Oryzias latipes (Japanese medaka): 101164350 Help Entry 101164350         CDS       T02443                                  Name (RefSeq) protocadherin-15 isoform X2   KO K16500   protocadherin-15 Organism ola  Oryzias latipes (Japanese medaka) Brite KEGG Orthology (KO) [BR:ola00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:ola03037]     101164350    04515 Cell adhesion molecules [BR:ola04515]     101164350 Cilium and associated proteins [BR:ola03037]  Primary cilia and associated proteins   USH complex and associated proteins    101164350 Cell adhesion molecules [BR:ola04515]  Cadherins   Protocadherins    101164350 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin ECD PCDH15_12th Cadherin_FAT4_N Cadherin_CELSR2_9th Cadherin_2 Fibulin_C TagA Motif Other DBs NCBI-GeneID:  101164350 NCBI-ProteinID:  XP_011486285 LinkDB All DBs Position 19:complement(6307943..6539680) Genome browser AA seq 1923 aa AA seqDB search MVVKMVKVRLMGPQSWGQVRWMNLTGVGVLYLLLLSTCVGQEAEDWQYEECKLSRSGPPA TIVAIDEESPNGTLLVENMQINGVAEGPNRTISLSLKENNDYWVILDPSKQALYLNSTGR VLDRDPPSYIHSIVVQVQCTNELIGTVILHEVRIVVRDRNDNTPHFQQPRYYVSISELTP VGTTIFSGFSGNNGATDIDDGPNGQIEYTIQYNPKDPTANRTFDIPLTLFGSVVLRERLN YEDITRYLVIIQANDRAPYPSDRLTATTTLTVDILDGDDLGPMFLPCTLVGNTRDCNPIT YKANVLEVTEPDKVNPLNVTPPIQAVDQDRNIQPPSDRPGILYSILIGKPGSYAEYFSLN RTSAELLLLKPIDRELYRRFDLVIKAEQDNGHPLPAFANLQIEVLDKNNQAPYFLETSYH GYISEASPVGTTIASNSSLSAPLVIIGLDNDVEETRDPQLQFSLDSYSDVFSVSASGIRR YLTLVQPVDRETQDSYTFTLLASDGVQQSAPVTVTVSVLDANDNTPTFSNVSYTINLFTN MMPGETVLQLTAVDPDAGQNGEISYRILAGGLGKFHLDSSSGIITVAPGVQLTVGQRYAL TVEAMDNGPAPHRRSSITTVYIEVLPPNNQSPPRFPRQQYNLEISEAMRTEATLLNLQAV DREMDPITYQIQSGDVTGSFLLQQKSGSLVLSSPLDRESLDYYSLVVTASDGHPDGTSTA IVNIVVTDVNDNDPVFNSSLPVNLSVTEEENHAFVGQVKATDPDLGANGQVHYQLINYQT LFSINASGFITTAVPLDREVKGHYGLVVEASDGAVDPRRSRLTLNVTVLDVDDNSPVFSQ QSYHVNLPENSPKDTVILQLKATDPDLNSNLMYRIGTESLDPEITELFYVHPITGELVVL RALDFEALNKSDATFTLTVEAVDMEGAMPPGVASVTVRIMDMNDFSPEFSQPLYQGMVAP NAVKGTIVTTVLASDADPAGTPAGLVNYRVDQQTRSYSATIFDVEKETGHVITRVNLNEE PNLKFSLVVVAYDHGEPVKENTTLVEITVLQPSVIPVFTQEEYRFPPVSEEAAVGTLVGA IKAAAVNQTIVYSIVDGNQGNIFTLNKTSGEISTAKALDYETKSTYILKVEADSSFNLRA PSKTNTAKVVIDVRDENDHPPVFTKPLYIGGVAENAKTFTSVLQVQALDEDTGNYSAMMY RLIIPPPAGKDTKDSKDGFVIEPYSGVLKTAIMYRNMRRSYFKFEVVATDNYGQGHSSKA EIVVSVVNQLDMQVVVSNVPPTYVDKNKEKLLSILEHYVQEQIPGAKVVMETIGPHRYGE GMDQEDYTKSDLMIYAIDPLTNRAVATQELYKFLDGKLLEINKEFQPLLPPGGRVLEIRT PELVTSVKKAVQSVGYTEGALLALAVIIIVCCVPAILIVIITYRQFKERQAECAKTARIQ MALPTGKPGGGAANNLYEELGDNAMRGFGQQETQQLLRPSLLRPEELSMESGIDPGQEYY TQDYYNYDHGYELPQYGSRRKLISPSGLYDEYGEVVVDDDGSYYYSPQESDGEVKRQFGE DRLALHSWHAEAAPPPVSAPANTAGAPAAEGDASQTKTSRPRGLSAAGRLKAVMRAPALL SAVGKMAARPPWRKARVGPAKEEERRAGGEGYEFREQETNTNLGGERRGREGEAWGRGVR GGEVRNAAKEGRDFPPEYRGALPGSLSPSQVFSPDGTMVIDGSYFQTSPRPPPLKDKPKN HISLVSLARRLQGPSRVMDDPWSPGIHPNSGRMHSSIGDMSVSASVSAQGDAGRRWSEET ENSDSASETENGSGASPSDFSDRSSAVSSLTADTEAYESDLDQEDEDGSRSRTYPGSTAE DDSEEDLEESSDSRWIRSTGKNPSEDLSPIVEDTEEDEGSSSQTEATHQDDEKEGEPGNE CAD NT seq 5772 nt NT seq  +upstreamnt  +downstreamnt atggtggtgaagatggtaaaagtgcgcttaatggggccacagtcatggggccaggtcaga tggatgaatctaacaggagtaggagttctttatctcctgctgctgtcaacctgtgtcggc caggaagctgaagattggcaatatgaggaatgtaaactctctcgatcgggtcctcctgca accatcgtggccatagatgaagaaagtccaaatggaacactgctggtggagaacatgcaa ataaatggtgtggccgagggtccgaatcgaacgatctccctgtcgctaaaggaaaacaac gactactgggtgattctcgacccttccaaacaggcactttacctgaacagcaccggacgg gttctggacagagaccctccatcatacattcactccattgtggtccaggttcagtgtacc aacgaactgattggcactgtgattttacacgaagtccgtattgtcgttcgggaccgcaac gacaatacgccccatttccagcagccaagatattatgtctccattagtgagctcactcct gtaggaacaaccatcttctctggtttttctggaaacaacggagcaacagacattgatgat ggtcccaatggtcagatagagtacactatccagtacaaccccaaagacccaacagccaac agaacatttgacattccactaacattattcgggtctgtagtactccgagaaagactcaac tatgaggacataacacgatacctggttatcatacaggcaaacgaccgagccccttatcca agcgaccgccttacagccaccactacccttacagtagacatcctggatggagacgacctg ggccccatgtttctgccctgtacactcgtaggaaacacccgtgactgtaatcccatcact tacaaggccaatgtacttgaagtgactgagccggataaagtgaaccccctcaatgtgact ccacccattcaggcagtagaccaggacagaaatatacaacctccgtctgacaggccggga atcctatactccatccttataggaaaaccaggttcttatgcggagtacttcagcctgaac agaacctcagcagaactgctgctgctgaaacccattgacagagaactttatcgcaggttt gacctggtcatcaaggcagagcaagacaacggccaccccttgccagcttttgccaatctc caaattgaagttctggataaaaacaatcaggcgccctacttcctggagaccagttaccat ggatacatcagtgaagcatcacctgtaggaaccacaatagcaagtaactcaagcctgtcg gctcctcttgtcatcataggtctggataatgatgtagaggagacacgagatcctcagctc cagttctctctggacagttactctgatgttttctctgtgtccgcctctggaatcagaaga tatctgacgctggtgcagcctgttgacagagagacacaggactcctacacattcacgctt ctggcatctgatggcgtgcagcagagtgctcccgtcacagtcaccgtctcagtgctggac gctaacgacaacactccaaccttttccaatgtctcatacaccatcaacctgttcaccaac atgatgccaggggaaactgtgttacagctgacagcagttgatcctgatgcaggtcaaaac ggtgaaatcagctacagaatcttggctggtggtctggggaagtttcatttagacagcagc agtgggatcattacagtggctccaggagtccagctgactgtcggacaaagatacgctttg acagtagaagccatggacaacggcccggcgcctcacagacggtcatccattacaacagtc tatatcgaagttttgcccccaaacaaccagagccctccccgtttcccacggcaacaatac aacctggagatcagtgaagctatgaggactgaagctacgctgctgaacttacaggcagtg gatcgtgaaatggaccccataacctatcaaatccagagcggagacgtcaccggaagtttt ctcctgcagcagaaatcagggtctttggttctgagcagtcctctggacagagagtctctg gattattattctctggtggtcacagcttcagacggacacccagatggaacttctaccgca atagtgaacattgtggtgactgacgtcaacgacaatgatccagttttcaattcttcgctg ccagtgaacctcagcgtcacagaagaggagaatcatgcttttgttggacaggtcaaggca accgatccagatttgggggcaaatggtcaggtccattatcagctcatcaactaccagaca ctgttttccatcaacgccagcgggttcatcacgactgccgtgcctctggacagagaggtg aaaggccactatggcctcgttgtcgaagcctcggatggagcggttgacccacggcgatcc agactgacgctcaatgtcaccgttctggatgtggatgacaacagccccgtattctcccag caatcttaccacgtcaatctgcccgagaacagcccaaaagatactgtcattctccaatta aaggcgacagacccagacctcaactccaacctcatgtatcgaatcggaactgaaagcctg gatcctgaaataacagagctgttctatgtccaccccattactggggagctggtggttctc agggctctggacttcgaggctctgaacaaatctgacgccacatttacgctcactgtagag gctgtcgacatggagggtgccatgccgcctggagtggcatctgttacggtcagaataatg gacatgaatgacttttccccagagttcagtcagccgctgtatcaagggatggtcgccccc aacgccgtcaagggaaccatcgtgaccacggtcctggccagtgatgctgatccagcggga accccagcaggactggtgaactacagggtggatcagcaaacacgttcatattctgccacg atatttgacgtggaaaaagagacgggacatgtgatcaccagagttaaccttaatgaggag cccaacctgaagttcagcttggtggtggtggcctatgatcatggagagcctgtgaaagag aacacaaccctggtagaaattacagtccttcagccctcggttattcccgtcttcacccaa gaagaatacaggtttccaccagtgagtgaggaggctgccgttggaaccctggtgggggcg attaaggctgcagctgtcaatcaaactatcgtatattccatcgtcgacggcaaccaggga aatatcttcacattgaacaaaacctccggagagatttcaacagccaaggctctggactat gaaaccaaatcaacttacatcctgaaggtggaggctgactcctctttcaacctcagagcc ccctcaaagactaacacagccaaggtggtgattgatgtccgggacgagaacgaccaccca ccagtgttcaccaaacctctctacattggaggagttgcagaaaatgccaagactttcacc tctgtcctgcaagttcaggctttggatgaagacactggtaactacagtgccatgatgtac cggctgatcatcccccctcctgcaggcaaagacaccaaagacagcaaagacggcttcgtc atcgagccgtacagcggtgtgctgaagacggccatcatgtaccgcaacatgaggaggtcc tactttaagtttgaagtggttgccactgacaactacggtcaaggccacagcagcaaggca gagatagtggtgtcagttgtgaaccagcttgacatgcaggtggttgtgtccaatgtccct ccaacctatgtggacaaaaataaagagaagttgctcagcattttggaacattacgtccag gagcagataccgggagcaaaggttgtcatggaaaccatagggcctcatcggtacggggaa gggatggatcaggaagattacaccaaatctgatctgatgatttatgccatcgaccctctg acgaacagagctgtggccacacaagagctctacaagttccttgatggaaagcttttggaa atcaacaaagaattccagcctttacttcctcccggtgggcgagttctggaaatccgaacc cccgagttggtgaccagcgtaaagaaagccgtgcagtctgtgggctacacagaaggggca ctgctggcgttggcagttatcatcattgtttgttgtgttcccgccatactgattgtcatt atcacctacagacaattcaaagagcgccaagcagagtgtgccaaaacagcccgtatccag atggcactgccaacaggtaaacctgggggaggagctgccaacaacctgtatgaggaactg ggagacaacgccatgcgtggatttgggcaacaagagacacaacagctcctccgaccttct ctcctgaggccggaggaattatcaatggaatctggcattgaccccggacaggaatattac acacaggattattacaactatgatcatgggtatgagcttcctcagtacggcagtcgcagg aagctgatctctccatccggcctctacgacgaatacggagaagtggtcgtcgacgacgac ggcagctactactacagcccccaggagtccgatggagaggtgaagagacagtttggtgaa gacagattagccctgcactcctggcacgccgaggccgctcctcccccagtttctgctccc gcgaacaccgcaggggccccggcagccgagggcgacgccagccagacaaaaacgagtaga cctagaggcttaagtgcagcagggaggctgaaggcggtgatgagggcgcctgcgctcctg tccgctgtgggtaaaatggccgcacggcctccatggaggaaagccagagtgggacccgcc aaagaggaggagcgccgagcaggaggagaaggttacgagttcagagaacaagagacaaat acaaatttgggtggagaaaggagaggaagagaaggggaagcatgggggagaggtgtaagg ggaggtgaggtgagaaatgcagccaaggagggaagagacttcccaccggagtacaggggg gcgctccccggctcgctgtccccttcccaggtattcagcccggacggcaccatggtcatc gatgggagttatttccaaacatccccccgacccccaccccttaaagataaaccgaaaaac cacatcagtctggtctctttggcccggagactccaaggcccctcccgggtgatggacgac ccctggagccccggcatccacccaaacagcgggcggatgcacagctccatcggggacatg agtgtttctgcttccgtttccgcccaaggagacgcaggaaggaggtggagcgaagaaacg gagaacagtgacagtgcatcggagacggagaacgggagcggagcgtctccgtcggacttc tccgacaggagcagcgccgtttcatcactcacagctgacaccgaagcctacgagtccgac ctggaccaggaggacgaagacggatctagatctagaacgtatccgggttctacggctgaa gacgacagcgaggaggacttggaggagtcctcggacagcaggtggatccgatcaaccggc aaaaacccctctgaagatttatcccccatcgtggaggacaccgaggaggacgaagggagc agcagccagaccgaagcaacacatcaagacgatgagaaagagggggagccgggaaacgag tgtgctgattga

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