oki00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     109904020   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     109904020  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     109904020    04148 Efferocytosis     109904020   09143 Cell growth and death    04115 p53 signaling pathway     109904020   09144 Cellular community - eukaryotes    04510 Focal adhesion     109904020   09142 Cell motility    04820 Cytoskeleton in muscle cells     109904020  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:oki04131]     109904020   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:oki00536]     109904020 Membrane trafficking [BR:oki04131]  Endocytosis   Phagocytosis    Opsonins     109904020 Glycosaminoglycan binding proteins [BR:oki00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    109904020 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 TSP1_ADAMTS cEGF TSP1_CCN EGF Laminin_G_3 Laminin_G_2 Motif Other DBs NCBI-GeneID:  109904020 NCBI-ProteinID:  XP_020356670 Ensembl:  ENSOKIG00005009505 LinkDB All DBs Position LG14:complement(29131157..29144214) Genome browser AA seq 1172 aa AA seqDB search MKLTGVFLLLVLWNCEGSRVAESRDDNSVYDLFELVKVNKRHQGVTLVKGADPYSPAYKI LNADLIPPVPEISFRDLIDSIQAERGFLLLVNFKQFKKTRGSLLTVERDDGSGPLFEIIS NGKAQTLDVVYSTGNKQQVVSIEDADLATGHWKNITLFIQEDRAQLFVGCEEINISEMDV PIQKVLTHEVADIARLRIGKGAVKDRFMGVLQNVRFVFGTTLEAILRNKGCQSSATLTDV MTLDNPVNGSSPAIRTDYTGHKTKDIQQVCGFSCEDITSMFKELKGLGVIVKQLSNELNR VNKESTLLMNQMNIHSGVCLHNGIVHKDKDEWTVDDCTECTCQNSATVCRKISCPLMPCA NATVPDGECCPRCGNPSDYAEDGWSPWSEWTHCSVSCGRGIQQRGRSCDRINSNCEGTSV QTRDCYPQECDKRFKQDGGWSHWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGRDCQGQG RETEVCQESPCPINGGWGPWSLWDTCSVTCGGGLQTRQRLCNNPAPKYNGKECQGDTKTS QLCGKEDCPINGCLSNPCFAGAKCTSFDDGSWKCGSCPVGYTGNGINCKDIDECKEVPDA CFTLNAVHRCENTEPGYNCLACPPRYSGPQPFGRGVEQATAKKQVCTPRNPCQDGTHDCN KNANCIYLGQFSDTMFRCECKPGYAGNGHICGDDTDLDGWPNKDLLCVENATYHCKKDNC PNLPNSGQEDHDKDGLGDACDHDDDNDGIPDDRDNCPMVYNPAQYDVDTDDVGDRCDNCV HESNPDQVDTDNNGEGDACAIDIDGDGILNERDNCPYVYNVDQRDTDGDGVGDHCDNCPL EHNPDQIDSDSDRVGDKCDNNQDIDEDGHQNNMDNCPYIPNANQADHDKDGKGDACDHDD DNDGIPDDKDNCRLAFNPDQLDSDGDGRGDVCKDDFDQDNILDIYDVCPENFGISETDFR RFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFNAVDFSGTFFINTDR DDDYAGFVFGYQSSSRFYVVMWKQITQTYWSHTPTRAQGYSGVSIKVVNSTTGPGEHLRN ALWHTGDTAGQVRTLWHDPKNIGWKDYTAYRWHLVHRPKSGLIRVVMYEGKRIMADSGNI YDKTYAGGRLGMYVFSQEMTYFSDLKYECRDS NT seq 3519 nt NT seq  +upstreamnt  +downstreamnt atgaagctgacaggagtctttctccttttggtgctttggaattgtgagggcagcagggtg gcagagagtagagatgataacagtgtatacgacctatttgagcttgtgaaagtgaacaaa aggcaccaaggtgttaccttggtaaaaggcgcagatccttacagcccagcctataagatc ctgaacgcagacctgatccccccggttcccgagatctccttcagggacctcattgattcg atacaagctgagaggggattccttctcctggtcaacttcaagcagttcaaaaaaaccagg ggcagtcttttgactgtggagagggatgacggatcaggaccgttattcgaaatcatttct aatggcaaggcgcaaactctggatgtggtatactccaccgggaacaagcaacaggtagtg tccatagaagatgcggatctagcgactggacactggaagaatatcacgctgttcattcag gaggatcgtgcccagctgttcgtcgggtgtgaagagatcaatatatcagaaatggacgta cccatccaaaaggtcctgacgcatgaggttgccgacattgcccgtttgaggatcggaaaa ggagctgtgaaagatagatttatgggagtgcttcagaacgtgcgcttcgtttttggaacc actttggaggcgattttacgcaataagggatgccaaagctctgcaactttgactgatgtc atgacactggacaacccagtaaatgggtccagcccagcaataaggactgattacactggc cacaaaaccaaagatattcagcaggtctgtggtttttcctgtgaggatatcaccagcatg ttcaaggagctcaaggggcttggtgtgattgtgaagcagctgtcaaacgagctcaacaga gtgaataaggagagcactctgctcatgaaccagatgaacatccacagtggggtctgtctt cacaacggcattgtgcacaaggacaaagatgagtggactgtggacgactgcacagagtgt acctgccagaactctgccactgtgtgtcgcaaaatctcttgccccctgatgccctgtgcc aatgccaccgtgcctgatggagagtgctgcccacgttgtggaaacccgagtgactatgct gaggatggctggtccccctggtctgaatggacccattgttctgtgtcttgtggacggggt atccagcagcgaggtcgctcctgcgaccgcatcaacagcaactgcgaaggcacttctgtg cagacccgcgactgctaccctcaggaatgtgacaagcgctttaagcaggatggtggctgg agccactggtctccctggtcttcctgctctgtgacctgtggtgagggagtcatcacccgc atccgcctctgcaactcccccactccccagatgggaggcagagactgtcaaggacagggc cgagagacagaggtctgccaggaatcaccttgtccaattaacggaggctggggaccctgg tctctgtgggacacctgttctgtcacctgtggaggtggactccagactcgccagcgtctc tgtaacaaccctgcccccaagtataatgggaaggaatgtcagggtgacaccaaaacatcc caattgtgtggcaaagaggactgccctattaatggctgtctgtccaacccgtgctttgct ggagctaagtgtaccagctttgatgatggttcctggaagtgtggctcatgcccagtgggc tacaccggaaacggcatcaactgcaaggacatcgacgagtgcaaggaggttcctgatgca tgcttcacactcaacgcagtccaccgctgtgagaacactgagcctggctacaactgcctt gcctgcccccctcgctactcaggaccacagcccttcgggaggggagtggagcaagccaca gccaagaaacaggtgtgcacaccccgtaacccctgccaagacggcacccatgattgcaac aagaatgctaactgtatctacctgggtcagttcagcgacaccatgttccgctgtgagtgc aaacctggttacgctggcaatggccacatctgtggagatgacaccgacctggatggatgg cccaacaaagacctcctgtgtgtggagaacgccacctaccactgcaagaaagacaactgt ccaaaccttcccaactctgggcaggaggaccatgacaaagatgggcttggtgacgcttgc gatcacgatgatgacaatgatgggatccctgatgatagggacaactgcccaatggtctac aaccccgctcagtatgatgtggacacagatgacgttggtgatcgctgtgataactgtgtg catgagagcaaccctgaccaagtcgacacagacaacaacggagagggagatgcctgtgct attgacattgacggtgatggtattctaaatgagagggacaactgcccctatgtctacaat gtggaccagagagacactgacggggacggagtgggagaccactgcgacaactgccctctt gagcacaacccagaccagattgactctgactcagatcgtgtgggagacaagtgcgacaac aaccaggacattgatgaggacggtcatcagaacaacatggacaactgtccctatatcccc aacgccaaccaggccgaccacgacaaagatggcaagggtgacgcctgcgaccacgatgac gacaacgacggtatccctgacgacaaggacaactgcaggctggcctttaaccctgaccag ctggactctgatggtgatggtcgtggagatgtttgcaaagatgactttgaccaagataac atacttgatatctacgatgtgtgccctgagaactttggcatcagcgagacggacttccgc aggttccagatggtaccactggaccccaagggcacctcccagatagaccccaactgggtg gtccgacaccagggcaaagagctggtgcagactgtcaactgtgaccctggcatcgctgtt gggttcgatgagtttaacgcagtggacttcagtggaacgttcttcatcaacacagacagg gatgatgactacgctggctttgtgtttggctaccagtccagctccaggttctatgtggtg atgtggaagcagatcacacagacctactggtcccacaccccgaccagagctcagggctac tctggagtgtccatcaaagtagtcaactccaccacaggacctggggagcatctgaggaat gccctttggcacaccggtgacactgctggacaggtacgtactctgtggcacgaccccaag aacattggctggaaagactacactgcctacagatggcacctggtccacaggcccaagtct ggactcatcagagttgtgatgtatgaaggcaagagaatcatggcggattctggaaatatc tacgacaagacttatgctggtggaagactaggcatgtatgtcttctctcaggagatgaca tacttctcagacctcaaatacgaatgcagagattcttaa

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