Oncorhynchus kisutch (coho salmon): 116355095
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Entry
116355095 CDS
T09179
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
oki
Oncorhynchus kisutch (coho salmon)
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oki04515
]
116355095
Cell adhesion molecules [BR:
oki04515
]
Cadherins
Protocadherins
116355095
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
116355095
NCBI-ProteinID:
XP_031654425
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Position
LG19:complement(31895145..31899144)
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AA seq
832 aa
AA seq
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MTKRMGYRDWRWLALWWNNFFLLWSTIDGQTRYTISEELKQGSVVGNLAKDLGLGLSDFF
DRKLRVASEAGKQYFNVDAGKGELIVNERIDRETLCGQSASCVLPLQVVIENPLQLHRIE
VEIRDINDNSPSFLTKELTLKIAESTVAGARFPLESAEDPDVGSNSLKSYTISKDECFTL
KVKELGNGKKIPELVLEKPLDREKKSVHKLLLTALDGGNPVRSGTAEITITVLDVNDNFP
VFEKSVYKVSVHENSAKGTFMIKLKATDIDEGQNGDINYSFGERTPESVLSTFNMDPDTG
DIFLKGNLDFERATTYDIDITARDEGTPEMEGHCRVQVEVIDVNDNSPEIVLTSQPNPVR
ENAPSGTVVALISARDLDSGNNGKVTLQLPRGYPFSLKPSFSNNYALVTSDVLDRESFSE
YNIEITATDSGSPPLTTKKTIPVTIIDVNDNPPKFSQPFYNVYLKENGLPGSMLSSVSAS
DLDFGDNAKISYSILDSKVQDVSMSSYVYMNTDNGSIYSMHSFDYEKIKVFQILVQAKDH
GSPSLSSNVTVHVFILDQNDNAPTVIYPSAALGSLSHQKMPRSAKAGHLVTKVTAVDADS
GHNAWISYKLVEATDTSLFSVNIYTGEVRTKRAVSEQDDSSQRLLIEIQDDGVPVQSATV
TLTILVEDGLHELISDLRQNAPEPSKKSGRITLYLILSLASVSVLSLVTFVILAVKCVRN
SRSSGSCCMRRDDLDGYKNPNRNLQIQLNTDGPIKYVEVLGGDMLSQSQSFRSCLSPMSE
FSDFTFVKPSSTTDFKEMINVLDASLPDSAWTFESQQVSTVVTCSLIVTLGY
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagagaatgggatacagagactggagatggctggctctttggtggaataatttc
tttctcttgtggagtacaatagacggacagactcgctacaccatctcggaggaactgaaa
cagggatctgtggtaggaaatctagccaaagatctgggtttgggactatctgattttttt
gaccgtaaactgcgtgtcgcttctgaggctggtaagcagtatttcaatgtggatgcgggg
aagggcgagctgatcgtgaatgagagaatagacagagagacgttatgcggacaaagcgcc
agctgcgttttacctctgcaggttgtcattgaaaacccgttacagttgcaccgtattgag
gtggaaatacgagacataaatgacaattcgcctagttttcttacaaaggagctcacattg
aaaatagcagaatcgacagttgcgggcgcacgttttcctttggagagtgcagaggaccct
gacgtgggcagtaattcccttaaatcctatactattagtaaagatgagtgttttacgttg
aaggtaaaggagcttggtaatggaaagaaaataccagaactagttttagagaagccctta
gaccgagagaaaaaatctgtccataaactactgttaacagctctagatggaggtaatcct
gtcagatccgggacggcagagataactattactgtgcttgacgtaaacgataattttcca
gtatttgaaaagtctgtgtacaaggtttctgtccacgaaaatagtgcaaaggggacattt
atgattaaacttaaagcgacagatattgacgagggtcaaaatggggatataaactattcg
tttggtgagcgcacccctgagtctgtgctttctacatttaatatggatccagacacaggg
gatatttttttgaaggggaatttagatttcgaaagagctacaacatatgacattgacatc
acggcgagagatgaaggcactcctgaaatggaaggacactgtcgcgtgcaggtagaggta
atagacgttaacgacaattcgcctgaaattgtcctcacttcccaaccaaacccggtgcgc
gagaacgcgcccagtggcacggtagtagctttgatcagtgcccgggaccttgactccggt
aataacggtaaagtgacgttacagctcccacgaggttatccttttagtctgaaaccgtcc
ttttctaataattacgcactggtcacaagtgatgttttagacagagagagtttctcagag
tataatattgagataacagccactgattcgggctcccctcccctgactaccaagaaaacg
ataccagtcactatcattgatgtcaacgacaacccccctaaattctctcagcccttctat
aatgtatatttaaaagagaatggactaccaggatccatgctatcctcagtatctgcatct
gacctggatttcggagataatgccaagatctcctactccatcttagactccaaagtgcag
gacgtttctatgtcttcctatgtgtacatgaacactgataacggcagtatctatagcatg
cactcatttgactatgagaaaataaaggtgtttcagattctggtgcaggccaaggaccat
ggctctccctctctgagcagcaacgtcactgtccatgtttttatcctggaccagaacgac
aatgcccccactgttatttacccctccgctgccctgggctcgctctctcaccagaagatg
ccccgctccgctaaagcaggccacctcgttactaaggtaacggccgtggacgcagactcg
ggccataacgcctggatctcatataaactggtggaggccacagacacgtctctgttcagt
gtcaatatttacacgggggaggtaaggactaaacgtgctgtgtccgagcaggacgactcc
tctcagaggctgcttatagagatacaggatgacggggtgccggtccagtccgccacggtc
acactgaccatactggtagaggacgggctccacgaactcatctcggacctgcggcagaat
gcgccagagcctagcaagaaaagcgggagaatcaccctgtatttgattctctctctggcc
tcggtgtccgtgctgtctctggtcacttttgtcatcttagcagtcaagtgcgttagaaac
agcaggagcagtggtagttgctgcatgagacgggacgacttggacggctacaagaacccc
aacagaaacctgcagattcagctcaacactgacgggccgattaagtacgtggaggtcctg
ggaggggacatgttgtctcagagtcagtccttcaggtcatgtctctctcccatgtcagag
ttcagtgatttcaccttcgttaagcccagcagcaccactgactttaaggagatgatcaac
gtcctagacgcgtctttacccgacagcgcctggacctttgagagccagcaggtgagcact
gtagtgacgtgtagtttaattgtgacactaggctattga
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