Oryzias latipes (Japanese medaka): 101168921
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Entry
101168921 CDS
T02443
Name
(RefSeq) actin, cytoplasmic 2
KO
K05692
actin beta/gamma 1
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03082
ATP-dependent chromatin remodeling
ola04145
Phagosome
ola04210
Apoptosis
ola04510
Focal adhesion
ola04520
Adherens junction
ola04530
Tight junction
ola04810
Regulation of actin cytoskeleton
ola04814
Motor proteins
ola04820
Cytoskeleton in muscle cells
ola05100
Bacterial invasion of epithelial cells
ola05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101168921
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
101168921
09143 Cell growth and death
04210 Apoptosis
101168921
09144 Cellular community - eukaryotes
04510 Focal adhesion
101168921
04520 Adherens junction
101168921
04530 Tight junction
101168921
09142 Cell motility
04814 Motor proteins
101168921
04820 Cytoskeleton in muscle cells
101168921
04810 Regulation of actin cytoskeleton
101168921
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
101168921
05100 Bacterial invasion of epithelial cells
101168921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ola03021
]
101168921
03019 Messenger RNA biogenesis [BR:
ola03019
]
101168921
03036 Chromosome and associated proteins [BR:
ola03036
]
101168921
03029 Mitochondrial biogenesis [BR:
ola03029
]
101168921
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ola04812
]
101168921
04147 Exosome [BR:
ola04147
]
101168921
Transcription machinery [BR:
ola03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101168921
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
101168921
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
101168921
NuA4 complex
101168921
Chromatin remodeling factors
BAF complex
101168921
PBAF complex
101168921
GBAF(ncBAF) complex
101168921
SWR1 complex
101168921
Mitochondrial biogenesis [BR:
ola03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
101168921
Cytoskeleton proteins [BR:
ola04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
101168921
Exosome [BR:
ola04147
]
Exosomal proteins
Proteins found in most exosomes
101168921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
101168921
NCBI-ProteinID:
XP_004066026
UniProt:
A0A3P9KP58
A0A3B3HC03
LinkDB
All DBs
Position
1:complement(22455324..22458667)
Genome browser
AA seq
375 aa
AA seq
DB search
MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPTTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaaattgctgccctcgttattgacaatggatctggtatgtgcaaagctggg
tttgctggggatgacgctcctcgtgccgtcttcccctccatcgttggccgcccccggcat
cagggtgtgatggttggtatgggccagaaagacagctatgttggtgatgaagcacagagc
aaaagaggaatccttaccctcaaataccccattgagcatggtattgtaaccaactgggac
gacatggagaagatctggcatcacaccttctacaatgagctcagagttgcccctgaggag
catccagtcctgctgactgaggcccccctaaacccaaaggctaacagagaaaagatgacg
cagatcatgtttgagaccttcaacactcctgccatgtacgtggccatccaggctgtgctc
tccctgtacgcctctggacgcaccaccggaatcgtcatggattctggtgacggtgtgacc
cacacagtacccatctatgaaggctacgctctgccccatgccattctgaggctggacctg
gctgggagagacctcacagactacctcatgaaaatcctgactgagaggggttacagcttc
actaccacagctgagcgtgagattgtgcgtgacattaaggagaagttgtgttatgttgca
ctggactttgagcaggagatgggaactgctgcatcttcatcctcactagagaagagctac
gaactgccagacggccaggtcatcactattggaaacgagcggttccgttgtccagaggcg
ctcttccagccttctttccttggtatggagtcttgtggtatccatgaaactacctttaac
agcatcatgaagtgtgatgttgatatccgtaaggacttgtatgccaacactgtgctgtct
ggcggtaccaccatgtaccctggcattgctgaccgcatgcagaaagagatcactgccttg
gcccccactacaatgaagattaagattatcgcacctccagagaggaagtactctgtatgg
attggcggctccatcctggcttccctgtcaaccttccaacagatgtggatcagcaagcag
gaatatgacgagtctggccccagcatcgtccacagaaaatgcttctaa
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integrated database retrieval system