Oryzias latipes (Japanese medaka): 101154842
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Entry
101154842 CDS
T02443
Symbol
plod3
Name
(RefSeq) procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 isoform X1
KO
K13646
lysyl hydroxylase/galactosyltransferase/glucosyltransferase [EC:
1.14.11.4
2.4.1.50
2.4.1.66
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola00310
Lysine degradation
ola00514
Other types of O-glycan biosynthesis
ola01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
101154842 (plod3)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
101154842 (plod3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ola01003
]
101154842 (plod3)
Enzymes [BR:
ola01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.4 procollagen-lysine 5-dioxygenase
101154842 (plod3)
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
101154842 (plod3)
2.4.1.66 procollagen glucosyltransferase
101154842 (plod3)
Glycosyltransferases [BR:
ola01003
]
O-Glycan biosynthesis
O-linked Gal type
101154842 (plod3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GT_PLOD
2OG-FeII_Oxy
OGFOD2-like
Anp1
2OG-FeII_Oxy_3
DUF6492
Motif
Other DBs
NCBI-GeneID:
101154842
NCBI-ProteinID:
XP_023821821
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Position
18:complement(179624..225917)
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AA seq
812 aa
AA seq
DB search
MFPVSFLHLSRQFPPSFLDVSCQFYPLVFFLTVLFRVLLSFWFSVPVWVSAPPEAPKEQK
EVFAPPPPLTFLRNVTLDVSGLNSRTCENLLVITAATEETDGFRRFMRTAREFNYKVQVL
GLGEDWRGGDVARTVGGGQKVRWLKKELLKHSEEAELVIMFVDSYDVVLAAGPGELLAKF
SRLGHRVVFSAEGFCWPDQRLASKYPQVHSGKRYLNSGGFIGFAADLSAIVQQWTLKDDD
DDQLFYTRIYLDRNQRNKFNITLDHRSQIFQNLNGAIDEVVLKFEKGRARVRNVAYDTLP
VVIHGNGPTKLQLNYLGNYVPTAWTYENGCGVCDIDLRLFDDTPDEQMPLVHLAVFIEHP
TPFMEEFLERLTTLNYPHSRLRLFIHNNVVYHEQHIQNFWLRHKNLFPNALLVGPEENLE
ENQARTMAIKWCPHLSPLSHHVSWVCKNNEACRKDLDCEFFFSLDSDVALTNPDTLRILM
EENKSVIAPMLSKHGKLWSNFWGALSPEGFYSRSEDYIEIVQAKRVGLWNVPYISQVYLV
KGSVLRSKLSHLNLFVDQGMDPDMVFCKNVRDQGVFMFVSNRDEFGRLVASSNFNTSRLH
PDMWQIFDNPLDWREKYIHENYSKIFEDQDGFVEQPCPDVYWFPAFSEKMCDQLVETMED
YGVWSGGSHKDERLSGGYENVPTVDIHMNQIGFEKEWLKFLKDYIAPVTEKLYPGYFPKA
QAIMNFVVRYRPDEQPSLRPHHDSSTFTINIALNRKGVDYEGGGCRFLRYDCKVESPRKG
WSFMHPGRLTHYHEGLPTTRGTRYIMVSFVDP
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgtttcccgtcagtttcctccatctttcccgtcagtttcctccaagtttcctggacgtc
tcctgtcagttttatcctctggtgtttttcctcaccgttcttttccgtgttctcttgagt
ttttggttttcggttcctgtctgggtctcagcccctcctgaggctcctaaggagcagaag
gaggtttttgctcctcctcctcctctgaccttcctcaggaatgtgaccctggatgtttca
gggttgaactcgaggacttgcgagaacctgctggtcatcaccgcagcgaccgaggagacg
gacggcttcaggcgcttcatgaggacggcccgagagttcaactacaaagtccaggttctg
ggtctgggggaggactggcgcggtggagacgtggctcggacggtggggggcgggcagaag
gtcaggtggttgaagaaggagctgctcaaacactcggaggaggcggagcttgtgatcatg
ttcgtggacagctacgacgtggtcctcgccgccggtccgggggagctgctcgccaagttc
tcccgtctgggtcacagggtggtgttctccgccgagggcttctgctggcccgaccagcgc
ctggcctccaagtacccccaggtgcattctgggaagcgttacctgaactctggagggttc
attggcttcgcggcggacctcagcgccatcgtccagcagtggacgctcaaagacgatgac
gacgaccagctgttctacaccaggatctacctggaccggaaccagaggaacaagttcaac
atcactctggaccaccgatcccagatcttccagaacctgaacggagccatcgacgaggtg
gtcctgaagtttgagaaggggcgggcccgagtgaggaacgtggcctacgacacgctgcct
gtggtcatccacgggaacggacccaccaagctgcagctgaactacctgggaaactacgtt
cccacggcgtggacctacgagaacggctgcggcgtctgtgacatcgacctgcggctcttt
gacgacacacctgacgagcagatgccgctggtccacctcgccgtcttcatcgaacacccc
acccccttcatggaggagttcctggagcggctgaccacgctcaactacccccacagcagg
ctccgcctcttcatccacaacaacgtggtttaccacgagcagcacatccagaacttctgg
ctgcgccacaagaatctgttcccaaacgccctgctggtcggacccgaggagaacctggag
gaaaaccaagccagaaccatggccataaaatggtgtccccacctttccccactcagtcac
catgtatcatgggtctgtaaaaacaatgaggcctgcaggaaggacctggactgtgagttc
ttcttcagtctggactctgacgtggctctgaccaacccggacactctgaggatcctcatg
gaggagaacaagtcggtcatcgcgcccatgctgtccaaacacgggaagctgtggagcaac
ttctggggcgccctgagtcctgaggggttctactccaggtctgaggactacatcgagatc
gtgcaggccaagagggttgggctgtggaacgtgccgtacatctcacaggtgtacctggtg
aaaggcagcgtgctgaggtccaaactgtctcacctgaacctgtttgtggaccaggggatg
gatccggacatggtgttctgcaagaacgtccgcgaccagggcgtcttcatgttcgtgtcc
aaccgtgatgagtttggccgtctggtggcgtcctccaacttcaacacgtccagactacac
ccagacatgtggcagatctttgacaacccgctggactggagggagaagtacatccatgag
aactactccaagatctttgaggaccaggatggctttgtggagcagccctgtccagacgtc
tactggttcccggcgttctctgagaaaatgtgtgaccagctggtggagaccatggaggac
tacggcgtgtggtctggaggatcccacaaggacgagcggctctccggcggctacgagaac
gtcccgaccgtggacatccacatgaaccagatcggctttgagaaggagtggctgaagttc
ctgaaggactacatcgcccccgtcaccgagaagctgtaccccgggtacttcccaaaggcc
caggccatcatgaacttcgtggtccggtaccgacccgacgagcagccgtccctgcggccg
caccacgactcctccaccttcaccatcaacatcgccctcaacaggaagggcgtggactac
gagggagggggctgcaggttcctgcgctacgactgtaaggtggagtctccccggaagggc
tggtccttcatgcaccccggccggctgacgcactaccacgagggtctgcccaccaccagg
ggcacccgctacatcatggtctcctttgtcgacccctag
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