Oryzias latipes (Japanese medaka): 100170634
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Entry
100170634 CDS
T02443
Symbol
a-sdf1a
Name
(RefSeq) stromal cell-derived factor 1a precursor
KO
K10031
C-X-C motif chemokine 12
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04060
Cytokine-cytokine receptor interaction
ola04672
Intestinal immune network for IgA production
ola04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
100170634 (a-sdf1a)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
100170634 (a-sdf1a)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
100170634 (a-sdf1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ola04052
]
100170634 (a-sdf1a)
00536 Glycosaminoglycan binding proteins [BR:
ola00536
]
100170634 (a-sdf1a)
Cytokines and neuropeptides [BR:
ola04052
]
Cytokines
Chemokines
100170634 (a-sdf1a)
Glycosaminoglycan binding proteins [BR:
ola00536
]
Heparan sulfate / Heparin
Chemokines
100170634 (a-sdf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
100170634
NCBI-ProteinID:
NP_001123863
UniProt:
B3KYI4
LinkDB
All DBs
Position
15:complement(23734662..23738277)
Genome browser
AA seq
98 aa
AA seq
DB search
MDVKLFALTAALTMAIYAPQTHAKPISLAERCSCRSTVNNVPRSFIRELKFIHTPNCPFQ
VIAKLKTNRELCINPEARWLQQYLKNALTKMKKAKQII
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgaagctctttgcgctcacggccgctctcacaatggcaatttatgcgcctcaa
acacacgcaaagcccatcagtctggctgagcgatgcagctgccgttcaactgtcaacaac
gtcccacgaagtttcatccgagagctcaagttcattcacacacctaactgccccttccaa
gtgattgctaaactgaagacaaacagggagctgtgtatcaatccagaggcgcggtggctt
cagcagtacctgaagaatgctcttactaagatgaagaaagccaagcagatcatctga
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