Oncorhynchus kisutch (coho salmon): 109904020 Help Entry 109904020         CDS       T09179                                  Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism oki  Oncorhynchus kisutch (coho salmon) Pathway oki04115   p53 signaling pathway oki04145   Phagocytosis oki04148   Efferocytosis oki04350   TGF-beta signaling pathway oki04510   Focal adhesion oki04512   ECM-receptor interaction oki04518   Integrin signaling oki04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:oki00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     109904020   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     109904020    04518 Integrin signaling     109904020  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     109904020    04148 Efferocytosis     109904020   09143 Cell growth and death    04115 p53 signaling pathway     109904020   09144 Cellular community - eukaryotes    04510 Focal adhesion     109904020   09142 Cell motility    04820 Cytoskeleton in muscle cells     109904020  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:oki04131]     109904020   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:oki00536]     109904020 Membrane trafficking [BR:oki04131]  Endocytosis   Phagocytosis    Opsonins     109904020 Glycosaminoglycan binding proteins [BR:oki00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    109904020 SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C VWC2L_2nd EGF_3 TSP1_ADAMTS cEGF TSP1_CCN Laminin_G_3 EGF Laminin_G_2 Motif Other DBs NCBI-GeneID:  109904020 NCBI-ProteinID:  XP_020356670 Ensembl:  ENSOKIG00005009505 LinkDB All DBs Position LG14:complement(29131157..29144214) Genome browser AA seq 1172 aa AA seqDB search MKLTGVFLLLVLWNCEGSRVAESRDDNSVYDLFELVKVNKRHQGVTLVKGADPYSPAYKI LNADLIPPVPEISFRDLIDSIQAERGFLLLVNFKQFKKTRGSLLTVERDDGSGPLFEIIS NGKAQTLDVVYSTGNKQQVVSIEDADLATGHWKNITLFIQEDRAQLFVGCEEINISEMDV PIQKVLTHEVADIARLRIGKGAVKDRFMGVLQNVRFVFGTTLEAILRNKGCQSSATLTDV MTLDNPVNGSSPAIRTDYTGHKTKDIQQVCGFSCEDITSMFKELKGLGVIVKQLSNELNR VNKESTLLMNQMNIHSGVCLHNGIVHKDKDEWTVDDCTECTCQNSATVCRKISCPLMPCA NATVPDGECCPRCGNPSDYAEDGWSPWSEWTHCSVSCGRGIQQRGRSCDRINSNCEGTSV QTRDCYPQECDKRFKQDGGWSHWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGRDCQGQG RETEVCQESPCPINGGWGPWSLWDTCSVTCGGGLQTRQRLCNNPAPKYNGKECQGDTKTS QLCGKEDCPINGCLSNPCFAGAKCTSFDDGSWKCGSCPVGYTGNGINCKDIDECKEVPDA CFTLNAVHRCENTEPGYNCLACPPRYSGPQPFGRGVEQATAKKQVCTPRNPCQDGTHDCN KNANCIYLGQFSDTMFRCECKPGYAGNGHICGDDTDLDGWPNKDLLCVENATYHCKKDNC PNLPNSGQEDHDKDGLGDACDHDDDNDGIPDDRDNCPMVYNPAQYDVDTDDVGDRCDNCV HESNPDQVDTDNNGEGDACAIDIDGDGILNERDNCPYVYNVDQRDTDGDGVGDHCDNCPL EHNPDQIDSDSDRVGDKCDNNQDIDEDGHQNNMDNCPYIPNANQADHDKDGKGDACDHDD DNDGIPDDKDNCRLAFNPDQLDSDGDGRGDVCKDDFDQDNILDIYDVCPENFGISETDFR RFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFNAVDFSGTFFINTDR DDDYAGFVFGYQSSSRFYVVMWKQITQTYWSHTPTRAQGYSGVSIKVVNSTTGPGEHLRN ALWHTGDTAGQVRTLWHDPKNIGWKDYTAYRWHLVHRPKSGLIRVVMYEGKRIMADSGNI YDKTYAGGRLGMYVFSQEMTYFSDLKYECRDS NT seq 3519 nt NT seq  +upstreamnt  +downstreamnt atgaagctgacaggagtctttctccttttggtgctttggaattgtgagggcagcagggtg gcagagagtagagatgataacagtgtatacgacctatttgagcttgtgaaagtgaacaaa aggcaccaaggtgttaccttggtaaaaggcgcagatccttacagcccagcctataagatc ctgaacgcagacctgatccccccggttcccgagatctccttcagggacctcattgattcg atacaagctgagaggggattccttctcctggtcaacttcaagcagttcaaaaaaaccagg ggcagtcttttgactgtggagagggatgacggatcaggaccgttattcgaaatcatttct aatggcaaggcgcaaactctggatgtggtatactccaccgggaacaagcaacaggtagtg tccatagaagatgcggatctagcgactggacactggaagaatatcacgctgttcattcag gaggatcgtgcccagctgttcgtcgggtgtgaagagatcaatatatcagaaatggacgta cccatccaaaaggtcctgacgcatgaggttgccgacattgcccgtttgaggatcggaaaa ggagctgtgaaagatagatttatgggagtgcttcagaacgtgcgcttcgtttttggaacc actttggaggcgattttacgcaataagggatgccaaagctctgcaactttgactgatgtc atgacactggacaacccagtaaatgggtccagcccagcaataaggactgattacactggc cacaaaaccaaagatattcagcaggtctgtggtttttcctgtgaggatatcaccagcatg ttcaaggagctcaaggggcttggtgtgattgtgaagcagctgtcaaacgagctcaacaga gtgaataaggagagcactctgctcatgaaccagatgaacatccacagtggggtctgtctt cacaacggcattgtgcacaaggacaaagatgagtggactgtggacgactgcacagagtgt acctgccagaactctgccactgtgtgtcgcaaaatctcttgccccctgatgccctgtgcc aatgccaccgtgcctgatggagagtgctgcccacgttgtggaaacccgagtgactatgct gaggatggctggtccccctggtctgaatggacccattgttctgtgtcttgtggacggggt atccagcagcgaggtcgctcctgcgaccgcatcaacagcaactgcgaaggcacttctgtg cagacccgcgactgctaccctcaggaatgtgacaagcgctttaagcaggatggtggctgg agccactggtctccctggtcttcctgctctgtgacctgtggtgagggagtcatcacccgc atccgcctctgcaactcccccactccccagatgggaggcagagactgtcaaggacagggc cgagagacagaggtctgccaggaatcaccttgtccaattaacggaggctggggaccctgg tctctgtgggacacctgttctgtcacctgtggaggtggactccagactcgccagcgtctc tgtaacaaccctgcccccaagtataatgggaaggaatgtcagggtgacaccaaaacatcc caattgtgtggcaaagaggactgccctattaatggctgtctgtccaacccgtgctttgct ggagctaagtgtaccagctttgatgatggttcctggaagtgtggctcatgcccagtgggc tacaccggaaacggcatcaactgcaaggacatcgacgagtgcaaggaggttcctgatgca tgcttcacactcaacgcagtccaccgctgtgagaacactgagcctggctacaactgcctt gcctgcccccctcgctactcaggaccacagcccttcgggaggggagtggagcaagccaca gccaagaaacaggtgtgcacaccccgtaacccctgccaagacggcacccatgattgcaac aagaatgctaactgtatctacctgggtcagttcagcgacaccatgttccgctgtgagtgc aaacctggttacgctggcaatggccacatctgtggagatgacaccgacctggatggatgg cccaacaaagacctcctgtgtgtggagaacgccacctaccactgcaagaaagacaactgt ccaaaccttcccaactctgggcaggaggaccatgacaaagatgggcttggtgacgcttgc gatcacgatgatgacaatgatgggatccctgatgatagggacaactgcccaatggtctac aaccccgctcagtatgatgtggacacagatgacgttggtgatcgctgtgataactgtgtg catgagagcaaccctgaccaagtcgacacagacaacaacggagagggagatgcctgtgct attgacattgacggtgatggtattctaaatgagagggacaactgcccctatgtctacaat gtggaccagagagacactgacggggacggagtgggagaccactgcgacaactgccctctt gagcacaacccagaccagattgactctgactcagatcgtgtgggagacaagtgcgacaac aaccaggacattgatgaggacggtcatcagaacaacatggacaactgtccctatatcccc aacgccaaccaggccgaccacgacaaagatggcaagggtgacgcctgcgaccacgatgac gacaacgacggtatccctgacgacaaggacaactgcaggctggcctttaaccctgaccag ctggactctgatggtgatggtcgtggagatgtttgcaaagatgactttgaccaagataac atacttgatatctacgatgtgtgccctgagaactttggcatcagcgagacggacttccgc aggttccagatggtaccactggaccccaagggcacctcccagatagaccccaactgggtg gtccgacaccagggcaaagagctggtgcagactgtcaactgtgaccctggcatcgctgtt gggttcgatgagtttaacgcagtggacttcagtggaacgttcttcatcaacacagacagg gatgatgactacgctggctttgtgtttggctaccagtccagctccaggttctatgtggtg atgtggaagcagatcacacagacctactggtcccacaccccgaccagagctcagggctac tctggagtgtccatcaaagtagtcaactccaccacaggacctggggagcatctgaggaat gccctttggcacaccggtgacactgctggacaggtacgtactctgtggcacgaccccaag aacattggctggaaagactacactgcctacagatggcacctggtccacaggcccaagtct ggactcatcagagttgtgatgtatgaaggcaagagaatcatggcggattctggaaatatc tacgacaagacttatgctggtggaagactaggcatgtatgtcttctctcaggagatgaca tacttctcagacctcaaatacgaatgcagagattcttaa

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