Oncorhynchus kisutch (coho salmon): 109909873
Help
Entry
109909873 CDS
T09179
Name
(RefSeq) LOW QUALITY PROTEIN: vascular endothelial growth factor receptor 1-like
KO
K05092
fms-related tyrosine kinase 3 [EC:
2.7.10.1
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109909873
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
oki01001
]
109909873
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
oki04090
]
109909873
Enzymes [BR:
oki01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
109909873
Protein kinases [BR:
oki01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
109909873
CD molecules [BR:
oki04090
]
Proteins
109909873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
Pkinase
I-set
VEGFR-1-like_Ig-like
Ig_2
ig
VEGFR1-3_N_Ig-like
V-set
VEGFR-2_TMD
Ig_VEGFR-1-like_5th
Ig_4
Paf1
Motif
Other DBs
NCBI-GeneID:
109909873
NCBI-ProteinID:
XP_031651164
LinkDB
All DBs
Position
LG18:complement(69526093..69627140)
Genome browser
AA seq
1884 aa
AA seq
DB search
MICFIFVVLCGLSGSALAKGKVDKTSSLFSLPGKVDREPKGKFSVPVLDVKSRQLVLEAN
QTLTIHCRGRWELSWVFPGGVARDKESVQLEDSRCGRQSQHYCSQLIISSAQAQHTGSFR
CRYSQRTRRQSAVYIYVTDRQRPFVEEQNNSPDVVYIKESQPLVFPCRVTHPDATVSLVK
FPDRELTPDQRNIVWNSRQGFLIRSPTYFYIGLFSCKTSVNGTTHSLSYLTHRQVNKIME
VYLNSTSPVQTIQGDSLAINCTVTAEWNSRVSISWDYPGQVNRAAIISRRIMASKTHMVF
YSILSIPKLHRSDRGLYICRVTSGPVSRETNVSVTVYDRPYIRLTPRQGAIVEAHAGQKS
YRLSPKLRAFPAPEIIWLKDGKVAAEQCSRYHVDGNSLVIRDVAKEDAGKYTILVGIQEH
RLYQNLTLSLVVNVSPGIGEKAVSLQDPGSVPQGSRQALHCSSHGVPPPHIAWLWHPCPP
KGLCLCPYSSSLWSLVRERAPSTSTQNHIXTHRQEVLQGKNKVSAPPVEWTDSASGSVTL
SCLAHGVPHPLITWYKDQHSLLQDSGILLFSESGTLHIDRITVKEQGLYTSQATNERVSA
VGSTYIWVHNSSEGLSLEILTLTCTCLVATLFWLLLTLFIRKLKQAKAEYLSIILDLDKG
PPEEQCDRLQYDPSQWEFPETASNWEPLDHEAFGKVMQVSAFGIYNSTGCRTVPVKMLKE
GATHSEHKALMNVVKLLDTVSTGHLTENPVSTGHLTENPVSTGHLTENPVSTGHLTENPV
STGHLTENPVSTGHLTENPVSTGHLTENPVSTGHLTETPDTVSTGHLTENPVSTGHLTEN
PVSTGHLTETPLAPVTSQRTLKGNSRVLIAALLLLFARCDGNASQPQGDSPRAHCITSLE
GRLCTLSETHLNGSGPTRLEVPAGQRLLITMQSLPGDPVCSWSRGADPKRRGYSLTILQT
HVSDSGEYTFSCERGGINSSLTLSLLVVPLLRLPTKPQLKFIPGKRGFLPDYQCSSEGNP
KPKIKWFNNLDKTGKGNDGTDIPSTIKERANNKEKSKNYFRTTVMCCASNSQGEACSQQY
DYDLDRASDEDDEAPEITVSPGQPLLLSCRQKENSTAQWLPDNQRQVSIYQLTYKEIYMT
YLFIESVTVNHSGIYTCRGNKNKVKSTHVQVLEKGFISIDQLNESSTISAQEKPGFCLRA
LVSSHPLLRCHWLGPDSRQTQCPEPTRLWKSRTLELCNTEPGEYQLHLEAGELNLTQTLS
LCVAGTSTPSLLQNGDNITCETNTPLPFNLTWSSCSLTNDSCQSESAAWKEIPAPPPKLS
DSDQFCHKRILSTRYSTEVGDFVKCCITNSVHSQSHCSETLFNIQSKSVPPASSQLLLKV
SSLVLFLALMLVSLALLYFIRKKKPQYQSQLQMIQMVGPNDNDYIYINFKDFQYDQKWEF
PRENLELGKELGSGAFGMVLQATAYGISKPGVSLQVAVKMLKEKHETVEKEALMSELKML
THIGQHANIVNLLGACTGSGPTYLIFQYCRNGDLLNYLKNNRELYHKSLTDAFTRDRFSR
LYHNLPKRSSSEFQRPVDSIYIPMSPTTTRGQESIALISLNSSPMNTSDGPGMYEELNEL
QEEEEEEEEEEEEEEEEEEEALTYDDLLSFSYQVAKGMDFLSSKHCIHRDLAARNVLVTQ
GGLVKIGDFGLARDIDNDSNYVVRGNVRLPVKWMAPESIFQGMYTMQSDVWAYGILLWEV
FSLGVTPYPGIKVDNNFYVMIERGFKMEQPYYASESVYSIMCKCWALEPQDRPHFSKLVA
FMDDQLADMEEKLYHNILDKRCSHVLYQNAPVKSDLSALAKEKGHQAQSQNQYCKTHSTG
EAPTTLSDRVAMETDDDNPLKPCQ
NT seq
5655 nt
NT seq
+upstream
nt +downstream
nt
atgatttgctttatcttcgtggttctatgtggattgtctggcagtgcgcttgcaaaaggt
aaagtggataagacatcctctctgttctctctcccaggtaaagtggatagggagcctaag
gggaagttcagtgttcctgttctggatgtgaagagtcgacagctggtcctggaggccaac
cagacgctgacgatccactgcaggggtcggtgggagctgtcgtgggtgttccctggaggt
gtggccagagataaagagagtgtgcaattggaggattctcgctgtgggaggcagagccag
cattactgcagccaactgattattagctcagcccaggcccagcacacaggatcgttccgg
tgtcggtatagccagcggacccgcaggcagagtgctgtctacatctatgtcacagacaga
cagcggccatttgtggaggagcagaataacagtccagacgtggtgtatatcaaggagagc
cagcctctggtcttcccctgtagggtcacccaccctgacgccaccgtgtcattggtcaag
ttccctgaccgtgagttgaccccagaccagaggaacatagtgtggaacagcagacagggc
ttcctcatccgcagtcccacctacttctacatcggcctgttctcctgcaagacctctgtc
aacgggaccacacactccctcagttacctcacacacagacaagtgaataagattatggag
gtgtatctgaacagtactagtcccgtccagactatacagggggacagtctggccatcaac
tgtactgtcactgcagagtggaacagcagagtgtccatcagctgggactaccctgggcag
gtaaaccgggcagccataattagtaggcgtatcatggccagtaaaactcacatggttttc
tacagtattctgtccatccctaaactccaccgctctgacagagggctctatatctgccga
gtgaccagtggaccggtcagccgagagactaacgtgtcagtcacggtctacgaccgtccg
tatatccgtctgacacccaggcaaggggctatagtggaggctcatgcaggacagaagtcc
taccgactctcccccaaactacgggccttccctgccccagagatcatctggttgaaggat
gggaaggtagcagcagaacagtgttcccgttaccatgtggacgggaattccctggtgatc
cgggatgtggcgaaggaggatgcagggaagtacactatcctggtgggaatccaggagcac
agactctaccagaacctaacgctctctctggtggtcaacgtgagtcctgggataggggag
aaggcggtgtccttgcaggacccaggtagtgtcccgcagggcagcagacaagccctgcac
tgcagctcccacggagtcccccctcctcacatcgcctggctctggcacccctgcccccct
aaaggcctgtgtctgtgtccttactcctcctcactatggagcctggtgagagagagggcc
cccagcacgtccacacagaaccacatcnctacacacagacaggaagtgctccaggggaag
aataaggtgagcgcaccaccggtggagtggacagactctgccagtggttcagtgacactc
agctgcctcgcccacggcgtgccacaccccctcatcacatggtacaaggatcaacactct
cttctgcaggactcaggtattttactattcagtgaaagcgggaccctccacattgaccga
atcacagtgaaggaacagggtctgtacaccagccaggccaccaatgagagagtctctgct
gtgggctccacctacatctgggttcacaactcgtcagagggcctgtctctggagatcctt
actctcacctgtacctgtctggtggccactctcttctggctgctgcttactctcttcata
cgtaaactaaaacaggcaaaggcagagtacctgtcaatcatcctggacctggacaagggg
cctccggaggagcagtgtgatagactacagtacgaccccagccaatgggagttcccagag
actgcctcgaactgggaacccctggaccatgaggcctttgggaaggtcatgcaggtgtct
gcctttggcatctacaactctacaggctgcagaactgtgcctgtcaagatgctcaaagag
ggggctactcacagtgagcacaaggctctgatgaatgtggtcaagctgctagacaccgtt
agcaccggtcacctcacagagaaccccgttagcaccggtcacctcacagagaaccccgtt
agcaccggtcacctcacagagaaccccgttagcaccggtcacctcacagagaaccccgtt
agcaccggtcacctcacagagaaccccgttagcaccggtcacctcacagagaaccccgtt
agcaccggtcacctcacagagaaccccgttagcaccggtcacctcacagagacaccagac
accgttagcaccggtcacctcacagagaaccccgttagcaccggtcacctcacagagaac
cccgttagcaccggtcacctcacagagacaccgttagcaccggtcacctcacagagaacc
ctgaagggaaatagcagagttctcatcgctgcgctcctgttgctgttcgcccgttgtgat
ggaaacgcgtcgcagcctcagggagactcacctcgagcgcactgtatcaccagcctggag
ggacggttgtgtactctgtctgaaacccatctgaatggttctggtcctaccagactagag
gtccctgctggacagaggctcctgatcaccatgcagagcctcccaggagaccctgtctgc
agctggagccgtggagctgacccaaaaagaaggggctattccttgaccatactacagaca
catgtgagtgattctggagagtacacattcagctgtgagagaggcgggatcaactcctct
ctgaccctctctctactggtcgtacctctgctaagacttcccacaaaaccacagctgaaa
tttatccctgggaaaagaggcttcttaccagactatcagtgttcttcagagggaaaccct
aagcccaagatcaaatggttcaacaaccttgacaagactggaaaaggtaatgatgggaca
gacattccctccacgatcaaagagagggctaacaacaaagagaaaagtaaaaattacttc
aggacaacagtcatgtgctgtgctagcaattctcagggagaggcgtgttctcaacaatat
gattacgatctggaccgtgccagtgatgaggatgatgaggctccagagatcactgtgagt
cctgggcagcccctgctgctcagctgtcggcagaaagagaacagcaccgcacagtggctg
cctgacaaccagagacaagtctccatataccaactcacatataaagaaatatatatgacc
tacctgttcattgagtcggtgacagtgaaccacagtggaatctatacatgccgaggcaac
aagaacaaggtcaaatccacccatgtccaggtcctggagaagggcttcatttccatcgac
cagctgaatgagagcagtaccatctcagcccaggagaagccagggttctgtctgcgggcc
ctggtctcctcacaccctctcctacgctgccattggctgggtccggacagcagacagacc
cagtgccctgagcccacacggctctggaagagcaggactctggagttgtgtaacacagaa
ccaggagagtatcagttacacctggaggctggggagctgaacctcacacagaccctctct
ctgtgtgtggcaggtacgtccacccccagtctcttacagaatggagacaatatcacctgt
gagaccaacacccccctccccttcaaccttacctggagctcctgctctttgaccaatgac
agctgtcagtcagagtctgcagcctggaaggagatccctgccccacccccgaagctctct
gactcagaccagttctgtcataagaggatcctcagtacccggtacagtacggaggtgggg
gactttgtcaagtgctgcatcacaaactctgtccactcacagtctcactgcagtgagaca
ctgttcaacatacaatctaaatctgttccaccagcctcctctcaactcctcctgaaagtg
tccagtctggtcctgttcctggctttgatgctggtcagcctggcgctgctctacttcatc
aggaagaagaaaccccagtaccagagtcagctgcagatgatccagatggttgggcctaat
gacaacgactacatctacatcaacttcaaagacttccagtatgaccagaaatgggagttc
cccagagagaacctggagctggggaaggagctgggctctggggcctttggcatggtgctt
caggctacagcctacggcatcagcaagccgggagtctccctgcaggtggctgtcaagatg
ctgaaagagaagcatgagaccgtagagaaggaggctctgatgtcagagctgaagatgctg
actcacatcggacagcatgccaacatcgtcaacctgctgggggcatgcactggctcaggg
cccacgtacctgatatttcagtactgccgtaacggggacctgctgaactacctgaagaac
aacagagagctctaccacaagtctctgaccgacgccttcaccagggaccgcttcagcaga
ctttaccataacctgcccaagaggagctccagtgagttccagaggccagtggacagcata
tacatccccatgtcccccaccaccactagagggcaagagagcatcgccctgatcagcctc
aactcttctcccatgaacacatctgatggtccagggatgtatgaggagttaaatgagctg
caggaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggag
gcgctgacctacgacgacctgctcagcttctcctatcaggtggccaagggcatggacttc
ctgtcctccaaacactgtatccatcgggaccttgctgccaggaacgtgttggtgactcag
ggtggactagtaaagatcggggactttggactggcccgggacatcgacaatgactccaac
tacgtagtgagaggaaatgtgcgtctgccagtgaagtggatggctccagagagtatcttc
caggggatgtacaccatgcagagcgatgtctgggcctatggtatcctgctgtgggaggtc
ttctctctgggtgtgaccccctacccagggataaaggtggacaacaacttctatgtgatg
atagagagaggttttaagatggagcagccgtactacgccagtgaatctgtgtattcgatc
atgtgtaagtgctgggccttggagcctcaggaccgccctcacttctccaagctggtggcc
ttcatggacgaccaactggctgacatggaggagaagctctaccataacatcctggacaag
cgctgcagtcatgtgttataccagaatgcaccggtgaaatctgatctctcagccttggcc
aaagaaaagggtcatcaagcacagtcacagaaccaatactgcaagacccactccactgga
gaggccccaacaacactgtctgacagggttgccatggagactgatgatgacaatcctctg
aaaccatgtcagtga
DBGET
integrated database retrieval system
