Oryzias latipes (Japanese medaka): 100125525
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Entry
100125525 CDS
T02443
Name
(RefSeq) carcinoembryonic antigen-related cell adhesion molecule 5 isoform X1
KO
K06454
T-cell surface glycoprotein CD4
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03250
Viral life cycle - HIV-1
ola03260
Virion - Human immunodeficiency virus
ola04060
Cytokine-cytokine receptor interaction
ola04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100125525
03260 Virion - Human immunodeficiency virus
100125525
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
100125525
04514 Cell adhesion molecules
100125525
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ola04090
]
100125525
CD molecules [BR:
ola04090
]
Proteins
100125525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
ig
Ig_3
Ig_2
I-set
Izumo-Ig
Receptor_2B4
Ig_7
EphA2_TM
LRR19-TM
TM_ErbB1
Cadherin_C_2
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
100125525
NCBI-ProteinID:
XP_011483771
LinkDB
All DBs
Position
16:20557523..20582911
Genome browser
AA seq
456 aa
AA seq
DB search
MKMLIQHLLILIFLSKAAGAGEIFLAQVGDDVTLTVSKPSSNVYMYWYKKDTEIASINNL
GGKFPAETSLKKKLIVGDNSLTIKSIGENDFGKFKCEIKDSSKNPQGTPIEFNVIKLKVG
VNPTEPLLPSQTATLTCEVETPPGLAKITTKLISPHGNEIPRGKHVIEAKSQNSGLWTCV
ANNKKKVSISVSVVDFQTPTLPYQYTSENSPFLVPFSIPPNIQWDYIKNVTQKIEWFFTP
KTSSVATKLFSLSMKEPFKPEVGQGRNLKHFNFNKGDFSLGRNKGQKDDAGTYTCSITFN
DEKTRKSTRKFEVLQIIPYPGAQLTSGQKLKLSCTTGEPLAPDMQLKWVFPQKSPRLPPD
QHSANLTFPEVRIDDSGNWECELWWNNTSLASAVIRLQIEPILNTWQLVVVCVVGVILLV
LLVFIFIRCRRHQKPRRLRHQFCRCKNPQPKGFYRT
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgctcattcagcatttgcttattctcatttttctgtccaaagcagcaggggct
ggtgaaatctttttggctcaggtgggagacgacgttacacttacagtctcaaaaccgagc
tctaatgtatacatgtactggtacaaaaaggacactgaaattgcttcaataaacaacttg
gggggaaagtttccggcagaaacatccttgaaaaagaagctaatcgtgggtgataattca
ctgaccataaaaagcataggagaaaatgactttggaaagttcaagtgtgagattaaggac
agttccaaaaatccacaagggacacctatagagttcaacgtaatcaaacttaaagtgggt
gtgaatccaactgagcctttgctcccatcgcagacagcgaccctgacctgtgaggtggaa
actcctccaggtttagctaaaatcacaacaaaattgataagtccccatggaaatgaaata
cctagaggaaaacatgttatcgaagccaaaagtcaaaacagtggactgtggacctgtgtt
gcaaataataaaaagaaggtctccatttctgtttcagttgtggactttcagacacctact
ctgccatatcaatatacatctgaaaactcccccttcttggtccctttctccattcctccg
aacatccaatgggattacatcaaaaacgttacccagaagattgagtggttcttcactcca
aaaacatcttcagttgcaacgaaactcttctctctctcgatgaaagagccattcaagccg
gaagtgggccagggaagaaaccttaaacacttcaacttcaacaaaggagatttttctttg
gggagaaataagggacaaaaggatgatgcggggacctacacatgctccataacatttaat
gatgaaaagactagaaaaagcacaagaaaatttgaagttttacaaattatcccttaccca
ggagctcagttaacctctggccaaaagcttaaactgtcctgcaccactggcgaacctctg
gcccctgatatgcagctgaagtgggtttttccccaaaaaagcccccggctgccacctgac
cagcattcagcaaatctcacttttccagaagtgagaattgatgacagtggaaattgggag
tgtgagctgtggtggaataacacaagtctggcgtcggctgtcataagacttcagattgaa
cccatactgaacacatggcagctcgtggtagtatgtgtcgtgggagtcatcttacttgtc
cttcttgttttcattttcatccgctgcagacgtcatcagaagccgaggcgtctcaggcat
caattctgcagatgcaaaaacccccaacccaaaggattctacaggacataa
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