Oryzias latipes (Japanese medaka): 101156428
Help
Entry
101156428 CDS
T02443
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04010
MAPK signaling pathway
ola04020
Calcium signaling pathway
ola04510
Focal adhesion
ola04540
Gap junction
ola04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
101156428
04020 Calcium signaling pathway
101156428
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101156428
04540 Gap junction
101156428
09142 Cell motility
04810 Regulation of actin cytoskeleton
101156428
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ola01001
]
101156428
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ola04090
]
101156428
Enzymes [BR:
ola01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
101156428
Protein kinases [BR:
ola01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
101156428
CD molecules [BR:
ola04090
]
Proteins
101156428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
V-set
VEGFR-1-like_Ig-like
VEGFR1-3_N_Ig-like
Haspin_kinase
ICAM_N
Stevor
Motif
Other DBs
NCBI-GeneID:
101156428
NCBI-ProteinID:
XP_023818434
UniProt:
H2MBY8
LinkDB
All DBs
Position
14:complement(23154133..23178233)
Genome browser
AA seq
1025 aa
AA seq
DB search
MLASVKGHTGSQNLLHFLLGMLLVWPEGGVVTLELLPSASQVLLKSNSNFSVVCSGWSPV
SWLLPQHSDNSSVLLETRDSSSTLHLFKVTWKDSGRYTCKEESADQSRHVNIFIPGEGTD
EWFIPMSSGVVMKEEEDATIPCVVSDPQLNVSLFERPSRTLVHGMVYHPALGFTGNLNDS
SYMCLASRGAEERDSRVYYVFTIVAPKRMQVELWASSRVLKQGEVLTVNCTTNYDIVFFT
WTFPRKQEVEPLMEFLPNHSRTFINITAATAADSGVYVCTVEEPKHGKKVEKNISIQVLE
RGYVYLWPVSGANVSAPLHQMVELKVEVDAVPTPTITWTRDNLSVTEETASIFTSHMTES
RYLSTMTVRQVLMNHTGSYMVTASSDNDLATFIFNLQVTVPPKILSLLSSGGNAMLCVSE
GAPPPFITWYTCHSTNRCNNGSGNWRNVSAASETVRLQENITQVTEKGIPQVRSMLMLNT
ISSLSAVRCEATNSAGGRARDLRVVSTSLFSQVIILAAVLVLVIVAAVCLIILIVLCRKR
PCYAFSWRLIESVSPDGRRVTYLDPDDLPYNSAWEISRDQVSLGQVLGSGAFGHVVEATV
SNLLPTLSTAKVAVKMLKGGEKVQSLISELKILVHLGPHLNVVNMLGACTKGAPVYLITE
FCRHGDLASYLLRNKHIFVQGDDPTRRSITDQDYMDMVTERGDPFVIKPIQELLLASADQ
QEASSPLLNDSHLLTIHDLISFSFQVCQAMNFLSSKKCVHRDLAARNVLVCDNKLVKICD
FSLARDLQKHQDYVQRGNTFMPLKWMSPESIFQNIYSSQSDVWSYGVLLWEIFSLGRCPY
PDLQKTQEICSALKRGYRMTQPEHALPHIFELMQQCWEEDPLSRPSFSSLVISLEKIMSD
GSRQHYLQLTKAFLEEQNPVTARLGEAQQHDDSHTRGSSAVEVNLHRLEVKEVEAGSSHS
ASTNPAADITAESSNAALDTDRPQLSAPPGIPQQKPGALDVTLPEKGLQLPTLSCSSDKE
EESCL
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgctggcatctgtaaaaggacacacaggaagccagaatctactgcacttcctgttgggg
atgctcctggtgtggcctgaagggggtgttgttaccctggagctgcttccttctgcctca
caagttctgctcaaatcaaactccaatttttctgtggtatgctcagggtggagtccggtg
tcatggctactgcctcagcactctgacaacagcagtgtgctgctggagacccgggactcc
agcagcacactgcatcttttcaaagtcacctggaaggattctggccgatacacctgtaag
gaggagtcagctgatcagagccgtcatgtcaacatcttcatccctggggaaggtactgat
gagtggtttattccaatgagttcaggggtagtaatgaaggaggaagaggatgcaaccatt
ccctgtgtggtgtctgacccccagctaaacgtgtcactgtttgagcgccccagcaggacg
ctggtccacgggatggtttaccatccagctctgggcttcacaggaaacctaaatgactca
tcatacatgtgcttggcctcccgtggtgctgaagaaagagactctcgggtgtattatgtt
ttcactatcgtagctcctaagaggatgcaagttgagctttgggcatccagcagagtgctg
aagcagggggaggttctcaccgtcaactgcacaaccaactatgatatagtattcttcact
tggactttcccccgcaaacaggaggtggaacctctgatggagtttttacccaaccattcc
cgcaccttcatcaatatcactgcagcaacagcagcagattctggtgtgtatgtgtgcaca
gtggaggaaccaaaacatgggaaaaaggtggaaaaaaacatcagtatacaagtgctggag
cgaggttatgtctatctatggccagtgagtggcgctaacgtgtcagctccgctacatcaa
atggtagagctcaaagtggaagttgatgccgtccccacccccaccatcacctggacgaga
gacaacctgtcagtcaccgaggaaacagcctccatttttaccagtcacatgacagaaagc
aggtatctgagcacgatgactgtgcggcaagttctgatgaatcacactgggagttacatg
gtgactgcttccagtgacaatgatctggcaactttcatcttcaatctgcaggtcacagtg
cctccaaagatactgtctctgctgagttctggaggtaacgccatgctgtgtgtaagtgaa
ggggctccaccaccctttataacctggtacacctgccacagcacaaacaggtgtaataat
ggaagtggcaattggaggaatgtgtcagcagcctcagagactgtgagactgcaggaaaac
atcacacaggtgacagagaagggcatcccccaggtacgcagcatgctcatgctgaacacg
atcagctctttgtcagcggttcgctgcgaagccacaaactctgcaggaggacgcgcacga
gacctacgagtggtgtccacatctctcttctctcaggtcatcatcttggcagccgttttg
gtactggtcattgtggctgcggtctgcctcatcatcctcattgtcctctgtaggaagaga
ccttgttatgcattttcctggaggctgatcgagtctgtgagtcctgatggacggcgagtt
acttacctggaccctgatgacctgccctacaactcagcctgggaaatatctcgagaccaa
gtcagtctaggtcaggttttgggttctggtgcattcggccatgttgttgaggccacagtc
tctaacttgcttccgactctttctacggccaaagtagctgtgaagatgctcaaaggagga
gaaaaggttcagtctctgatatccgagctgaagattttggtccatctgggtcctcacctg
aatgttgtcaacatgctgggagcttgtacaaaaggagctccagtctacctgatcaccgag
ttctgtcgtcatggtgacctggcgagctacctgctgaggaataagcacatctttgtgcag
ggagatgaccccaccaggaggagcatcactgaccaagactacatggacatggtcacagag
aggggggatccgtttgtcatcaaacccattcaggaactgctgcttgcttcagcagaccag
caggaggcttcatcaccccttctgaatgactcccatcttctcaccatccatgatctcatc
agcttctccttccaggtgtgccaggccatgaacttcctgtcctccaaaaagtgtgtccac
agagacctggcagcgaggaacgtcttggtctgtgacaacaagctggtgaagatttgtgac
ttcagtctggcccgagacctccagaagcaccaggactatgtccagagaggaaataccttc
atgcctctgaagtggatgtctccagagagtatcttccaaaacatctacagctcccagagt
gacgtctggtcctacggggtcttactctgggagatcttctctcttggcagatgtccgtac
cctgacctgcaaaagacccaagagatctgttctgctctgaaaagaggatacagaatgacc
cagccagaacacgcccttcctcatatattcgagctgatgcagcaatgctgggaggaagat
cctctgtccagaccgtctttctcctctttggtcatttctttggaaaagataatgagtgat
ggctcccgacagcactatctgcagctgaccaaggccttcctggaagaacaaaacccagta
actgcacgattaggagaagctcagcagcacgatgactcacacacacgcggaagttctgct
gttgaggtgaaccttcatcggttggaggtgaaggaagtggaggcaggctcctcccacagc
gcttctaccaatcctgctgctgacatcactgcagaaagcagcaacgctgccctggacaca
gaccgccctcagctgtcagcccctcccggcatccctcagcaaaaacctggggctttggat
gtgacattaccagagaaggggttacagcttccaacgctgtcctgcagctctgacaaagag
gaggagagctgcctgtga
DBGET
integrated database retrieval system
