Oryzias latipes (Japanese medaka): 101162508
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Entry
101162508 CDS
T02443
Symbol
xdh
Name
(RefSeq) xanthine dehydrogenase/oxidase
KO
K00106
xanthine dehydrogenase/oxidase [EC:
1.17.1.4
1.17.3.2
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola00230
Purine metabolism
ola00232
Caffeine metabolism
ola00983
Drug metabolism - other enzymes
ola01100
Metabolic pathways
ola01232
Nucleotide metabolism
ola04146
Peroxisome
Module
ola_M00546
Purine degradation, xanthine => urea
ola_M00958
Adenine ribonucleotide degradation, AMP => Urate
ola_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
101162508 (xdh)
09110 Biosynthesis of other secondary metabolites
00232 Caffeine metabolism
101162508 (xdh)
09111 Xenobiotics biodegradation and metabolism
00983 Drug metabolism - other enzymes
101162508 (xdh)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
101162508 (xdh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ola04147
]
101162508 (xdh)
Enzymes [BR:
ola01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
101162508 (xdh)
1.17.3 With oxygen as acceptor
1.17.3.2 xanthine oxidase
101162508 (xdh)
Exosome [BR:
ola04147
]
Exosomal proteins
Exosomal proteins of breast milk
101162508 (xdh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MoCoBD_2
MoCoBD_1
FAD_binding_5
Ald_Xan_dh_C
CO_deh_flav_C
Fer2_2
Fer2
Motif
Other DBs
NCBI-GeneID:
101162508
NCBI-ProteinID:
XP_011481039
UniProt:
H2L694
LinkDB
All DBs
Position
2:complement(10168168..10190392)
Genome browser
AA seq
1355 aa
AA seq
DB search
MIRNRDNSTMKGENVVDAGRNWSGSNELVFFVNGKKVVVENPDPEMTLLTYLRRKLGLTG
TKLGCAEGGCGACTVMLSRYQPHSGELLHLAVNACLAPLCSLHMQAVTTIEGIGSMAKKL
HPVQERIAKSHGSQCGFCTPGIVMSMYALLRNKPTPTMAEVEEAFHGNLCRCTGYRPILE
GYRTFTKEGGCCGDRGVNGGCCKANGSTALKSSEEDDEGTSLFNTADFTPYDPTQEVIFP
PALMILCKNEGSLPLCFRGERTTWLQPATLDQFLRLKWEHPEARVVVGNTEVGIEVKFKN
MVYPVILAPAFIQELNAVTHKEDGITFGAACTLSHMGEVLRQAVETLPPHQTQVFLSILE
QLRWFAGQQIRNVAAVGGNIMTASPISDLNPVFMAAGCKLTLMDKDGGRVVQMDDGFFTG
YRKTVVRPQEILLSVHIPYSKKTQFVCAFKQSPRREDDISIVTAGMSVTFTPGTDVVDDL
KLSFGGMAPTTVLAKKTASRLQGWKWGEELLQEACSSLAEEMNLDPSAPGGMVTYRRTLT
LSLFYKFYLRVLQKLHLRGVSAHGIDTKCLSATEIYNPTTPSSVQVYQAVPKGQSQDDVV
GRPMMHVSAIKQATGEAIYCDDVPLYENELYLALITSTKAHGRILTVDTSAAERLPGVVC
SLFADSVPGSKITGIKQDETVFADGQVTCVGQIIGAVVADSQPHAQRAAKAVKIEYEELQ
PVITIQEAITAQSFYEPIRTLQNGDVEVGFKQAEKILEGEMHIGGQEHFYLETHVTLAVP
KEDGEMELFVSTQSPNDTQSHVAKALGVPANRVVVRVKRLGGGFGGKESRSTVLSTVVAV
AANKLGRPIRCMLDRDEDMLITGGRHPFFGKYKVGFSNSGKVVALDVTYYSNAGNSMDLS
LSIMERALFHMENSYSIPNVRGRGFLCRTNLPSNTAFRGFGGPQGMMIAESWITDVAQSL
GLPAEEVRRLNLYMEGEKTPYNQILHGLTLDRCWNECLSQSRYEEKRAAAGLFNKQNRWT
KRGIAVVPTKFGISFTAAFLNQAGALVHIYTDGSVLLTHGGTEMGQGLHTKMVQVASRVL
GIASSKIHISETSTNTVPNTSPTAASASSDLNGAAVQAACETLLKRLEPYKTKNPKGPWE
DWVKAAYFDRVNLSANGFYKTPDLGYSFETNSGRVFNYFSYGVACSEVEIDCLTGAHENL
STTIVMDVGSSLNPAIDIGQVEGGFIQGLGLFTLEELHYSPAGVLLTRGPGSYKIPAFGD
IPTQLTVSLLRDAPNDKAIFASKAVGEPPLFLASSVFYAIKDAISAARAESGLKGPFKLD
SPASAERIRNACVDHFTKLCPPAEPGTYNPWSVQV
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atgatcagaaaccgagacaactccaccatgaaaggcgagaatgtggttgacgccggacgg
aactggtccggatccaacgagcttgtcttctttgtcaatggcaagaaggttgtggtggaa
aaccccgatccagagatgacacttctgacttatctaagaagaaaactgggtttgacaggg
acaaagctgggttgcgctgaaggtggctgtggtgcctgcaccgtcatgctgtccagatac
cagccgcactccggagagctgcttcaccttgccgtcaacgcctgtctcgccccgctctgc
tctctacacatgcaagcggtgaccacgattgaaggaatcggaagcatggctaaaaaacta
caccctgttcaggagcggattgcaaagtcccacggttcccagtgtgggttctgcacgcca
ggaattgttatgtccatgtacgctctgttaagaaacaagcccacccccactatggctgag
gtggaggaggctttccatggaaacctctgccgctgtaccggatacagacccattttggag
ggctacaggaccttcaccaaggagggtggttgctgtggagataggggggtgaatggaggc
tgctgtaaggccaacgggagcactgctttaaaaagctctgaggaggatgatgaaggcacg
tcactgttcaacacggcagacttcacaccttacgaccccacccaggaagtaatcttccct
cctgcactcatgatcctatgtaagaacgaggggtcactgcctctgtgtttccgaggcgaa
cgcacaacgtggctgcagcccgctaccctggaccagttcttgcgtctgaagtgggaacac
ccagaggcccgggtggtggtgggaaacaccgaagtagggatcgaggtgaagttcaagaac
atggtttacccggtcatcctggctccagctttcatccaagagctgaatgcagtgactcac
aaagaggacggtatcacctttggtgcagcgtgcaccctaagccacatgggagaagtgctg
aggcaagcggtggagactttaccccctcatcagactcaagttttcctttccattctggag
cagctgcgatggttcgctggacagcagatacgaaacgtagcagctgtgggtggaaacatc
atgacagccagccccatatcagacctgaaccccgtctttatggctgccggctgcaagctc
actctgatggacaaggatggcggtcgtgtggttcagatggacgatggcttcttcacaggt
tacaggaagacagttgtgcgaccgcaggagatccttctctccgtacacatcccttatagc
aagaaaactcagttcgtctgcgccttcaaacagtcccctcgccgtgaggatgatatcagc
atcgtcactgcaggcatgagcgtcaccttcactcctggcactgatgtggtggacgatcta
aagctaagctttggaggtatggcgccgaccacagtgttggccaagaagacagcaagccgt
ctgcaaggatggaaatggggggaggaacttctgcaagaagcctgttcctcattggctgaa
gagatgaaccttgacccctctgcaccaggtggcatggtgacataccggcgaacactgacc
ctgagtcttttctacaaattttatttgagagtgttgcagaagctccacctgcggggtgta
tctgcgcatgggattgacacaaagtgtttgagcgccacagagatctataatcccaccacg
ccatccagtgttcaagtctaccaggcagtcccaaaggggcagagccaggacgatgtggtg
ggacgtcctatgatgcatgtgtcggccatcaaacaggccaccggtgaagctatttactgt
gatgatgtgccgttgtatgagaacgagctctacctggcccttatcaccagcaccaaggct
catggtcggatactcaccgtggatacatcagcagcggagcgtttgcctggcgtggtttgt
tccctgtttgccgactctgtccctggaagcaaaatcacaggaatcaaacaggatgaaacc
gtgtttgctgatggacaggtaacatgtgtgggtcaaataatcggagcggtggtggccgac
agtcagcctcatgctcaaagagccgccaaggcggtgaaaattgaatatgaggagctgcag
cctgtcataaccatccaggaagccatcactgctcaatccttttatgagccaatccgaact
cttcagaacggagatgttgaggtggggtttaagcaggcggaaaagatccttgagggtgag
atgcacatcggaggtcaagagcatttttacttggagactcatgtcactttggccgttccc
aaagaagatggagagatggagcttttcgtttcaacgcagtctcccaatgacacacagtct
catgttgctaaggccctcggtgtcccagctaacagggtggtagtccgggtgaagaggttg
ggtggtggctttgggggtaaagaaagccgctccacagtgttgtcaactgttgttgcagtg
gcggcaaacaagctggggaggcctatcaggtgtatgctggacagagatgaggacatgctc
attaccggaggacgacatcccttctttgggaaatataaagttggtttttcaaacagtgga
aaagtggtagccctggatgtgacctattacagcaatgctggaaattccatggacctttct
ctatcaattatggagcgtgctctttttcatatggagaactcctacagtataccaaatgtg
cgtggccgtggcttcctgtgccgcaccaatctgccatccaacaccgctttcagaggattt
ggaggaccacaaggcatgatgattgctgaaagctggataactgatgtggctcagagcctg
ggcctcccagctgaggaggtgcgaaggctgaatttgtacatggagggtgagaaaacgcca
tacaaccagatcctgcatgggctgaccttagatcgttgctggaacgagtgtctgtcacaa
tccagatatgaagaaaaacgagccgcggctggcctcttcaacaaacagaaccgatggacc
aaacgaggcattgccgtagttcccaccaagtttggcatcagcttcactgccgctttcctc
aaccaggctggtgctctggttcacatctacactgatggctctgtactgttgactcatgga
ggaactgaaatgggccagggccttcacaccaagatggtccaggtagctagcagggttctg
ggtatcgcctcatccaagattcacatctcagagaccagcaccaacacagttcccaatact
agccccactgctgcctcagcgtcctccgacctcaacggagctgctgttcaggctgcctgt
gagacactgctgaagcgcctggaaccctacaagacgaaaaaccccaaaggcccatgggag
gactgggtgaaggctgcatattttgacagagtcaacctcagcgccaacgggttttataag
actccagatcttgggtacagctttgaaaccaactctggcagagttttcaactacttcagt
tatggagtggcctgttcagaggtggagattgactgtctgaccggagctcatgagaacttg
agcaccacaattgtaatggatgtcggcagcagtttgaacccagctattgacatcggacag
gtcgaagggggattcattcaggggttgggtctctttaccctagaggagcttcattattca
cctgcaggcgtcctcctcactcgtgggcctggttcttacaagatcccagccttcggtgat
attcctacacagctaactgtctctctccttcgtgatgcccccaatgataaagccatcttt
gcctccaaggctgtgggtgagcctcctctcttcctggcgtcatctgttttctacgccatc
aaagatgccattagtgctgcccgggcagagtcgggcctcaaaggaccattcaagctggac
agtcctgcatctgctgagagaatccgcaacgcatgcgttgaccacttcacaaaactgtgt
cctcctgcagagccaggaacctataatccctggtccgttcaagtgtaa
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