Oryzias latipes (Japanese medaka): 101168742
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Entry
101168742 CDS
T02443
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04514
Cell adhesion molecules
ola04520
Adherens junction
ola04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
101168742
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
101168742
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
101168742
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ola01009
]
101168742
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ola04515
]
101168742
Enzymes [BR:
ola01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
101168742
Protein phosphatases and associated proteins [BR:
ola01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
101168742
Cell adhesion molecules [BR:
ola04515
]
Immunoglobulin superfamily
Type II RPTP family
101168742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
fn3_2
ig
Interfer-bind
Tc-R-P
PTP-SAK
V-set
CRLF2-like_D2
DSPc
Fn3_VIN3
C2-set_2
Y_phosphatase3
Fn3_PTPRU
PTPlike_phytase
PTP-NADK
Ig_C17orf99
MpPF26
ICAM_N
Motif
Other DBs
NCBI-GeneID:
101168742
NCBI-ProteinID:
XP_023821022
LinkDB
All DBs
Position
17:complement(30584737..30730227)
Genome browser
AA seq
1927 aa
AA seq
DB search
MAPSVHLSGPPLPRGGVMLLLLLSCTVFCSLADSQPSFVKIPEDQTGISGGVASFVCQAS
GEPRPRITWMKKGKKVSSQRFEVIDFDDGSGSVLRIQPLRTHRDEAIYECTATNTAGEIT
VNAKLTVLEENQIPHGFPNIDMAPQLKVVERTRTATMLCAASGNPDPEIFWFKDMLPVDV
SNSNGRIKQLRSGGTPIRGALQIENSEESDQGKYECVAMNSAGTRYSAPANLYVRDQREV
RRVPPRFSIPPSNLEVMPGGSVNLTCVAVGSPMPYVKWMKGEVELTKEEDMPLGRNVLEV
TNIRESANYTCVAISSLGTIEATAQVTVKALPKPPTSLTVTETTATSVTLTWLSGNPEPV
SYYMIQYRGKSSDNGFQEVEGVATTRYSIGGLSPYSEYEFRVMAVNNIGRGPPSDPVETR
TGEQAPSSPPLHVQARMLSSSTMLVQWEPPEEPNGQIRGYRVYYSPDMSPPLSAWTKHNT
DDSSLTTISGLTPDITYSLRVLGFTSVGDGPPSDVLQVKTQQGVPAQPSSFEAEAELDTR
IRLSWLWPVQDPITQYELQYWEDGTDNKMYVRFDPAGSHAVDGLKPDTLYHFSLAARSEM
GLGVYTQPIKARTAQSTPSAPPQEVHLVSLSSTSLKVSWVAPPAASRHGAIVRYTVSYQA
LSGEDTERQEVADIGADASSYVLDGLEKWTEYQVWVRAHTDVGPGPESAPVKMRTKEDVP
GAPPRKLEVEALNSTAIKVSWKPPLQGKQHGQIRGYQVIFSRLENGEPRGQPNILDIALP
EAQWNIDESTEHEAIIGGLQAETTYSVTVAAYTTKGDGARSKAKVITTSGAVPGKPSMMI
SATSGNTALIQWQPPKEMVGELMGYQLQYKRTDEEGFSSRDLRKTDDHYTVTGLHKGATY
VFRLSARNRAGIGEAYVKEISTPEDTPSGYPTNLQVTGLTQSSTRLTWEPPLLPERNGRI
VSYVVVYRDINSQQNSTNRTTDTQMNIQGLNPDTTYDIRVQAFTSKGGGPLSPSIQSRTM
SNDFPTLNFGVKAVTETSVLLTWDLPPNYKSQAPFKILYNQQSVEVQGNLKRKLISQLQP
DTDYSFVLTSRGNIAGGLQQQVSIRTAPDLLQAKPSKHLALGSRITISLPAVQTSARVSW
YYIVLVPSSQSARRWKNPDDMDLEELLRSSEGPVLRRRRHLDPAKPYIAAKLTSLPATFT
LGDEKMYNGFYNKPLSSQQEYLCFVLAVLRYEETNNTANYMTFSASPYSDPILVKTERAE
GLEQAEMLWVMGPVLAVVLIIVFVIGIILFKNKQERKRASPLPKDEHSGGVKDSLLGNSS
DPVEMRRLNYQTPGPSSHRCPNTPRMREHPPISVAALADHIERLKANDSLRFSQEYESID
PGQQFTWEHSNMEVNKPKNRYANVIAYDHSRVVLTSIDAVPGSDYINANYIDGYRKQNAY
IATQGPLPETLSDFWRMVWEQRSSTVIMMTRLEEKSRVKCDQYWPSRGTETYGMIQVTML
DTVELATYSVRTFALYKNGSSEKREVRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPLD
AGPMVVHCSAGVGRTGCFIVIDAMLERMKHEKTVDIYGHVTCMRAQRNYMVQTEDQYIFI
HEALLEAATCGNTEVPARNLYAHIQKLTQPPPGETVTAMELEFKRLANSKAHTSRFISAN
LPCNKFKNRLVNIMPFESTRVCLQPIRGVEGSDYINASCIDGYRQQKAYLATQGPLAETT
EDFWRMLWEHNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILR
EFKVTDARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCS
AGVGRTGVFITLSIVLERMRYEGVVDLFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLG
SFDHYAT
NT seq
5784 nt
NT seq
+upstream
nt +downstream
nt
atggctcctagtgttcacctgtctgggccccccctacccagagggggggtgatgctgctg
ctcctgctcagctgcacggtcttctgctcgctggccgacagccagccaagttttgtgaaa
atccctgaagatcagaccggcatctcgggcggcgtggcttcgtttgtgtgccaggcctcc
ggggagcccaggccccgcatcacctggatgaagaaagggaagaaggtcagctcccagcgc
ttcgaggtgattgacttcgacgatggttccggttcggttctgcggatccaaccgctgcgc
actcacagagacgaggccatttacgagtgcacggccaccaacaccgctggcgagatcacg
gtcaacgccaagctcaccgtgctggaagagaaccagatcccccacggcttccccaacatt
gacatggccccccagctgaaggtggtggaaaggacccggacagccaccatgctgtgcgcc
gccagcggaaacccggacccagagatcttctggttcaaggacatgcttcccgtggacgtc
agcaacagcaacggccgcatcaagcagctccgctcaggtggtacccccattcgaggagcc
ctgcagatcgagaacagcgaggagtctgaccaggggaagtacgagtgcgtcgccatgaac
agcgctggaacccgctactctgctccggccaatctctacgtcagagatcagcgtgaagta
cggagagtcccgccgaggttctccatccccccctccaacctggaggtgatgcctggcggc
agcgtcaacctgacctgcgtggcggtcggctcgcccatgccctacgtgaaatggatgaag
ggggaggtggagttgaccaaggaggaagacatgccgttgggacgcaacgtgttagaggtc
accaacatccgagagtccgccaactacacctgcgtggccatttcctccctgggcaccatt
gaagccacggcgcaggtcaccgtcaaagccttaccaaagccccccacctccctcaccgtc
accgagacaacggccaccagcgtgactctcacctggctctcgggaaacccagaacccgtg
tcctactacatgatccagtaccgaggcaagtcctccgacaacggcttccaggaggtggag
ggcgtggccaccacccgctacagcatcggcggtctgagtccttactcggagtacgagttc
cgggtcatggccgtcaacaacattggccggggaccgcccagcgacccggtggagacccgc
accggagaacaagccccctcctcacctcctctgcacgttcaggcgcggatgctgagctcc
tccaccatgctggtccagtgggagcctccggaggagccaaacggacagatccgaggttac
cgggtctactacagccccgacatgagtcctccgctcagcgcctggaccaaacacaacacg
gacgacagcagcctgaccaccatctcggggctgacgccggacatcacctacagcctcagg
gtgctgggcttcacctcggtgggcgacgggcccccctctgacgtcctgcaggtcaaaact
cagcagggagtccccgcccagccgtccagcttcgaggctgaagcggagctggacactcgg
atccggctgtcctggctgtggccggtccaagatcccatcactcagtatgagctgcagtac
tgggaggacggcacggacaacaagatgtacgtgaggttcgacccggccggctcccacgcc
gtggacggcctgaagcccgacactctgtaccacttttcgctggcggcccgttctgaaatg
ggcttgggcgtctacactcaacccatcaaggcccgcaccgctcagtccactccatctgcc
ccccctcaagaagtccatctagtcagcctgagctcgaccagcctgaaggtgagttgggtg
gcgccgccggccgctagccgccacggcgccatcgtgcgctacacggtcagctaccaggcc
ctgtcaggagaggacacggagaggcaggaagtggcggacattggcgccgacgccagcagc
tatgtgctggacggcctggagaagtggaccgagtatcaggtgtgggtgagggcccacact
gatgtggggccaggacccgagagcgccccggtgaagatgagaaccaaggaggatgtgcca
ggagccccccccaggaagttggaggtggaggctctgaactccacggccatcaaagtctcc
tggaagccccccctacagggcaaacagcacggccagatccggggctaccaggtcatcttc
tcccggctggagaacggcgagcctcgaggtcagcccaacatcctggacatcgctctgcca
gaggcgcagtggaacattgacgagtccaccgaacacgaggccatcattggggggctgcag
gctgagaccacctactctgtcactgtagcggcctacaccaccaagggggacggagctcgc
agcaaagccaaagtcatcaccacatctggggcagtcccggggaagcccagcatgatgatc
agcgccacctccggcaacacggctctgatccagtggcagccgcccaaggagatggtgggg
gagctgatgggctaccagctgcagtacaagcgcacggacgaggaggggttcagctcacgc
gacctgaggaagacggacgaccactacaccgtcaccggcctgcacaagggcgccacctac
gtcttccgcctcagcgcccgcaaccgggccggcatcggggaggcctacgtgaaggagatc
agcacccccgaggacacgccctccggctaccccaccaacctgcaggtcaccggactgacc
cagtccagcacccgcctgacctgggagccccccctgctgcctgagcggaacggcaggatc
gtgtcctacgtggtggtgtaccgggacatcaacagccagcagaacagcaccaaccgcacc
accgacacgcagatgaacatccagggcctcaaccccgacaccacctacgacatccgtgtg
caggccttcaccagcaagggcgggggccccctgagccccagcatccagagcagaaccatg
tccaacgatttcccgactctcaactttggcgtcaaagccgtgaccgaaacgtctgtcctc
ctcacctgggatttacctcccaactacaagtcccaggctcctttcaagatcctctacaac
cagcagagcgtggaggtgcagggaaacctgaagaggaagctcatcagtcagctgcagccc
gacaccgactactccttcgtgctgacgagccgcggcaacatcgccggaggcctgcagcag
caggtgtccatcaggaccgccccggacctcctccaagccaagcccagcaaacacctggcg
ctcggtagcaggataaccatcagtctgccggcggtgcagaccagcgctcgcgtcagctgg
tactacatcgtgttggttccttcgtcccagtcggcgcggcgctggaagaaccccgacgac
atggacctggaggagctcctcaggtccagcgagggtccggtcctccggcgcaggcgtcac
ctggatcccgccaaaccgtacatcgccgccaagctgacctccctgccggccaccttcacg
ctgggcgatgagaagatgtacaacggcttctacaacaaacccctgagcagccagcaggag
tacctgtgcttcgtcctggcggtcctccgatacgaggagaccaacaacacggccaactac
atgaccttctccgccagtccgtactcggaccccatcctggtgaaaacggaaagggccgag
ggtctggagcaagccgagatgctgtgggtgatggggccggtcctggccgtggtgctcatc
atcgtcttcgtcatcggcatcatcctcttcaaaaacaaacaggaaaggaagcgggcgtcg
cctctaccaaaggacgagcactcgggcggagtcaaagactcgctgctgggcaactcctcc
gaccccgtggagatgagaagactcaactatcagaccccaggtcccagctctcatcgctgc
cccaacactccaaggatgagagagcacccccccatttcggtggcggcgctggccgaccac
atcgagcggctgaaggccaacgacagcctgcgcttctcccaggagtacgagtccattgat
ccgggccagcagttcacctgggaacactccaacatggaggtgaacaaaccgaagaaccgc
tatgcaaacgtcatcgcctacgaccactccagggtggtgctgacctccatcgacgccgtg
cccggcagcgactacatcaacgccaactacatcgacggctacaggaagcagaacgcctac
atcgccactcaggggccgctgccggagacgctcagcgacttctggaggatggtgtgggag
cagaggtccagcaccgtcatcatgatgacccgactggaggagaagtcccgggtgaagtgt
gaccagtactggccgtcgcgaggaaccgagacctacgggatgatccaggtcaccatgctg
gacaccgtggagttggccacctacagcgtccgaaccttcgctctctacaagaatggctcc
agtgagaagagagaggtgaggcagttccagttcatggcctggccagaccacggggtcccc
gagtaccccacacccatcctggccttcctgcggcgggtcaaggcctgcaaccccctggac
gcaggccccatggtggtccactgcagcgccggcgtgggcaggaccggctgcttcatcgtg
atcgacgccatgctggagcgcatgaagcacgagaagacggtggacatctacggacacgtg
acgtgcatgcgtgcgcagaggaactacatggtccagacagaggaccagtacatcttcatc
cacgaggccctgctggaggccgccacctgcggcaacaccgaggtcccggcgcgcaacctg
tacgcccacatccagaagctcacccagcccccgcccggcgagaccgtcactgccatggag
ctggagttcaagcggctggccaactccaaggcccacacgtcccgcttcatcagcgccaac
ctgccctgcaacaagttcaagaaccggctggtcaacatcatgccgttcgagtccacccgc
gtctgcctgcagcccatccgcggcgtggagggctccgactacatcaacgccagctgcatc
gacggatacagacagcagaaggcgtacttggccacgcagggacccctggctgagaccacc
gaggacttctggaggatgctgtgggagcacaactccaccatcgtggtcatgctcaccaag
ctgcgagagatgggccgggaaaagtgccatcagtactggcctgcagagcgctcggcccgg
taccagtactttgtggtggaccccatggctgaatacaacatgccccagtacattcttcga
gagttcaaggtcacagacgcccgggatggacaatccagaacaatccgccagttccagttc
acagactggcctgagcagggagtgccaaaaaccggagagggcttcattgatttcattgga
caggtgcacaaaaccaaggagcagtttggacaggacggccccatcacggttcactgcagt
gctggagtgggccggaccggagtcttcatcaccctcagcattgtgctggagcggatgagg
tacgaaggcgtggtcgaccttttccagacggtgaagacgcttcgcacccagaggccggcc
atggtgcagactgaggaccagtaccagctgtgctacagggccgctctggagtacctgggg
agctttgaccactatgcaacataa
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integrated database retrieval system
