KEGG   Oryzias latipes (Japanese medaka): 101161601
Entry
101161601         CDS       T02443                                 
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3
  KO
K03174  TNF receptor-associated factor 3
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola04620  Toll-like receptor signaling pathway
ola04621  NOD-like receptor signaling pathway
ola04622  RIG-I-like receptor signaling pathway
ola05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ola00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    101161601 (traf3)
   04621 NOD-like receptor signaling pathway
    101161601 (traf3)
   04622 RIG-I-like receptor signaling pathway
    101161601 (traf3)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    101161601 (traf3)
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 zf-TRAF TRAF3_RING ATG16 zf-C3HC4 Crescentin Sina_ZnF Fzo_mitofusin zf-C3HC4_2 CCDC113_CCDC96_CC ATG17_like Synaptobrevin CHASE3 GAS ACBP4_C KxDL OVT1 FapA DUF1664 Snapin_Pallidin Fez1 Prefoldin_2
Other DBs
NCBI-GeneID: 101161601
NCBI-ProteinID: XP_004084442
LinkDB
Position
22:2209580..2217486
AA seq 592 aa
MSAGRSADGREVQIPLQQAAPSLALPLSAAVPAPPHRSSNPRPPCEPPTQQGAPAGFLPV
RGGFRDHFVEAPEAKYCCEACRLVLCQPRQTECGHRFCYSCINDILSCPNPVCPADMEPL
FKDKIFRDVCCHREIMALKVYCRSEANGCQEQMSLQQIPDHVNVCPFFEVPCPLGKCKER
MMRKEIPEHLAWKCKYRESTCEFCKNKMPLTELQKHKETVCPAFPVSCPNHCTSSSLPRS
ELSSHQHDCPKAQVSCQFHRYGCSFKGLNLDMRQHESSFAAEHLKMMATRTGLLETKVEE
VKGELMERYKVLPALSTRLSDLESQTDDLREKNRQMEQKLAAMQKLMSSHTEKLLELELE
LRSLRQLRDEMESLRGTLDTVRTRLSALEQGGRGGSGSAHTLASLETQLNRHDDMLSVHE
IRLADMDLRFQVLETASYNGTLIWKIRDYKRRKQDAVAGKTLSLYSQPFYTGYFGYKMCA
RVYLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFKQKVTLMLMDQGPSRKHLGDAFKPDP
SSSSFRRPVAEMNIASGCPLFVSQSVLESGTYIKDDTIFIKVTVDTSDLPEP
NT seq 1779 nt   +upstreamnt  +downstreamnt
atgtcagcggggaggagtgctgatgggagggaggtgcagattcccctccagcaggcggcg
ccgtctctcgccctgcccctctctgctgccgtccccgccccccctcaccgctcctccaat
ccacggccgccgtgcgagccgcccactcagcaaggcgctcctgcgggcttcctgccggtg
cgtggagggttcagggatcacttcgtagaagctccggaagccaaatactgctgcgaggcc
tgcaggctggtcctgtgtcagccccggcagactgaatgtggacaccgcttctgttacagc
tgcattaatgacattctcagctgtccgaacccggtgtgtccggcagacatggagcctctg
tttaaagacaagatctttcgagacgtttgctgccatcgggagatcatggctctgaaggtc
tactgccgcagcgaggccaacggctgccaggagcagatgagtctgcagcagatcccagac
cacgtgaacgtgtgtccgttctttgaggttccctgtccgctgggtaaatgtaaggagaga
atgatgaggaaggagatcccagagcacttggcctggaagtgcaaatacagagagagcacc
tgcgaattttgcaagaacaagatgcctctgactgagctgcagaaacataaagagacggtg
tgtccagcatttccggtgtcctgtccgaaccactgcacctcctcctcgttgccccggagt
gagctctccagccaccagcacgactgccccaaagcccaggtcagctgccaatttcaccga
tacggctgctccttcaagggtctgaacctggacatgagacagcacgagtcgagctttgcg
gccgagcacctgaaaatgatggccaccagaacggggcttctagagaccaaggtggaggag
gttaaaggcgagctaatggagaggtacaaggttctcccggctctcagcacccgcctgtcg
gacctggagagccagacggatgacctccgagagaaaaaccggcaaatggagcagaagctg
gctgccatgcagaaactgatgagttctcatacggagaagctgctggagctggagttggag
ctgcgatctctgcgccagctccgagatgagatggagagcctgcgaggaacgctggacacc
gttcgaacccggctcagcgctctggagcagggaggacgcggcggcagcgggtctgctcac
actctggcctccctggagacgcagctaaatcgccacgacgacatgctgagcgtccatgag
atccggttggcggatatggacctgcggttccaggtgctggagacggcgagctacaacggg
actctgatctggaagatccgcgactacaagaggcggaaacaggacgcggtggcggggaag
acgctgtcgctgtactcgcagcccttctacaccggctactttggctacaaaatgtgcgcc
agggtttacctgaacggggacgggatgggcaaggggactcacctgtcgctgttcttcgta
gtgatgaggggagagtatgatgccctgctgccctggcccttcaagcagaaggtgacgctg
atgctgatggaccagggtccctccaggaaacaccttggtgacgcctttaagccagacccc
agcagcagcagcttcaggcggcccgtggcggagatgaacatcgcctccggctgcccgctc
ttcgtatcccaaagtgtcctggagtctggcacctacatcaaagacgacaccatattcata
aaggtgaccgtggacacgtctgacctgcccgagccgtga

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