Oryzias latipes (Japanese medaka): 101161601
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Entry
101161601 CDS
T02443
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3
KO
K03174
TNF receptor-associated factor 3
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04620
Toll-like receptor signaling pathway
ola04621
NOD-like receptor signaling pathway
ola04622
RIG-I-like receptor signaling pathway
ola05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
101161601 (traf3)
04621 NOD-like receptor signaling pathway
101161601 (traf3)
04622 RIG-I-like receptor signaling pathway
101161601 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
101161601 (traf3)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
ATG16
zf-C3HC4
Crescentin
Sina_ZnF
Fzo_mitofusin
zf-C3HC4_2
CCDC113_CCDC96_CC
ATG17_like
Synaptobrevin
CHASE3
GAS
ACBP4_C
KxDL
OVT1
FapA
DUF1664
Snapin_Pallidin
Fez1
Prefoldin_2
Motif
Other DBs
NCBI-GeneID:
101161601
NCBI-ProteinID:
XP_004084442
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All DBs
Position
22:2209580..2217486
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AA seq
592 aa
AA seq
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MSAGRSADGREVQIPLQQAAPSLALPLSAAVPAPPHRSSNPRPPCEPPTQQGAPAGFLPV
RGGFRDHFVEAPEAKYCCEACRLVLCQPRQTECGHRFCYSCINDILSCPNPVCPADMEPL
FKDKIFRDVCCHREIMALKVYCRSEANGCQEQMSLQQIPDHVNVCPFFEVPCPLGKCKER
MMRKEIPEHLAWKCKYRESTCEFCKNKMPLTELQKHKETVCPAFPVSCPNHCTSSSLPRS
ELSSHQHDCPKAQVSCQFHRYGCSFKGLNLDMRQHESSFAAEHLKMMATRTGLLETKVEE
VKGELMERYKVLPALSTRLSDLESQTDDLREKNRQMEQKLAAMQKLMSSHTEKLLELELE
LRSLRQLRDEMESLRGTLDTVRTRLSALEQGGRGGSGSAHTLASLETQLNRHDDMLSVHE
IRLADMDLRFQVLETASYNGTLIWKIRDYKRRKQDAVAGKTLSLYSQPFYTGYFGYKMCA
RVYLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFKQKVTLMLMDQGPSRKHLGDAFKPDP
SSSSFRRPVAEMNIASGCPLFVSQSVLESGTYIKDDTIFIKVTVDTSDLPEP
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcggggaggagtgctgatgggagggaggtgcagattcccctccagcaggcggcg
ccgtctctcgccctgcccctctctgctgccgtccccgccccccctcaccgctcctccaat
ccacggccgccgtgcgagccgcccactcagcaaggcgctcctgcgggcttcctgccggtg
cgtggagggttcagggatcacttcgtagaagctccggaagccaaatactgctgcgaggcc
tgcaggctggtcctgtgtcagccccggcagactgaatgtggacaccgcttctgttacagc
tgcattaatgacattctcagctgtccgaacccggtgtgtccggcagacatggagcctctg
tttaaagacaagatctttcgagacgtttgctgccatcgggagatcatggctctgaaggtc
tactgccgcagcgaggccaacggctgccaggagcagatgagtctgcagcagatcccagac
cacgtgaacgtgtgtccgttctttgaggttccctgtccgctgggtaaatgtaaggagaga
atgatgaggaaggagatcccagagcacttggcctggaagtgcaaatacagagagagcacc
tgcgaattttgcaagaacaagatgcctctgactgagctgcagaaacataaagagacggtg
tgtccagcatttccggtgtcctgtccgaaccactgcacctcctcctcgttgccccggagt
gagctctccagccaccagcacgactgccccaaagcccaggtcagctgccaatttcaccga
tacggctgctccttcaagggtctgaacctggacatgagacagcacgagtcgagctttgcg
gccgagcacctgaaaatgatggccaccagaacggggcttctagagaccaaggtggaggag
gttaaaggcgagctaatggagaggtacaaggttctcccggctctcagcacccgcctgtcg
gacctggagagccagacggatgacctccgagagaaaaaccggcaaatggagcagaagctg
gctgccatgcagaaactgatgagttctcatacggagaagctgctggagctggagttggag
ctgcgatctctgcgccagctccgagatgagatggagagcctgcgaggaacgctggacacc
gttcgaacccggctcagcgctctggagcagggaggacgcggcggcagcgggtctgctcac
actctggcctccctggagacgcagctaaatcgccacgacgacatgctgagcgtccatgag
atccggttggcggatatggacctgcggttccaggtgctggagacggcgagctacaacggg
actctgatctggaagatccgcgactacaagaggcggaaacaggacgcggtggcggggaag
acgctgtcgctgtactcgcagcccttctacaccggctactttggctacaaaatgtgcgcc
agggtttacctgaacggggacgggatgggcaaggggactcacctgtcgctgttcttcgta
gtgatgaggggagagtatgatgccctgctgccctggcccttcaagcagaaggtgacgctg
atgctgatggaccagggtccctccaggaaacaccttggtgacgcctttaagccagacccc
agcagcagcagcttcaggcggcccgtggcggagatgaacatcgcctccggctgcccgctc
ttcgtatcccaaagtgtcctggagtctggcacctacatcaaagacgacaccatattcata
aaggtgaccgtggacacgtctgacctgcccgagccgtga
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