Oryzias latipes (Japanese medaka): 101170487
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Entry
101170487 CDS
T02443
Name
(RefSeq) low-density lipoprotein receptor-like isoform X1
KO
K12473
low-density lipoprotein receptor
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101170487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101170487
Membrane trafficking [BR:
ola04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
101170487
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
EGF_CA
cEGF
Arylesterase
EGF_3
SGL
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
101170487
NCBI-ProteinID:
XP_023813781
LinkDB
All DBs
Position
8:complement(21240357..21255414)
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AA seq
462 aa
AA seq
DB search
MFGGHARQESTPTTVAWAHSGAEPSSHQAGAVNGTATVMCNNSICIPRQSACDGYNDCLD
GSDEWPQSCHAESPVTLASHQCHSMEFHCGSGEYIHGSWKCDGDADCLDGSDEAGCTRST
CRPDEFECGDGTCIHGSRQCNQQYDCRDTTDESGCVDVTRCEGPDKFKCRSGECITMERV
CDSKRDCRDWSDEPLRECGSNECLYNNGGCSHICNDLKIGHECLCPTGYSLRDKRRCEDI
DECASPDTCSQTCINTMGSYKCECEEGYQVDPVTKACKSIGTIAYLFFTNRHEVRKMTLD
KSEYTRVIPRLKNVVALDIDVATKEIYWSDISLKKIYRTNIDSADDSTQHQTVIDSDVDA
PEGIAYDWVHKNLYWTDSIRSTISVATADGSHRKTLFHQGLSKPRAIVVDPHSNFLYWTD
WGNPAKIEKGGLNGVFVLLHDALCALNGPLRLSQSRCIDMET
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggggccatgcacgccaagagtcaacacccacaaccgtggcctgggcacatagt
ggtgcagagccctccagtcaccaggctggagctgtcaatgggacagcaactgtgatgtgc
aacaacagcatctgcatccctcgccagtctgcctgcgacggttacaacgactgccttgat
ggctcagacgagtggccccagagctgccacgccgaatcccccgtgacgctcgcctctcat
cagtgccactcgatggagttccactgtggcagcggagagtacatccacggcagctggaag
tgtgatggagatgctgactgcttggatggatctgatgaagctggctgcactcgctccacc
tgccgtccagatgagtttgaatgtggcgatggaacctgtatccacggcagtcgccagtgc
aaccagcagtacgactgcagagacacgactgacgaatccggctgtgttgacgtgacccgc
tgtgagggcccggacaagttcaagtgccgcagtggggagtgcataaccatggagagagtg
tgtgacagcaaacgggactgcagggattggtcagatgagcctcttcgggaatgtggctcc
aacgaatgtctttacaacaatggcggctgctctcacatttgcaatgacctgaaaatcggc
catgagtgcttgtgtcccactggatatagcctcagagacaaaagacggtgcgaagatatt
gatgagtgcgccagtccagacacctgcagccagacctgcattaacacgatgggcagctac
aaatgtgaatgtgaggagggttaccaggttgacccagtaaccaaagcatgcaaatctatt
ggtacaatagcctacctcttcttcaccaatcgtcatgaagtgagaaagatgactcttgac
aaaagcgagtacactcgagtaattccccgcctaaagaatgtggtggcgctggacattgac
gtagccactaaagagatctactggtcagacatttctctgaagaaaatctacagaacaaac
atagactcagctgacgactcgactcagcaccaaacagtcatcgacagcgacgttgatgcc
cctgaaggaatcgcctacgactgggtccataaaaacctctattggaccgacagtattcgt
agcactatctctgtggcaaccgctgatggcagccatcgcaaaactctcttccaccaaggc
ttgtcgaagcctcgggcgatagtggtcgacccccatagcaactttctttactggactgat
tggggaaatccggctaagatcgagaagggaggtctcaatggtgtgtttgtacttcttcat
gatgctctctgtgctttaaatggacctctgagactatcacagagcaggtgcattgatatg
gagacttga
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