Oryzias latipes (Japanese medaka): 101158961 Help Entry 101158961         CDS       T02443                                  Symbol c12h5orf42 Name (RefSeq) protein JBTS17 isoform X1   KO K22859   protein JBTS17 Organism ola  Oryzias latipes (Japanese medaka) Brite KEGG Orthology (KO) [BR:ola00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:ola03037]     101158961 (c12h5orf42) Cilium and associated proteins [BR:ola03037]  Primary cilia and associated proteins   Ciliogenesis and planar polarity effectors (CPLANE) complex    101158961 (c12h5orf42) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Joubert Motif Other DBs NCBI-GeneID:  101158961 NCBI-ProteinID:  XP_020563324 LinkDB All DBs Position 12:complement(13459070..13477546) Genome browser AA seq 3148 aa AA seqDB search MELKLEVLLSSSIKRKKPWPRFCWLGQEKESVFVLDDRRISEINMVSGRTKKKTPKLHPL LNNVVTMASSRNGLWLCGLLMSGELFLWNRDKDLLKTATAVPEVVQMITSSQGTSTKLSL QVSCDGMRVLLSATSGKVFLWECMDSRVLAGLRDGPVEGHWVLIQAPVDTILPSSSDKEA SQTTIFVKTEVVGDICLSAFVFTSGENLITTILKIQWKEGQSVGFMRYSVHWVTKKYPLP RLTPPCQPVKSRGALVPVFSPDGQLLAIVLNQRKPQATQVLFVSTQNFISISSSLGGCGC KKVDIPSKYIRSYWVGSVSWSPGGLFLGCMLKRGSLLVLLRLGGLLSLTSSGCSVDFGPA HFLPLHPLVTYRPPMSARKGEASLSSSSMSVRDILRQRYSVTWHPRLFYLIVSDGYMATV MRLPDRPSPALILKTLLKDIRKDLEATSCKLDRSKGYVKAWLDSVCYLNLDSSSEELKAT LPDRPTMTDSIISAAVTNGSKLPLFLQNRPGSGGTAELLESVQALFDEESDLDGIPAGSH VRDRGCLEFASMFDTLHALKTHSSEKILSGQVYDQDGEDIKKNSLRRELREIHSRLLTVW AFGLSLGDAVEHRALLLKHLLCCVVQFAALLHLMPDPTCRSGESNTLAFTRLLHLIKALL SFLPWDSSPSEGPRCLRLVVEFSKWIVRLLLNPHPDSHLTGTCQVSSQSLSRIIFLIQMI SDSLDTSYTSEQKAVWSSEEESPSQPQVWLSDVYHVHFLQEGKWPQLVKPRPSIRLLGVW QLLYDVIQKYAEELNTIQSCNGLEEEKQRLALIMSQVQTSLQATGEKLGDGPALLNCQGE HLFLSGLYQKSAHAWRVQISQEINKSSYRSVFQETRLCLALLYSLLSQYQLREAQEMGDH MAQLILLRSGLQKTRGTTGSLPCRWIPTDLHSDAASAVVQSLGRFMASYFTNQSLFILPA HNVAVLPPLHLPHGPDVGRLVLLCQEEVARAVRQQHLSEVWTVDYAQDLLLLGGLLPEAV WMAYHLGDWKTAVSLSLAYTCYGSEKFKFSRLRRKDFQLPKALTPESIFQAELECLLKSD SQEHADKGNEKSFTEPLEGEDWDLLQSSIQEILKASVMAGVDIISTFLSSLLDAAKDMCS SLPALVPAGLYLPSPPLYCPQPSPNTQDPWGTAGQLPEVACRQKVSGVLQRLLLLLRSAC CCHPAAQWYVSRLGRARHILHKIKKKYAYPSAAVEEKSFPEELMKLIAHGGYFKRRAKKD PQLDSDTIHTIDCFRELCALCWMLHVRDQLSIHCRRFQLSRRHDGDEQSDLDSLSVDALR WARRLLPFSHFLNAEEILQDIVLSLVSDLPPLSMVADTLVETFPEEEESVSVPLREKYNS LLQRLRQCTVLDGVEEEANVPMTSLIQGKLRQRRKHLKRLQRHLTPPVLHLWEKEEDTES KCATGTPRQPSLGTNQGTFSDCEFQPACSDADTAGKTSDTNLSKGHSRSRSKKAKKKTEQ IKTDVKIGSGQDQGLREARKKEQLLQPTVGSWEFELEDDEYLHFLELFLSYVLERGSCLG VDSGSELPLLKSFCSELREKELHSLSFDILTTIHRRQKERKHSGSDAPLFRAGACYRPLS ESITPELQASSLWTEAPGSRDCLSVSSHFDQRSPQQRGLFGLWKQNSASFRRGDGSVLSS EASPAQNAFTADQLPENLPFDSSASVQTVSDLQQGLDPKLEARFPKLGRLLEWMVRWADR GVPFGLRDKKKKEQGRGAGDGVMIRVRASAPAVLTSLSLLELNAVLGTDRYASHIQVPEV QLTVSPVLQPGEERKLERESSVDTGYPGSAHSAPDQDFHQESISDGDPHTDEPEEHPTFQ ANPPPADQDAASSPHLTPDDDLNLTPEKENEGGDSECLGLPSSGPREDDTANSFSPETRL KPAEIDLSGKAEEVPCSSISSGHPEAQPNNQPQTLVQARPPDSNNLQRSDPVIDPPKIPP QTPTAEEPTVDSATLNLTSTPSPMRQLLGQDLFRLVQHINYLSLREVIGASFSNLLAQQP SSVAQPDMTCLLPDISSSATRFIPDQDALPNQSTVSAAVQTPVPKPGCRDLKNNDAGCQF AALTTTTSSAANQHQSNIDPQSNVCISGAEYQEMQPLSVQAESPDVQQMENRKRIPSSQG LLATTNTRRAVQSTPVPLSSHGGAQNDSAPPMLGLRLLKFSSPLLSQHTSSQNPPAPQPH AYPTANQEIPRSFQAKTKLDFNKGREDRNTFSSPITRPYKSTSRTFHPQSHSSPQLPPAF PAHTPSPFQGLRLLQLQPPPHHNITFPKLPLPSFSRPSALIPVPVTETPPIKLLQINRGP KVMVPRPVPSTHTTRLISKEELQNLGVGQQELEKTALQLLRVQKSPEKPITSSSCAPNKR HKRREEKAKGGKSEVTFRPNESIIPTQETPALPTSEEPAVVEKIRSDQDIPGDYFQPTVD SLTGQKLLGKIFSTSAELQAMASTSKRPPECYDVSTNTDSDCPPQLVDKAISVQASVMTG SPKSTSSANFQIFYEDPVRDGEQQPWQPETNTSPPGRQFLSVLDFEGEDGSPRPAPEIRD VPSIRPSSPTSSQLHVLATSVLRNDFSAVQIPDNCVPLTTPPEMPEESPSESSCGSRSVL ERVTSQNMTENLPESEICRAIRNQSGVRQNASPSLLSEGFSSRLSVLDAQLAALQNIADH LETDLVKSRMVVNSLEKLSSPSVKPTKATKKTVRLSLPLQAWTQRPDPAFSAEINASELD KNPTQHDDKDLLLSDEAGASSFHSPPDNFTDADEISHEWTDADPGQSELFDTVELLDELL KEGYLFPTDLDLFESQTVQHNSRQDLQQSGWMSEGQAFSREDRNELRIWMRRKHRERLAA YQKHRARLREQEHKPYTASPSRTRAASRKTRENEEKLTLLEQYDQRMKEAWSLAGEFNLP PGTQASSSRTEGSQVLSKKWSTAAPLSRPHSVSVSGKRGKARLHPQTHSVERPPSEDLHR RLGLHRPVTLLPGDRLSQVTRRGMLSKTLPKSDAASQNETRDDGHQGEPRLNQTYSRGGA IYKRIHRELPKVEGRRELDSSGPHRPQRLQRSDLVLTELVDEEENDPRGVSGIDWLDNLS ESADSCLSKIDWAAIERMAAAEESDVDS NT seq 9447 nt NT seq  +upstreamnt  +downstreamnt atggagctgaagctggaggttcttctgtcatcaagcatcaaacgaaagaaaccatggcca cgattctgctggctcgggcaggaaaaggagtctgtgtttgtgttagatgacaggcggatc agtgagatcaacatggtgtccggtcgaaccaagaagaagacaccaaaacttcatccattg ctcaacaatgtggtgacaatggcttcctctcgtaacgggttgtggctctgtggacttctc atgtcaggagaactgtttctgtggaacagagataaggatttgttgaagactgccaccgcc gtccctgaagtagttcagatgatcacttcatctcaaggcacatctacaaagctctctctc caagtttcatgtgatgggatgcgtgtcctcttgtcagccactagtggcaaagtattcctg tgggagtgcatggattccagggttttggcaggcctgcgggacggccccgttgaaggacac tgggtgctcatacaggctcctgtagacaccatcttgccttcttcaagcgacaaagaagca tctcaaaccaccatctttgtcaaaactgaggtagtaggtgacatttgtttatcagcgttt gttttcacatctggagagaacctcatcactactatacttaaaattcagtggaaagaaggc caatctgtgggttttatgcgttatagtgttcactgggtcaccaagaagtaccctttgccc cgtctaacccctccatgtcagccagtaaagtccagaggggctttggtgccagtcttctcg ccggatggccagctgttagccatcgtcctgaaccagagaaagcctcaggctacgcaggta ctttttgtgagcacacagaatttcatctcgatatcaagtagtcttgggggatgtgggtgc aagaaagtggacatcccatccaagtacataaggtcttactgggttggcagtgtcagctgg tcacctggaggactttttttaggctgcatgttgaaaagaggctctcttcttgtgttgctt cgtcttgggggacttctctctctgacaagctctggctgcagtgttgactttggtcctgca cactttttgcccttacatccacttgtcacttacaggccgccaatgtctgcacgtaaaggt gaagcatctttgtcgagctccagcatgtcggtgcgcgacatcttaaggcagcggtattct gtgacctggcatccacggcttttttatctcatcgtatctgatggttacatggccacagtt atgagattgccagacaggccttcccctgccctgatactaaaaactctcctgaaagacata cgcaaggatcttgaggcaactagctgcaaactagatcgatcaaagggttatgtgaaggcg tggctggactctgtttgctacttgaatctggacagcagctctgaagagctcaaagccaca ctcccagaccggccaaccatgacagactccatcatttcagctgcagtcactaatggatct aagctgccgctcttcttgcagaaccgaccaggatcgggtggaactgcggagcttcttgaa agcgtgcaggctctctttgacgaggagtctgatttagatggaattcctgctggttctcat gtccgggacagaggttgtttggagtttgcttcgatgtttgacactcttcatgccctaaaa acccacagtagtgaaaaaatcctctctgggcaagtttatgaccaagatggtgaggacatt aagaagaattcccttcgtcgtgagctcagagagatccatagcaggctgctaacagtgtgg gcttttggcttgtccctgggagatgcagtggagcatagagctcttctgttaaagcatttg ctttgctgtgtggttcagtttgcagctttactccacttgatgcccgatcccacttgtcgt tcgggagaaagtaataccttggctttcactcgcctcctgcacctcatcaaagctctttta tctttccttccttgggatagtagcccttcagagggaccacgctgcttgaggctagtggtg gagttcagtaaatggattgtacgtcttctgctgaaccctcaccccgactcccacctgact ggcacctgtcaggtttcttcccaaagtctgtccagaatcattttccttattcagatgatc tctgactctcttgacacgagttacacctcagagcaaaaagctgtctggtcttctgaggag gaatccccttctcagccccaggtgtggctctcagatgtatatcacgttcatttcctgcag gagggaaaatggcctcaacttgttaaaccaagaccttccatcagacttttaggagtgtgg cagcttttgtatgatgtcatccaaaagtatgcagaggaactgaacaccattcaaagctgt aacggtttagaggaggaaaagcaaaggctggctcttattatgtctcaggtccaaacatct ttgcaggcaacaggagaaaagctgggggacggccctgcactgctgaactgtcaaggtgaa catctcttcctgagtggcctttatcaaaagagtgctcatgcatggcgagtacaaatctct caggagatcaacaaaagctcttatcgcagcgtctttcaagagacgcggctttgtctggca ctcctttatagtctgctatcacagtaccaactgagagaagcgcaagagatgggagaccac atggcccagctcattctgctccgatctggactccagaagacgcgtgggacaacaggttct cttccttgccgatggataccaacagaccttcacagtgacgcagcctctgcggtggttcaa agcctcgggagattcatggcttcctacttcaccaatcagtcacttttcattctgcctgct cacaatgtggctgtgctccccccactccatcttcctcacggcccagacgttgggcgtttg gtgctgctctgccaggaggaagtggccagagctgtccgacagcaacatctgtcagaggtt tggacagtggactatgcccaggatctgctcctgcttggcgggctgctccctgaggctgtg tggatggcgtatcatctgggagactggaagactgccgtttctctgagcctggcttatacc tgctacgggtcagaaaaattcaaattcagtcggctcaggagaaaggatttccaactgcca aaagctttgacaccagaaagcatttttcaggctgagctggagtgtcttctgaaatcggac tctcaggaacacgcagataaaggcaatgagaagagctttacagagcctttggaaggagaa gactgggacttgttgcaaagttccattcaagagattttgaaagcctctgtcatggcagga gtcgatattatttccaccttcttgtcttccttgctggacgcagcaaaagacatgtgctcc tctctgcctgctttggtgcctgctgggctgtacctgccttccccacctctgtattgccca cagccctctcccaacacacaggacccatggggaacggcggggcaacttccggaggttgca tgtcgccagaaagtgtctggagttctccaaagactgttgttgcttctgagatctgcttgt tgttgccatcctgctgcccagtggtacgtcagtcggctgggccgtgccagacacatcctt cacaagatcaaaaagaagtatgcgtatccctctgctgcagtggaggaaaagagttttcca gaggagctgatgaagctgatagctcatggtggatacttcaaaagaagggccaaaaaagac ccccagttggacagtgacactattcatactattgactgttttagggagctgtgtgcttta tgctggatgcttcatgtcagggatcagctctccattcactgccgaaggtttcagctttcc agacggcatgatggagatgagcaatcggacttggattcgctgtctgtggacgctctccgc tgggcccgtcgtcttctgcccttctctcacttcctcaatgctgaggaaattcttcaggac atagtgctcagcctagtctcagacctacctcctctgtctatggtagcagacacacttgtg gaaaccttcccagaggaggaagagtctgtcagcgtacctctgagggagaagtacaactct ttgctgcagagactgaggcagtgcactgttcttgatggagttgaagaggaagcaaatgtg ccgatgacgagtttgattcaaggaaaactcagacaaagaaggaaacacctgaagcgattg caaagacacttgactccccccgtgctccatttgtgggagaaagaggaagacacggagagc aaatgcgccacaggcacaccaaggcagccgtcactgggtaccaatcagggaaccttcagt gactgcgagttccagccagcgtgcagtgatgctgacacagcaggcaaaacatctgataca aacttgtctaaaggacattccagatccagaagcaaaaaagcaaagaagaaaacagaacaa atcaagacggatgttaagattggtagtggtcaagatcagggtctcagagaagccaggaag aaggagcagctgctccaaccaactgttgggtcctgggagtttgagctggaggatgacgag tatcttcattttctggagctctttctaagttatgttttagagaggggtagctgtcttgga gtggactctggcagtgagctgcctttgctgaagagcttctgctctgagctgagggagaag gagttgcactctctgagttttgatatacttaccaccattcatcggcgtcaaaaagagagg aaacactcgggcagtgatgcaccactgttcagagctggggcttgctacaggcctttaagt gaaagtataactcctgagctgcaggcatcgtctttgtggactgaagctcctggatccagg gactgtctctctgtcagttctcattttgatcagagaagcccacaacagagaggtctgttt ggcctctggaaacaaaactctgcatcttttaggaggggggatggatcagttcttagttct gaagcgagccctgctcagaatgcttttacagcagatcagctcccagaaaatctcccattt gactcttcagcatctgtacagactgtctccgacttacagcagggcctagatcccaaactg gaggctcggtttccgaagctcggcaggctgctggagtggatggtgcgatgggccgacaga ggggtgccgtttgggctccgtgacaaaaagaagaaagaacaagggagaggagccggggac ggagtgatgattcgtgtcagggcttcagcacctgctgttctcacctccctgagtttgctg gagttgaacgcggtgctggggaccgaccgttacgcctcccacatccaagttccagaggtg cagctgactgtgtcccctgtgctgcagcctggggaggagaggaagcttgagagggagagc agtgttgatacaggctaccctggatcagcccacagtgctccagatcaggattttcatcaa gaaagcatcagtgatggcgatcctcatacagatgaaccagaggaacatccaacatttcag gcgaaccctccgcctgctgaccaggatgctgccagttcaccacatctcactcctgatgat gacttaaatcttactccagaaaaagaaaacgaaggcggtgacagtgaatgtttgggtttg ccatcgtccggtcccagagaagacgacactgcaaacagcttttctcctgaaactagatta aaaccggcagagattgacctgtcaggaaaggctgaagaagttccctgttcctccatttcc tctggtcatccagaagcacaacctaacaaccaacctcagactctggttcaggccagacct cctgattcaaacaatctgcagcgctcagatccagtgatcgatcctccaaaaatcccgcct cagacccccacagctgaggaacccacagtagattctgcgactttaaatctgacgtcaact ccgtcacccatgaggcagcttctgggtcaagacctattcagactggttcagcacatcaac tacttgagtctgcgggaggttattggagcttcattttctaacctacttgcccagcaaccg tcttctgtggcccagcctgacatgacctgcttactccctgatatatcatcatctgccacc agatttatccccgaccaggatgcattacctaatcaatctacagtctctgcagcagttcag acacctgtcccaaagccaggctgcagagacctcaagaataatgatgctggatgtcagttt gcagcactgacgaccacaacatcctccgcagccaaccagcatcaatccaacatagatcca cagtccaatgtctgcatcagtggtgctgaatatcaggaaatgcagccactttctgtgcaa gcagagtccccagatgttcagcagatggaaaacaggaaacgaatcccctcttcacaagga ctcctggccaccaccaacaccaggcgtgcagttcagagcacgcctgtacctctaagctct catggtggtgcacagaatgattctgctcctccaatgttaggtctgaggttgctaaaattc tccagccctctgctgtcccagcacacctcttcacaaaatccaccggcacctcaaccacac gcatatcccactgcaaaccaggaaatccccagatcttttcaggcaaagactaaacttgac ttcaacaaagggagggaagacagaaatacattttcatctccaataactcgcccatacaaa tcaacttccaggacttttcatccccaaagtcacagttccccgcagctccctcctgctttt cctgctcatacaccttcaccgtttcagggacttcgcttgctgcagctgcagccacctcca catcacaacatcaccttccctaaattaccactcccatcattctctagaccttctgcactc attccagttccagtgacggaaacgcctccgatcaagcttctgcagatcaaccgtgggccc aaagtgatggtaccccggccagttccctcaacccatacgacccgtctgatctctaaggaa gagttgcagaatttaggggttgggcaacaggaactggaaaaaactgctcttcagttgctc agagttcaaaaatctcctgaaaagcccatcacctcgtccagctgtgcccccaacaaaagg cataaaagaagagaggaaaaagcaaaaggggggaaatctgaggtcacgtttagaccaaat gagtctatcatccctactcaagagactccagcgttgcctacaagtgaggaacctgcagtt gttgagaaaatccgctctgatcaggacatcccaggtgattattttcaacctacagttgac tccctaaccggtcagaaactgttgggtaagatcttttccacttcagctgagctccaagcc atggcttccacaagtaagcgtcccccggagtgttatgacgtgtccaccaacacagactcg gattgtccgccacaacttgtggataaagccatatctgtccaagcctctgtgatgactggc agcccaaaatcaacaagttcagcaaatttccaaattttttatgaagatcctgttcgagac ggagagcagcaaccatggcaaccagagacgaataccagtccacctggccgccaatttcta agtgttttagatttcgaaggtgaagatggatcaccacgtcctgctccagaaatacgagac gttccttccattcgaccttcctcgcccacatcttctcagcttcatgttcttgcaacctcc gtcctcaggaatgacttttctgctgtccaaattccagataactgtgtgccgctcaccact cccccagaaatgcccgaggagtctccctcagaaagcagctgtgggtccagaagcgtttta gaaagggttacatcccagaacatgacagagaacttgcctgaatctgagatctgccgagcc atcaggaaccaaagtggcgtccgtcagaacgcctcgccttcactcctttctgaggggttc tcctcacgcctctcagtactggacgcccagcttgctgcgctgcagaacatcgcggatcat cttgagacggacctcgtaaaatccagaatggtggtgaactccctggaaaagctttcctca ccgagtgtgaagcccaccaaggcaacaaagaaaactgtcagattgtctcttcctctgcaa gcatggacacagagacctgatccagccttttcagctgaaataaatgcatcagagcttgat aaaaaccctacacagcatgacgataaagacctgcttctcagtgatgaagctggagcctcc tcctttcactcaccaccagataactttacagatgcagacgagatatctcatgagtggacg gatgctgacccgggccaatccgagttatttgatacggtggaattgttagacgagctgcta aaggaaggatatttatttccaaccgacctggatttgttcgaatcccagactgtgcagcac aacagcaggcaagacctgcagcagagtggctggatgtcagagggacaggctttttcccgg gaggacaggaatgaactgaggatatggatgagaaggaaacacagggaacgactggctgca tatcagaaacacagagcacgtctgagggagcaggaacacaaaccttacactgcctctcca tccaggactcgagcagcctcacggaaaaccagagaaaatgaagaaaagctcactcttctg gagcagtacgaccagcgcatgaaggaggcttggtctttggccggtgaattcaatcttcct ccgggaacccaagcgagttcttcacgcactgaaggttctcaggttctgtccaaaaagtgg tcaaccgctgctccgctcagcaggcctcacagtgtgtccgtcagtggcaaaaggggaaaa gctcggctccacccgcagacacactctgtggaaagaccgccttcagaggatcttcacaga cgactgggacttcatcggcctgtgactcttttaccaggggaccgactgtctcaggtgacg agacgcggcatgctcagtaagacgctccctaaaagtgatgcagccagccagaatgaaacc agagacgatggacaccagggagaacctcgactgaaccagacatattcaagagggggtgct atatacaaaaggattcacagggagctgcctaaagtggaagggagaagagaattggacagt tcaggacctcatagaccgcagaggctgcagcggtctgaccttgttctcacagagcttgtg gatgaggaggaaaatgatccccgtggagtttcagggatagactggctggacaatctgtct gagagtgcagacagctgcctcagtaaaatagactgggcagctatagagagaatggctgct gcagaagagtcagatgtggactcttaa

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