Oryzias latipes (Japanese medaka): 101155929
Help
Entry
101155929 CDS
T02443
Symbol
pkp1
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ola04812
]
101155929 (pkp1)
Cytoskeleton proteins [BR:
ola04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
101155929 (pkp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
HEAT_EZ
HEAT
HEAT_2
Atx10homo_assoc
Nipped-B_C
Motif
Other DBs
NCBI-GeneID:
101155929
NCBI-ProteinID:
XP_011475450
UniProt:
H2LWI0
LinkDB
All DBs
Position
7:complement(13404994..13419836)
Genome browser
AA seq
712 aa
AA seq
DB search
MMSPEPLRSAMVNDVGEDTSLALPSDNGLSTGQQRVLTQVNTIKRSKFKQSKKIISPPPS
SMTLQTSTTSSDFGSFKFSPTKVNGTFSHTNFSKSAGFSRGVNSQRSRTLSAKGGRYISS
SGVWDQQVNSRTKSQKSNGLKHSRSDPVLTGPGSVPSAQSMRVKGQMPQGQTTSQVQINR
NTTSFMVNDVSVANTLRSPSFHSQQEGKLGTLKTSKTEQRSVVHPTMSTSDMTLKQAVAF
LAYKEESCQHRGASFIQHTTFKEHKAKTEVLQLGGIPPLVTLLRSPNPDVSQAAAGALRN
LVFNHKQNKLEVQHCSGIAKALQLLKETDSTETQKQITGLLWNLSSAEELKKELTSTAMP
VLTEHVVRPFTVLSDTITHVDPGVFNCATGCLRNLSCGEEKERKSMRDCPGLIDSLMAYI
QSCVAEKNPDDPSVENCTCILHNLTFQLEEECPESFSHYHLSAEAQQDTKKKSSVGCFSP
RSSKAQKELIYDMEKAPTADSEVSGVQWLWHPKAVETYLSLLTSSENDATLEASCGALQN
LTAGRKGSSALSGVLLEKLKAMHVLPSLLKSPKKPLQKTTLSLLGNLSRNKSSQTPMAKQ
VLSDLASLLSSGPTEMGDSDETVATACSTFRRLVHANNGLTKNVINKELIYTLADLGANE
SFPIASKEASLLLYSMWNEKNLQSIVKKLGFKKNVFVNESTTKAQHSAVCIE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtccggagccgctacgctcggcgatggtcaacgacgtcggggaggacacctcg
ctcgcgctgccgtccgacaacggcctgagcacggggcagcagcgcgtgctcacccaggtc
aacaccatcaagaggagcaaattcaaacagagcaagaaaatcatcagtccacctccatca
agcatgactctgcagacctccacaacttcaagcgactttggatccttcaagttttctcca
accaaagtaaacggcaccttcagtcacaccaacttcagcaagtctgccggcttcagcaga
ggggtaaattcccaacggagtcgtactttatctgcaaaaggaggacgatatatctcttct
tcaggcgtgtgggatcagcaagtcaacagtcgcaccaaatcccagaaatccaacgggctg
aaacacagtcgcagtgaccctgtcctgactggacctgggtctgtaccgtctgcacagagc
atgagagttaagggacagatgcctcaaggccaaaccacctctcaggttcaaataaatcga
aacaccacctcctttatggttaatgatgtgtctgtggctaacaccctccggtcaccctcc
tttcactctcaacaagaaggcaagctcggtactctgaaaacatccaaaacagagcagaga
tcagtcgtgcaccccaccatgagcacgtcagatatgaccctgaagcaggctgtggccttc
ctggcctacaaagaggagagttgccagcaccgtggagccagcttcatccaacacaccacc
ttcaaagagcacaaggccaagacggaggtattacagctggggggcattccacctctggtg
accctcctgcgaagccccaaccccgatgtgagccaggcggcagccggggcgctgagaaac
cttgtgttcaaccataagcagaataagctggaggtccagcactgtagcggtatagcaaag
gccttgcagctactgaaggagacggattctactgagacccagaaacaaatcactggcctg
ctgtggaacctgtcatctgctgaggaattgaagaaggagctcacaagcacggccatgcct
gtcctgactgaacatgtggtcagaccgttcaccgtgctgtcagacaccatcacccacgtg
gacccgggcgtcttcaactgtgcaacaggctgtcttcggaacctgagctgtggtgaggaa
aaggagaggaagtctatgagagactgtcctggcctcatcgactcactcatggcttacatt
cagtcctgcgtggcagagaaaaaccctgatgacccgtcagtggagaactgtacgtgcatt
ctccataacctgaccttccagctggaggaggaatgcccggagagtttcagtcactaccac
ctttcagcagaggcccaacaggacacaaagaaaaagtcctcagtgggatgcttcagcccc
aggagcagcaaagctcaaaaggagttgatttacgacatggaaaaagctccaacagcagac
agtgaggtgtcaggggtgcagtggttgtggcaccctaaagccgtagagacttacctgtct
ctgctaacctcctctgaaaatgacgccactcttgaggccagctgtggagccctgcagaat
ctcactgccggcagaaagggatcctctgctctgagtggggttttgctggaaaagttaaag
gctatgcatgtcctgccttctctgttgaagtcgcccaaaaaacccctccaaaagacaact
ctgtccctgctgggcaacctgtctcgcaacaagagctctcaaacccccatggcaaagcag
gtgctgtctgacctcgccagccttctctcctccgggccgacggaaatgggggactcggat
gaaactgtagcaacagcttgcagcacatttcggagactggtgcacgctaacaacgggctc
accaaaaacgtcattaacaaggagctgatctatacgctggcggacctgggcgcgaatgag
tcgtttcccatagctagcaaagaagcctcgttgctgctgtacagcatgtggaatgagaag
aatttacaaagcattgtgaaaaagttgggattcaaaaaaaatgtttttgtaaatgaatca
accaccaaagcacagcactcggccgtgtgtatcgagtga
DBGET
integrated database retrieval system
