KEGG   Oryzias latipes (Japanese medaka): 101161646
Entry
101161646         CDS       T02443                                 
Name
(RefSeq) lysine-specific demethylase 2B isoform X2
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ola00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    101161646
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ola03000]
    101161646
   04121 Ubiquitin system [BR:ola04121]
    101161646
   03036 Chromosome and associated proteins [BR:ola03036]
    101161646
Enzymes [BR:ola01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     101161646
Transcription factors [BR:ola03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    101161646
Ubiquitin system [BR:ola04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     101161646
Chromosome and associated proteins [BR:ola03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    101161646
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     101161646
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like F-box PHD LRR_4
Other DBs
NCBI-GeneID: 101161646
NCBI-ProteinID: XP_011477695
LinkDB
Position
9:complement(18785058..18795318)
AA seq 766 aa
MALSMSGEDEEYESESEQQRAANRPKPKMGTSTVKLPSNRSTSGARRRRTRCRKCEACLR
TECGECHFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCVVCKEAGKEDTLQDDEDKF
NFMLMECSICNEIVHPNCLKVSDASGVVNDELPNCWECPKCNHAGKSGKVLKQKRGPGFK
YASNLPGSLLREQKPGKEEGDVSSVSKRKPEREETPRHRPEDSIHRQPPLLSPSNLPHSR
PEDKLRKKRKLFDDDEEEDLSVKRKEIKTEEDDEDTYEEDDDEVREPQFRSSIGRKGRFG
DTEDEWDYKDTKTDHLNPSIKTPLGDSDQSHCSSPQAGPSSEGGSETQEKGHRPKARRKR
RLPNRDLSRELSKELNQEIQKTEDSLANENRQPLKVEPEMENEEPKRLFRNGNELSDQRS
HLKTKEMNGTPWELRHFYPSRITPLGFNRSTPTTRPVPPRSPPKCVQMERHVVRPPPISP
PPDRLPLKDGKAHVMQREVWMKIFSYLTHQELCVCMRVCKTWNRWCCDKRLWTKIDLNRC
TSITPLMLSGIVRRQPVSLDLSWTNISKKQLSWLINRLPGLRVLKLSGCSWAAVSALCTS
SCPLLRTLDIQWVEGLKDAQMRDLLSPPTDNRPGQLDNCCKLRNVEDLRLAGLDITDASL
RLISRQMPLLSRLDLSYCNHINDQSVNLLTAAGTTTRDSLTEINLSVCNRVTDHSLNFFK
RCGSICQIDLRFCKQVTTTACERFIAEMSVSVPFRLKEEKLLQKTS
NT seq 2301 nt   +upstreamnt  +downstreamnt
atggccttgtcaatgagtggagaggatgaggaatacgagtctgagtctgagcagcagcgg
gcagctaaccggcccaaacccaagatggggacgtcaaccgttaagctgccgtccaaccgc
agcacgtctggagccagacggaggaggacgcgctgccgtaagtgtgaggcgtgtctgcgg
accgaatgtggagagtgtcacttttgtaaggacatgaagaagtttggtggaccggggcgc
atgaagcagtcctgcatcatgaggcagtgcattgcacccgtcttgccccacactgcagtg
tgtgttgtttgcaaagaggcagggaaggaggacacacttcaagacgatgaggacaaattc
aactttatgttaatggagtgctccatctgcaacgagattgttcatcccaactgcctcaag
gtgagtgatgcatcaggagtggtgaacgatgaacttcctaactgctgggaatgtccgaag
tgcaaccatgctgggaaaagcggaaaagtattgaagcaaaaaaggggtccggggttcaaa
tacgcctccaacctccccggctccttgctgcgggaacagaaacctggaaaagaggaagga
gacgtttcgtccgtgtccaaaaggaagccggagcgggaggaaacgccaagacacagacca
gaggattcgatccaccggcagccacctctgctctcccccagcaacctgccacactccagg
cctgaggacaaactgaggaagaagaggaagttgtttgatgatgatgaagaggaggatctc
agtgtgaagaggaaggaaatcaagaccgaagaggatgatgaagacacatatgaggaagac
gatgacgaagtaagggagcctcaattccggagcagcataggtaggaaagggcggttcgga
gatactgaagacgaatgggattacaaggacacaaagactgaccacttgaatccctccatc
aaaacaccgcttggcgacagcgaccagtcacactgcagctctccacaggccggtcccagc
agcgagggcggcagcgagacgcaggaaaagggccaccgtcccaaagcgcggcgtaagcgc
cgcttgcctaacagagatctgagccgagaactgagcaaagaactgaaccaagaaatccag
aagacagaggattctttggcaaacgagaaccgacagcctctcaaagtggagccagaaatg
gaaaacgaggagcccaagcggctgtttcgcaacgggaacgagctctctgatcaacggtcc
cacctcaagaccaaagagatgaacgggaccccctgggaactgcggcacttttacccaagt
cggatcacgccgctcggttttaatcgtagtaccccaacaacacggccagtcccgccacgc
tctccgcccaagtgtgtccaaatggaacggcacgtcgttcggccccctccgataagcccg
cctcctgataggctgcccctgaaagacgggaaagcgcatgtcatgcaacgggaggtgtgg
atgaaaatattcagctacctcacacaccaggagctgtgtgtctgcatgagagtgtgcaag
acgtggaacagatggtgttgtgataagcgactctggacaaagattgatctgaaccgctgt
acgtcaatcaccccccttatgctcagtggaatcgtccgcagacagccggtttccctggat
ctcagttggaccaacatttctaaaaagcagctcagctggcttattaacaggttaccaggt
ctgcgagtattgaagctgtcaggctgttcttgggcggctgtttctgcactctgcacctcc
agctgccctctgctgcgcaccctcgatatacagtgggtggaaggcctcaaagatgcccag
atgagggacctcctctcaccgcctacagataacagaccaggtcagttggacaattgttgc
aagttgaggaacgtggaggacctgcggctggcaggactggacatcaccgacgcgtccctg
cggctcataagtcggcagatgcctttgctgtccaggttggacctgagttactgcaaccat
attaatgaccagtctgttaacttacttacagcagcagggaccacaaccagagactccctc
acagaaatcaacctatcagtttgtaatcgagttacagatcattccttaaactttttcaag
cgctgtggaagcatctgccagatcgacctccgcttctgcaagcaggtgaccacgacggct
tgcgaaaggttcattgcagagatgtcagtgagcgtacctttcagactaaaagaagagaaa
ctcctacagaagaccagctag

DBGET integrated database retrieval system