Oryzias latipes (Japanese medaka): 101167940
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Entry
101167940 CDS
T02443
Symbol
bdnf
Name
(RefSeq) brain-derived neurotrophic factor isoform X2
KO
K04355
brain-derived neurotrophic factor
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
101167940 (bdnf)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ola04052
]
101167940 (bdnf)
Cytokines and neuropeptides [BR:
ola04052
]
Cytokines
Growth factors (RTK binding)
101167940 (bdnf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NGF
NTF3_N
Motif
Other DBs
NCBI-GeneID:
101167940
NCBI-ProteinID:
XP_004067087
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All DBs
Position
3:complement(17907662..17920930)
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AA seq
269 aa
AA seq
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MTILFLTMVISYFSCMRAAPLRDAPGMRGHRTEGYLGAAATAVRGHGTLQSGGGPGQHGE
LPSLTDTFEQVIEELLEVEGEAAQLGQGADKSQAGGGPSPVVAAETKDVDLYNSRVMISN
QVPLEPPLLFLLEEYKNYLDAANMSMRVRRHSDPSRRGELSVCDSISQWVTAVDKKTAID
MSGQTVTVMEKVPVPNGQLKQYFYETKCNPMGYTKEGCRGIDKRHYNSQCRTTQSYVRAL
TMDSKRKIGWRFIRIDTSCVCTLTIKRGR
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcctgttccttactatggttatttcatacttcagttgcatgagagctgcgccc
ctgagagatgccccgggcatgcggggccatcggacggaaggctacctgggcgccgctgcg
acggccgttcgaggccacgggactctgcagagcggcggcgggccgggccagcacggggaa
ctcccctcactcacagacacatttgagcaagtgatagaagagctgctggaggtggaggga
gaggcggcgcagctgggacagggggcggataagagccaggcaggtgggggcccatcgcct
gtggtcgccgcagagaccaaggatgtcgacctgtacaattcgcgggtgatgatcagcaac
caagtgcctttggagccgccgttgctctttctcctggaggaatacaaaaactatctggat
gccgctaacatgtccatgagggtgcggcggcactctgatccatcgaggcggggagagctc
agtgtgtgtgacagtattagccagtgggtgacggctgtggataaaaagacggcaatagac
atgtctgggcagacggttaccgtcatggaaaaggtccctgtccccaatggccaactgaag
caatacttttatgagaccaaatgcaaccccatggggtacacaaaggagggctgcagagga
atagacaagcggcattataactcccaatgcaggacaacccagtcctacgtgcgagcactc
accatggatagcaaacggaagattggttggcggtttataaggatagacacttcctgtgta
tgcacattgaccattaaaagagggagatag
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