Oncorhynchus kisutch (coho salmon): 109904301
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Entry
109904301 CDS
T09179
Name
(RefSeq) otoferlin-like isoform X2
KO
K19949
otoferlin
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
109904301
Membrane trafficking [BR:
oki04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
109904301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
109904301
NCBI-ProteinID:
XP_020357144
Ensembl:
ENSOKIG00005044164
LinkDB
All DBs
Position
LG14:11676102..11721930
Genome browser
AA seq
1798 aa
AA seq
DB search
MKKSRGHKSDHGKGGGGDEAAILETEDLDFTGGMGGGGGLDPDTISLASVTAVTTNVSNK
RSKPDIKMEPSAGRPVDYQVSVTIVEARQLVGLNMDPVVCVEIGDDKKYTQMKESTNCPY
YNEYFVFDFHVPSDVMFDKILKLSVIHSKNLLRSGTLVGSFKLDIGTVYSQPEHQFFHKW
ALLSDPDDITAGCKGYIKCDIAVVGKGDNIKTPHKATETDEDDIEGNLLLPEGVPAERQW
ARYYVKIYRAEGLPKMNTSIMANVKKAFIGENKDLVDPYVQILFAGQRGKTSIQKSSYEP
IWNEQIVFTEMFPPLCKRMKVQIRDSDKVNDVALGTHFIDLRKIANDGDKGFLPTLGPAW
VNMYGSTRSYTIMDEHQDLNEGLGEGVSFRARLLVSLCVEILDTSSPEVMSSTEVKVEGV
PKISESATGKVEEFFLFGAFLEATMIDRKIGDKPICFEVTIGNYGSEIDGVTKLKSSSGK
KSGGDGDEEETELIHGSSDEEEGDDDNDLVSVSTTPPMKPVITDRNYFHLPYFERKPCIY
IKSWWQDQRRRLYNANLIDNIADKLEEGLNDVQEVIKTEKAYPERRLRGVLEDLSNGCSQ
FLTLANKDQNQTGRTKLDKERLKSCMRELENLGQQAKTIRTQVKKNTVRDKIKLVQNFLH
KLRFLADEPQHSIPDIYIWMMSNNKRIAYARVPSKDILYSGVDEETGKDCGKVKTIFLKL
PGKKGFGAAGWTVQAKTEIYLWLGLNRQRKDFLSGLPNGFEENKMQKGPGSQSAPPISLT
YMMKQIFQLRVHMYQARSLFAADSSGLSDPFARVFFSTHSQVTEVLNETLCPTWDQLMVF
DNVELFGEVGELRDDPPIIVIEIYDQDTVGKAEFMGRTFAKPITKMADEHYGPPRFPPQL
EYYQIYRGNCTAGEMLAAFELLQIGPHGKADLPPIDGPTDMDRGPILPVPLGIRPVLSKY
RIEVLFWGLRDLKRVNLAAVDRPRVDIECAGKGVQSSLIQNYKKNPNFGTLVKMFEVDLP
ENELLHPPLNIRVVDCRAFGRYTLVGNHAVTTLRKFIYRAADKEANNWNTQEEIIVNYEP
EPSIKKMETMVKLDSGSDAVVKIEEDDKGGKKKKRKKGGDEVEEEEFDESMLDWWSKYFA
SIETLMEILKAQEAAMADAEEKEDQDISAEGGEIKPDDSPVKGKKGKGKDKRRPGDMPEK
KKHKLNELQVYPKELEKEFDNFEDWLHTFNLFRGKAGDDDDQNMADEDRIIGKFKGSLCM
YKVPVSDEMQREMGFDSNMGMFQNIPTNDPINVVVRVYIIRATDLHPADINGKADPYIAI
KLGKSDIKDKENYLSKQLNPIFGKSFDMEATFPMDSTLTVSVYDWDLVGTDDLIGETKLD
LENRYYSKHRAICGLPSKYAVHGYNVWRDPLKPTQILAKLCKEGKLDGPHYGPGGRVKVA
NRIFMGPTEIEDENGLKKQTDEHLALTALKHWEDIPRVGCKLIPEHVETRPLLNPDKPGI
EQGRIEMWVDMFPKDMPAPGPAIDIAPRKPKKFELRVIIWNTDEVILEDDDIFTGEKSSD
IFVRGWLKGQQEDKQDTDVHYHSLTGEGLFNWRFIYPFDYLQAEEKIVISKKESMFAWDE
TEYKIPARLNLQVWDADHFSADDFLGAIELDLNRFPRGAKTAKQCSINMVLNEQDIPMVS
IFKQRRIKGWWPFLARDENDEFELTGKVEAELQLMTAEEAEKNPVGEGRNEPEPLEKPNR
PDTAFLWFLMPFKAIKNLICNQYFWLTVKLVVALLLVLILGLFIYSMPGYMVKKLMGA
NT seq
5397 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatcacgtggccataagtcagaccacgggaaaggaggagggggcgatgaggct
gccatcttggagacagaggacctggacttcacgggagggatgggagggggagggggtctt
gaccctgacaccatctccctggcctcagtcacagccgtcaccactaacgtctctaacaag
agatcaaaaccagacattaagatggaacctagtgccgggagaccagtggattaccaagtt
agtgttaccattgtagaggccagacagctagtagggctgaacatggacccagtggtctgt
gtggagatcggagacgataagaagtacactcagatgaaggagtcaacaaactgcccatat
tacaatgagtattttgtctttgacttccacgtcccatcggatgttatgtttgacaagatc
ctgaagctttcggtcatccactccaagaacctgctgcgtagtggcaccctggttggctcc
ttcaaactggatataggcaccgtctactcacagccagaacaccagtttttccacaaatgg
gcccttctctctgaccctgatgacatcactgccgggtgcaaaggttacattaaatgtgac
atcgccgttgtggggaaaggagacaacatcaagactccccacaaggccacagaaaccgat
gaagatgacatagaaggtaacctgctgttacctgagggggtccccgcggagcgccagtgg
gctcgctactatgtgaagatctacagagccgagggccttcccaagatgaacaccagcatc
atggctaatgtcaagaaggcttttataggggagaacaaggaccttgtggacccttatgta
caaatactgttcgctggccagagggggaaaacatctatccagaagagcagctacgagccc
atctggaacgagcagatcgtcttcactgagatgtttccaccgctctgcaaacgcatgaag
gtccagatccgagactcggacaaagtgaacgacgtggccctcggaacacacttcattgac
ctgagaaagatcgccaatgatggagacaaaggcttccttcccaccctgggtccggcctgg
gtaaacatgtatggctccacccgtagctacaccatcatggacgagcaccaggacctgaac
gaggggctgggggagggggtgtccttcagggcccgtctgctggtcagcctgtgtgtggag
atcctggacacctcctctccagaggttatgagctccacagaggtcaaggtagagggggtg
cccaaaatctcagagagcgccacagggaaagtggaggagttcttcctcttcggggcgttc
ctggaggccaccatgattgacaggaagatcggggacaaaccaatctgcttcgaggttaca
ataggtaactatgggagtgagattgatggtgtgaccaaactcaagtcgagtagcgggaag
aagagtgggggagacggagatgaagaggagacagagctgatccatggatctagtgatgaa
gaggagggagatgatgacaatgacctggtctcagtgtccaccaccccgccgatgaaacca
gtcatcaccgacagaaactatttccacctgccttactttgagaggaagccgtgtatttac
atcaagagctggtggcaggaccagagaagaagactgtacaatgccaaccttatagacaac
attgccgataaactggaggagggtctgaacgatgttcaggaggtcattaagacagagaag
gcatatcctgaacgcagactgagaggggtcttggaggatctcagcaatggatgcagtcaa
tttctgactctagctaacaaggaccaaaaccagactgggaggaccaagctggacaaagag
agactcaagtcctgcatgagggaactggagaacttaggtcagcaggctaagaccatcagg
acacaggtgaagaagaacacagtgagggataagatcaagctggtgcagaactttctccac
aagctcaggttcctagctgatgagccgcagcacagcatccctgacatctacatctggatg
atgagtaataacaagcgaatcgcctacgcccgtgtcccctccaaagacatcctgtactcc
ggggtggacgaggagactgggaaggactgtggcaaagtcaaaaccatcttccttaagctg
cctggtaagaagggatttggggcagctggctggacagtgcaggcgaagacagagatctac
ctgtggctgggtctgaaccgtcagaggaaagacttcctgtctggtctgcccaatggcttc
gaggagaacaagatgcagaaaggacctggctcgcagtctgctcctcccatcagcctcaca
tacatgatgaagcagatctttcagctgagggtccatatgtaccaggctcgcagcctgttt
gcggcagacagcagcggtctctctgaccccttcgccagggtcttcttctccacacacagc
caggtcacagaggtgctgaatgagacactgtgtcccacctgggaccagctgatggtgttt
gacaacgtagaactgttcggagaggtcggcgaactcagggacgaccctcctataatcgtc
atagaaatctatgaccaggacacggtgggcaaagcagagttcatgggcaggactttcgcc
aagcccataaccaagatggctgacgaacactacggacctccacgtttccctccccaacta
gagtactaccagatctatagggggaattgcaccgctggagagatgctggcagccttcgaa
ctgctgcagattggtccgcatggtaaagctgacctgccgcccatcgacggtcccacagac
atggaccgtggtcccatcctacctgtccctctgggcatcagaccagtcctcagcaagtac
aggatcgaggtgctgttctgggggctcagggacctgaagagggtcaacctagccgcggtg
gacaggcctcgtgtggacatagaatgtgccggtaaaggggtccagtcttccctgatccag
aactacaagaaaaatcctaacttcggcaccctggttaagatgtttgaggtggatctgcct
gagaatgagctgctccaccctcccctgaacatcagagtggtggactgcagagcgttcggt
cgctacaccttagtggggaaccatgctgtcaccacactacgcaagttcatctaccgggca
gcagacaaggaagccaacaactggaacactcaagaggagatcattgtcaactacgagcca
gaaccctccatcaagaagatggagaccatggttaagctggactctgggtctgatgcggtg
gttaaaattgaggaggatgataagggagggaagaagaagaagagaaagaagggaggagac
gaggtggaggaggaagagtttgatgagagcatgttggattggtggtcaaagtacttcgcc
tcgatcgaaactctgatggagattctcaaggctcaggaggcagctatggcagatgctgag
gagaaagaggaccaagatatttctgctgagggtggagagatcaaacctgatgactctcct
gtcaaaggaaagaaaggaaaaggaaaggacaagaggaggcctggagacatgccagagaag
aagaagcacaaactcaatgagctgcaggtgtatcccaaggagttggagaaggagtttgat
aactttgaagactggcttcacaccttcaacctgttcagagggaaggccggagacgacgac
gaccagaacatggcggatgaggacaggattattggcaaattcaaaggttctctgtgcatg
tacaaagtgccagtgtcagatgagatgcagagggagatgggcttcgactccaacatgggc
atgttccagaacattccaaccaacgacccaatcaacgttgtagtccgggtctatatcatc
agagcaacggatctgcatccagcggatatcaatggaaaagctgatccgtacatcgctatc
aaactaggaaagtcagacatcaaagacaaagagaactacctctccaagcaactcaacccc
atctttggcaaatcttttgacatggaagccacatttcccatggactctacactaacagtg
tccgtctatgactgggacttagtgggcactgacgacctgattggggagactaaactggat
ctggagaaccggtactacagcaagcacagagccatatgtggcctcccatccaaatatgcc
gtccatggctacaatgtgtggcgggaccccctgaagccaacccagatcctggccaagctg
tgtaaagagggcaagctggacgggccccactatggccctggaggacgggtcaaggtggcc
aacaggatcttcatgggcccaaccgagatcgaagatgaaaatggtctgaagaagcagaca
gatgagcacctggccctgacggcgctgaagcactgggaggatatccctcgggtgggctgt
aaactcatcccagaacatgtggagaccaggccactcctcaaccctgataagcctggcatt
gaacaggggaggattgagatgtgggtggacatgttccccaaggatatgcctgcacctgga
ccggccattgatatcgcacccagaaaaccaaagaagtttgaactgagggtgatcatctgg
aacacagacgaggtcattctagaggatgatgacatcttcactggagagaagtccagtgat
atcttcgtgcggggctggttgaaaggccaacaggaggacaagcaggacacagacgtccac
taccactccctgacaggggagggtctcttcaactggcgcttcatctacccctttgactac
ttacaggccgaggagaagatcgtcatctctaagaaggagtccatgttcgcctgggacgag
actgagtataagatccctgctcgtctcaacctacaagtctgggatgctgatcacttctct
gcagatgacttcttaggcgccattgagctggatctgaaccgtttccctcgtggagcgaag
acagccaaacagtgctccatcaacatggtgctgaacgaacaagatattcccatggtgtcc
atcttcaaacagaggaggatcaagggctggtggcccttcctagccagagacgagaatgac
gagtttgaactcactgggaaagtggaagcagagctgcagctgatgactgcagaggaggct
gagaagaacccagtaggtgaaggacgcaatgaacctgaacccctggagaaacccaaccgt
ccagacacagccttcctgtggttccttatgcctttcaaggccatcaaaaacctcatctgc
aaccagtacttctggctcacggtcaagttagttgtagccctgctgctggtgctcatcctg
ggcctcttcatatacagcatgcctggatacatggtcaagaagctaatgggggcttga
DBGET
integrated database retrieval system
