Oryzias latipes (Japanese medaka): 101158942
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Entry
101158942 CDS
T02443
Symbol
rxylt1
Name
(RefSeq) UDP-D-xylose:ribitol-5-phosphate beta1,4-xylosyltransferase isoform X2
KO
K21052
alpha-dystroglycan beta1,4-xylosyltransferase [EC:
2.4.2.61
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola00515
Mannose type O-glycan biosynthesis
ola01100
Metabolic pathways
Module
ola_M00872
O-glycan biosynthesis, mannose type (core M3)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
101158942 (rxylt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ola01003
]
101158942 (rxylt1)
Enzymes [BR:
ola01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.61 alpha-dystroglycan beta1,4-xylosyltransferase
101158942 (rxylt1)
Glycosyltransferases [BR:
ola01003
]
Glycan extension
O-Glycan
101158942 (rxylt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RXYLT1_C
RXYLT1_N
Exostosin_GT47
Motif
Other DBs
NCBI-GeneID:
101158942
NCBI-ProteinID:
XP_004069908
UniProt:
H2MNE6
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Position
6:complement(30468735..30472945)
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AA seq
439 aa
AA seq
DB search
MKIPKRKLFLLIIFAYVAFSLYAAYNVFFSNKVISRVHRVVKNSGAPAGGVRGGAAPFVA
DEWNPWEEEEVEYNSALNRKREAFKQHMSRIEKKKPQKYKVQIWGKAAIGLYLWEHILEG
SLNPTDKVAQWREGQLQSGKVELSFYTGPAVVQGHVPLDMNSLVLVLNGREEQKVLYSTR
WLKHVQALVQSRTVSHVAVVLLGNEQCDNDWIAPHLKRNGGFVDLLFLVYDSPWVNDKDV
FQWPLGVATYREFPVIRPNSQLITASRPYLCNFLGTVYKNSSRETMMHELKQSGLEKECF
IAARDKWLPQETADGLRRYQTALAQSELTLCPVGINTECYRIYEACSLGSVPVVEDVLTP
GKCAAGPSSPLRLLKAAGAPFIFISAWKELPAILEREKMMSQEQRVDRRRRLLEWYSSFR
RQMKERFTEALEENFFRSG
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataccgaaaagaaagctgtttcttttgattattttcgcatatgtggccttctcg
ctttacgcagcatataatgtctttttcagcaacaaagtgatctcccgcgttcaccgggtg
gtgaaaaacagcggcgcgcccgccggcggagtccgcggtggcgccgcgccgtttgtggcg
gatgagtggaatccgtgggaggaggaggaggtggagtacaactcggctctgaacaggaaa
agagaggccttcaagcagcacatgagcagaatcgagaagaagaaaccccaaaaatacaag
gtccagatctggggcaaagcggcaatagggctttacctttgggaacacatcttagaagga
tcccttaaccccaccgacaaagtagcacaatggagagaggggcagctgcagtctggaaag
gtcgagttgagtttctacacaggtccagctgtggtccagggtcacgtccctctagacatg
aacagcctggttctggttctgaatgggcgcgaggagcagaaggttttgtactccacgcgc
tggctgaagcacgtccaagctctggtccagtcccgcacggtgtcccacgtggctgtggtt
ctgctgggcaacgagcaatgcgacaacgactggatcgccccacatttgaagaggaacggc
ggcttcgtggacctgctgttcctggtgtacgacagcccgtgggtcaacgacaaggacgtc
ttccagtggcctctcggcgttgccacgtacagggagttccccgtcatccgacccaactcc
cagctgatcacagccagccgaccgtatctctgtaacttcttaggcaccgtttacaagaac
tcgtccagggaaacgatgatgcacgagctgaaacagtcgggcttagaaaaggaatgtttc
atcgcagccagggataagtggctccctcaggaaacggcggacggtctgaggcgctatcag
acggcgttggcccagagcgagctcaccctctgcccggtgggcatcaacaccgagtgctac
cgcatttatgaggcctgctccctcggctcggttcccgtagtggaggacgtcctgacgcct
gggaagtgcgccgccgggcccagctccccgctccgcctcctcaaagcggcgggagcgccc
ttcattttcatcagcgcctggaaggagctgcccgccatcctggagagggagaagatgatg
agtcaggagcagagggtggacaggaggcggaggctgctggagtggtactccagtttccgg
cggcagatgaaggaaagattcactgaggccctggaggagaatttcttcagaagtggatga
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