Oncorhynchus kisutch (coho salmon): 116358882
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Entry
116358882 CDS
T09179
Name
(RefSeq) guanine nucleotide exchange protein smcr8a-like
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116358882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oki04131
]
116358882
Membrane trafficking [BR:
oki04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
116358882
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCR8_C
Folliculin
RecX_HTH3
Motif
Other DBs
NCBI-GeneID:
116358882
NCBI-ProteinID:
XP_031667018
Ensembl:
ENSOKIG00005029534
UniProt:
A0A8C7I8L4
LinkDB
All DBs
Position
Unknown
AA seq
1004 aa
AA seq
DB search
MIGSPDVLAFTSEGDLGGYPDVQVLPEEFSLPLLPLSHPWTSPAHFNRDFILVAEFSEQV
GPLPVRTIPDDPRVIGSFDLNHFSLRIMSVDYQAAAPGPQPHHQTASPSLQTLPRLAFSE
DSRVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYVSADERKIMLQFQELSLRFSRA
SECLKTGNRRAFACELQRKLHDLEYTRSILQAALQRISNESAEIREEAELQKTANELASV
DRSILDHRSLLHQVTSYPNRKLKDPGFLPYDPSLIPETLPLTPDPPSPSYTPQLVSGASL
GGGGWSARRFDRRLKPLEELSDCYFLSLTLEQLGNAERRLRGDQSVLHNRRITHRLSRTL
SHTQFLFQLWDQEEEEDLEEEGAGLEGGSGVMSHPVVGAGPQSLESFFSCVEEVSIKLET
GSGGAEPTLDPEGEGVTAETRPGSVSSGDSIEVLGTERSYRTQGLTHMELRELSGGLGQG
EGCDVVRSCAPAEVWMRRDVRSLARRANSEDSIEIISTSDSIFPDDLIFNAITEEEPEEH
GIMGSVIQEEEEEEAAGEDTPIQQHSTLGIVVHEEEEQTRHQRILGNIVQTEGKEELEDT
PTRLHRTLGIEVRELEEEKPERWDTPAPLSEPQRTLVHQVSVEGSSQQYEGHHANGEVRG
QAGRDSRRVVVPDLQVNFSIPLRLDVRGRGSGGRRLLGDTAYRLSVDEASDCMSNISTSP
SSSLPPTHLHGNHSASNPRRHQRQRRKAGPGALRFLRQNSFSQNAVFCLLSGRPLVVIGG
EEASVRRTVAALSLYLPSPGRYGDAVQPYLATPLQLTDLLTWRLIGIHRTSPTAPSMLHS
LARYGRYLAVLDLDQRTLRSPAYHGHLIGRLANPHTLIGRGSTYLLHVESCLAELTAKAF
LFSCSPDLSTLTSGRAQSSPGGQAPPICHSHSDLQLPSLPREDDDFTLTQRRRDFLCGRG
FSGEDDLRVMHFLSDLIKQHHAGSGPPALRFSYSAVPLHRNITT
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgattggatctcctgatgtgctggccttcaccagtgaaggggatttgggggggtaccca
gacgtccaggtcctgccagaggagttctccctccctctccttcccctctctcacccctgg
acctcccctgcccatttcaacagggacttcatactggtggctgagttctcagaacaggtg
ggtcccctaccggtccggaccatccctgatgaccccagagtgatcggttccttcgacctg
aaccatttctctctacgcatcatgtctgtcgactaccaagccgcagcccctggtcctcag
ccacaccaccagacagctagtccttccctccagaccctcccccgtctggccttctcagag
gactccagggtggttctgggtgactctaaggagggggcgtttgcctacgttcaccacctg
acgctctatgacctggaggcccgaggcttcgtccgcccgttctgcatggcctacgtctct
gccgacgagaggaagatcatgctgcagttccaggagctgtcgctccgcttctcccgcgcc
tccgagtgcctgaagaccggaaaccgacgggcctttgcctgcgagctgcagaggaagctt
catgacctggagtacacacgatccatccttcaagcagcgcttcaaaggatatccaatgag
agtgcggagatcagggaggaggcggagctgcagaagacggccaacgagcttgctagcgtg
gatcgttccatcctggaccacagatcgctcctccaccaggtcacttcctatcccaacagg
aagttaaaagacccaggctttctgccctacgacccctccctgatcccagagaccctcccc
ttgactcctgatcccccctccccctcatacaccccccagctggtttccggggcatcgcta
gggggcgggggctggtcagcgaggcggttcgaccgccgtctgaagccgttggaggagctg
agcgactgctacttcctgtctctgacgctagaacagctgggcaacgcagaacgccgtctc
cgtggagaccagagtgttctacacaaccgtcgcatcacacacaggctctccaggacgctt
tcacacacacagttcctgttccagctctgggaccaggaggaggaggaggacctggaggag
gagggggcggggctagagggaggaagcggtgtgatgtcacatcctgtggtgggggcggga
ccacagagcctggagtcgttcttctcctgtgtggaggaggtgtcaatcaaactggagaca
ggaagtggaggggcggagccgacacttgatcctgagggagaaggagtaaccgcggagacg
agaccaggcagtgtgagcagtggagacagcattgaggttctggggacggagcgctcctat
agaacacagggactaacccacatggaactcagagagttgtctggtgggttgggtcagggt
gaaggctgtgatgtggtgcggagttgtgcccctgcggaggtgtggatgagacgtgacgtg
cggtccctggcacggagggcgaacagtgaggacagtattgagatcatcagcacctcagac
tccatcttccccgacgacctcatcttcaacgccatcacagaggaggagcctgaggagcat
ggaatcatgggtagtgtaatccaggaagaggaggaggaggaggcagcaggtgaggacacg
cccattcagcagcacagcaccctgggtattgtagttcacgaggaggaggagcaaactcgg
caccaaagaatcctgggtaatatagtccagacggagggaaaggaggagctagaggacact
cccactcggctgcaccgcaccctgggtattgaagtccgggaattggaggaggagaagcca
gagagatgggacactccggcccccttgtctgagccccagagaactctggtccaccaggtg
tcagtagagggctcctcccagcagtacgagggtcaccatgccaacggcgaggtcagaggt
caggctgggcgtgacagcaggcgggtggtggtgcctgacctccaggtgaacttttctatc
cccttgaggttagatgttagaggtcgggggtcaggggggcggcggttgctaggcgacacc
gcttacaggctgagtgtagacgaggcatcggactgtatgagcaacatcagcacctctcca
tcttcctctctgccccccacacatctccatggcaaccacagcgctagtaatccgcgacga
catcagcgccagaggaggaaggcgggtcctggagccctcaggttcctgcggcagaattcc
ttctcccagaatgctgtgttctgcctgctaagtggacggccgctggtggtgattggtgga
gaggaggcttccgtgaggaggacggtcgctgccctctcgctctatctgccttcacctggt
cgctatggagatgctgtgcagccttacttggccacgcctcttcagctgacagacctgctc
acctggagactcattggaatccacaggacgtctcctacagctcccagcatgcttcactct
ctggctcgttacggacggtacctggccgtgctggacctggaccagcgtacactgagaagc
cccgcctaccacggacacctcattggccggctggccaacccccacactctgataggtcgt
ggcagcacctaccttctccacgtggagagctgcctcgctgagctgaccgctaaggctttc
ctgttctcctgttctcctgacctttcaactctaacatcgggtagagctcagagttcacct
gggggtcaggcaccccccatctgccacagccactctgacctccagcttcccagcctcccc
agggaggacgatgacttcacgctgactcagcgtcgcagggacttcctatgtgggcggggt
ttcagcggggaggatgacctccgggtgatgcacttcctgtctgacctcatcaaacagcac
cacgcaggaagtggtcctccggccctccgcttctcctacagtgccgtccctttacataga
aatatcacaacatag
DBGET
integrated database retrieval system
