Oryzias latipes (Japanese medaka): 101158892
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Entry
101158892 CDS
T02443
Name
(RefSeq) interferon regulatory factor 3 isoform X1
KO
K05411
interferon regulatory factor 3
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04620
Toll-like receptor signaling pathway
ola04621
NOD-like receptor signaling pathway
ola04622
RIG-I-like receptor signaling pathway
ola04623
Cytosolic DNA-sensing pathway
ola05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
101158892
04621 NOD-like receptor signaling pathway
101158892
04622 RIG-I-like receptor signaling pathway
101158892
04623 Cytosolic DNA-sensing pathway
101158892
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
101158892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
101158892
04131 Membrane trafficking [BR:
ola04131
]
101158892
Transcription factors [BR:
ola03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
101158892
Membrane trafficking [BR:
ola04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
101158892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
101158892
NCBI-ProteinID:
XP_004080549
UniProt:
A0A3B3HMY4
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Position
19:complement(8113081..8120220)
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AA seq
463 aa
AA seq
DB search
MAHPKPLLMPWLWAKIENAEYQGVAWTNAEKTEFSIPWKHGLRGDSSDTDVLIFKAWAEV
SGNGRAQGDPSHWKRNFRSALRVKGFTMVSDNKNDNANPHKIYRWPEESSSRACFAAGSQ
EQTDNNVYNNFIVVDNQLVDFTEDALYLPIEDLIPGCIAGEDILQECLRGLNIDSEAEGI
TGFEPPPEQQQLQNHALIGGPPLPGQQQDPVMFVGAAGETGLPEQPACPPSRAEGGVDGD
EATALFMDTMHRTQDGNSIKTQFRILMYYRGVKVSEKLVENEAGFRLVYRPELLDSVLDV
QNGPSLVSLPGPGNMLDQVQANLTQRILNTLGDGLEVGVSGHLVYGCRRGDTKVFWSFSK
FDTSKTPQEVSKLNPATLFHFKDFLQGIINFSKGGDCPPCSLFFCLGEKWPDPQNRPWTK
KLITIEVVLTSLEILKNIAVEGGASSLQSVELQESLGEMMDLC
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggctcaccctaaacctctcctgatgccttggctgtgggccaaaattgaaaacgctgaa
tatcaaggtgttgcctggacaaacgcagagaaaacagagttctcaatcccatggaaacac
ggtctgagaggggattcctccgacacggatgttctcatctttaaggcttgggctgaggtg
agcggcaacggtcgagctcagggagatccctcacactggaaaagaaactttcgcagcgct
cttagagttaagggcttcacaatggtgtcagacaacaaaaatgacaatgctaacccccat
aaaatatatcgctggccagaagagtcttcttcacgtgcttgttttgctgctggatcccaa
gaacaaactgacaataacgtctacaacaactttattgtcgtagacaaccaattggtcgac
ttcacagaggatgctctttaccttcctatagaagatttaataccaggctgcatagccggt
gaggatatccttcaggagtgtctgaggggcctgaacatcgactctgaagcagaaggaatc
acaggattcgagcctcctcctgagcaacaacagctgcagaatcacgccctgattggtgga
cccccgttgcccgggcaacagcaggatccagtaatgtttgtgggtgcagccggtgaaact
gggttgcctgagcaaccagcatgtccaccgagtagagctgagggaggggttgatggtgat
gaggccactgcactcttcatggatacaatgcacaggactcaagatggaaatagcatcaag
actcaattcaggatactgatgtactacagaggagtgaaggtgtctgagaagctagtagag
aatgaagctggattccgcttagtctacaggcctgagctcttggattcggttttggacgtt
cagaacggccccagcctggtctctctgccaggacctggaaatatgctggatcaagtgcaa
gctaatctcacccaaaggattttgaacactctaggtgacggcctggaagtgggcgtgtcc
ggtcacttggtctacggctgccgacggggtgacaccaaagtgttttggagcttttccaaa
ttcgacaccagcaaaacaccccaagaggtgtccaagctgaatcctgctacacttttccac
tttaaggacttcttgcaaggaataataaactttagcaaaggaggtgactgccccccatgc
tccttgttcttctgtctgggggagaagtggccagacccacaaaacagaccttggacgaag
aaactaatcacaattgaggtggtcttgacttcgctggagatactaaagaatatagcggtt
gaaggtggcgcctcctccctgcagtcagtagaactgcaggagtcactgggggagatgatg
gatctatgctga
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