Oryzias latipes (Japanese medaka): 100049293
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Entry
100049293 CDS
T02443
Symbol
coll
Name
(RefSeq) collagenase precursor
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ola01002
]
100049293 (coll)
Peptidases and inhibitors [BR:
ola01002
]
Metallo peptidases
Family M10
100049293 (coll)
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Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
DUF4953
Reprolysin_5
Reprolysin_4
Motif
Other DBs
NCBI-GeneID:
100049293
NCBI-ProteinID:
NP_001098185
UniProt:
Q4AED4
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All DBs
Position
14:complement(30506994..30509726)
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AA seq
470 aa
AA seq
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MRTVCALLGLLAAVHCMPVSQETMEEQRFAQSYLKNFFNLTEEAGPAVRRGFSQVTSKLI
EMQTFFGLQITGTLDAETLAMMKKPRCGVSDSRVARFSTFGNNLKWEKNSLTYRITNYTP
DMSKEEVDESIEKALQVWARVTPLRFTKIYSSTADIMVSFGQRAHGDYYPFDGPDGTLAH
AFAPAPGIGGDAHFDDDETFTFRSNTGYVLFMVAAHEFGHSLGLSHSDDPGALMYPIYSY
RNPETFVLPRDDVRGIQSLYGPNLDPAQPEPTAPPTPDACDSTMVLDAVATLRGEMFFFK
DSFFWRVHPQSYTPQQTFITNFWPDAPLSVDAAYENQQSDRIFLFKGRQVWAFRGYDLVQ
GYPQAISSFGLPKRIEKVDAALYDAQSGKTLFFVGRNYYSYDEAKGTMDAGFPKAVDQKF
SGMSGRVTAALQYRGFAYLYSGPYMFEYSLRTGQLLRLLRNSYFLPCTSY
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaggacggtgtgcgctctgttgggcctgctggctgcagttcactgcatgccggtgtca
caggaaacgatggaggagcaaaggtttgctcagagctacctgaaaaactttttcaacctg
acggaggaagctgggcctgcagttcgacggggtttcagccaggtgaccagtaagctcata
gaaatgcagacgttttttgggctccaaattactgggactttggatgctgagactttggct
atgatgaaaaagccccgatgtggagtttctgactctagagttgctcgtttctctaccttt
ggaaacaatctgaagtgggagaaaaacagcctcacctacaggatcacaaactacacacct
gacatgtctaaggaagaggtggatgagtccatagagaaagctctgcaggtctgggccaga
gttacacctttgaggttcaccaaaatctacagcagcacggcagacatcatggtttccttt
ggtcagagggctcatggggactattacccttttgatggtcctgatggcacccttgcccat
gcctttgccccggcccctggcattggaggagacgctcactttgatgatgacgagacgttc
acctttcgctcaaacactggttatgtgcttttcatggtggcggctcacgagttcggccac
tctctgggtctgtctcactcggatgaccccggtgctctcatgtaccccatttactcgtac
agaaaccccgaaacctttgtcctgcccagagacgacgtcagaggcatccagtcgctgtat
ggtccaaacttggaccctgctcagcctgaaccgaccgccccccccacccctgatgcctgt
gattccaccatggtcctggatgctgttgctacactgagaggagagatgtttttcttcaag
gacagctttttctggagggttcatcctcagagttacacacctcagcaaactttcatcaca
aacttttggcccgatgctcctctcagcgtcgatgctgcttatgaaaaccagcaatctgac
agaatcttcctcttcaaaggtcgacaagtgtgggcttttcgtggctatgaccttgtgcag
ggttatccccaggccatctctagttttggcctgcctaagcgcatcgagaaggtggatgca
gctctgtatgatgcacagtctggcaagaccctcttctttgtggggagaaactattacagt
tatgatgaggccaaagggacaatggatgcagggttccccaaagcagtggaccagaagttt
agtggaatgagcggcagggtgacagcagctttacaatacagagggttcgcatacctctac
agcggcccatacatgttcgagtacagcctcaggaccggccagctgctccgcctgctgagg
aacagctacttcctgccctgcaccagctactag
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