Oryzias latipes (Japanese medaka): 101170963
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Entry
101170963 CDS
T02443
Name
(RefSeq) sodium channel protein type 4 subunit alpha A isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ola04040
]
101170963
Ion channels [BR:
ola04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
101170963
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
101170963
NCBI-ProteinID:
XP_023805322
LinkDB
All DBs
Position
19:16031497..16067522
Genome browser
AA seq
1863 aa
AA seq
DB search
MATLLPPHGTDFFRPFTRESLVEIERLEAESKKLVKVEEENEAAAPHPDLEAGKNLPMIF
GDPPPELLNTPLEDLDPFYKAQKTFIVISKGNTIYRFNAEPACYILSPFSLVRRGAIKIL
IHPLFSMFIMITILSNCVMMTMSNPPAWSKTIEYVFTGIYTVEATIKVLSRGFLVGSFTF
LRDPWNWLDFMVISMAYITEFVDLGNISALRTFRVLRALKTITVIPGLKTIVAALIQSVK
KMVDVMVLTVFALAVFALVGLQLFMGNLRQKCVRWPILTNETTSEFLNSSSTFNHTVDFN
NITANNNSVYSNSTFNFMEYIENIENYYYLDGSKDALLCGNSSDAGKCPDGFTCMKAGRN
PNFGYTSFDSFGWAFLALFRLMTQDYWENLFQLILRAAGRTYMLFFVAIIFLGSFYLINL
ILAVVAMAYEEQNQATQREAIEKEEEFQRLLEQLKNQEKANALGSQGTLTSGKSLSHCTK
SEDEHSFKDGETVKDCNGRLVPHLIIRAPTMTEVSPSAADYEQKAKSLESVHTMLHVDQG
LTQRSSSATTVLTTMEELEEAQRPRPPCWYRFADMFLKWNCCMSWVVFKKWVHFVVMDPF
VDLAITICIVLNTLFMAMEHYPMTAEFDHMLSVGNLVFTGIFTAEMFFKLIAMDPYYYFQ
VGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGA
LGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKISSDCELPRWHMNDFFHSFLIVFRILC
GEWIETMWDCMEVAGTAMCLIVFMMVMVIGNLVVLNLFLALLLSSFSGDNLAPGDEDGEM
NNLQIAISRLTRGTDWLKAFAIRKVLQMIGRKPKKADISCVDDVSSRTEAIEINHFNTCQ
PLTAAEKTPECTAESRPLTFFLDGNLHLNVPIAEQESDFENLSVDDEEDDEEDCDSSDVA
EKGNSQHNSINLGDETSILEKTQLKEALDEDGSSVCSTVDYQPPEPEPEVIEEEEPELEE
PEACFTDKCVSRWPCLTVDVTKGKGKKWWNLRKTCFTIVEHDWFETFIVFMILLSSGALA
FEDVHIERRRTIKTILEFADKVFTYIFVIEMLLKWVAYGFKTYFTNAWCWLDFFIVDISL
VSLVASWLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIFNVMLVCLI
FWLIFSIMGVNLFAGKFYRCINTTTDAIFTLAEVNNHSECDALNEDTQEARWVNVKINFD
NVGKGYLSLLQVATFKGWMDIMYAAVDSREIEEQPSYEINLYMYMYFVIFIIFGSFFTLN
LFIGVIIDNFNQQKRKFGDQDIFMTEDQKRYQEVMRKLGSKKPQKPIPRPTNFLQGMVFD
LISQQFFDIFIMVLICLNMVTMMVETDDQSAEMEDFLFKLNVAFIVVFTGECLLKLFALR
HYFFTNGWNVFDFIVVILSIAGTMLSDLIEKYFVSPTLFRVIRLARIGRILRLIKGAKGI
RTLLFALMMSLPALFNIGLLLFLIMFIFSIFAMSNFAYVKKEAGIDDIFNFETFGGSIIC
LFQITTSAGWDGLLLPILNREPPDCDPDFENPGTDVKGNCGNPGMGMMFFCSYIIISFLV
VVNMYIAIILENFNVAQEESGDPLCEEDFEMFNETWEKFDLDGTMFINYCQLSDFCDALQ
EPLRVAKPNRLHLIEMDLPLVIGDRLHFVDVLMAVTQMVLGDTVEMAAMRESIQVKFAMS
NPSKDSFAPITTTVRHKEEHTAAIIIQQAYRKHLLKRCIHRAAVLHRLKRMGKQDEGEDP
LEKGLLEKQLGILYGSSQDLAEEVEQVATGGYTLEPEKMVVPVEIVKDMLLHSSPNQNRR
TSQ
NT seq
5592 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccctgctccctccccacggtactgacttcttccgccccttcaccagagaatca
ctggtggagattgagaggctcgaagcggaaagcaaaaagctagtcaaagtagaggaggag
aatgaagcagcagccccacaccctgatctggaggctggcaaaaatttgcccatgatattt
ggtgatcctcccccagagctgctcaacacgccactggaggacttggatcccttctataaa
gcacagaaaacattcattgtaatcagcaaaggaaacaccatctacaggttcaacgctgaa
ccggcatgttacattctgagtccctttagcctggtccggagaggagccatcaaaattctc
atccatccattgtttagcatgttcatcatgattacaattctatcaaattgtgtcatgatg
actatgagtaatccaccggcatggagcaaaaccattgagtatgtgtttaccggtatttat
accgttgaagcaacaatcaaagtgttgtccagaggtttccttgttgggtcttttacattc
ctacgagatccatggaattggctggatttcatggtgatcagcatggcttacatcactgag
tttgttgaccttggcaacatatcagccctcagaacctttcgggtacttcgagccctgaaa
acaataactgtgatacctggtttgaagacgattgttgctgctttaatccagtcggtgaag
aaaatggtggatgtcatggtcctcaccgttttcgccctggcggtttttgctcttgttggc
cttcagctgttcatggggaacctgcgtcagaaatgtgtgcggtggcccatcctgacaaac
gaaaccacatcagagtttttaaactcctcatcaacattcaaccacacagtggacttcaac
aacatcacggccaacaataacagtgtttactctaacagcactttcaatttcatggaatat
attgaaaatatagaaaattactattatttggacggcagcaaagatgctctgctatgtggt
aacagctctgatgctggaaagtgtcctgatggattcacatgcatgaaggcaggcaggaac
cccaactttggttacacaagctttgactcttttggctgggccttccttgctctcttccga
ctcatgacccaggactactgggagaaccttttccagctgatcttgcgggcagctggaagg
acatacatgctgttctttgtggcaattatctttctgggttctttctaccttatcaatctc
atcctggctgtggttgccatggcttacgaagaacagaatcaagcaactcagagagaagca
attgagaaggaggaagagtttcaacgtttgttggagcaacttaaaaaccaagaaaaagct
aatgctcttggaagtcaagggactctcaccagcgggaagtcgcttagccactgcacaaaa
tctgaggatgaacatagtttcaaagatggagaaacagtcaaggactgcaatggcagactt
gttccccacctgataatcagagctcccaccatgactgaggtgagcccgtctgcagcagat
tatgaacagaaggcgaagtctttagagtctgtgcacaccatgcttcacgtggatcaaggt
ctgacacagagatcctccagtgccacgactgtgctgaccacaatggaagagttggaggag
gctcagaggcctcgcccgccatgctggtacaggtttgcagacatgtttctgaagtggaat
tgttgcatgtcctgggttgtcttcaaaaaatgggtacactttgtggttatggaccccttt
gttgacctggctattaccatctgcattgtcctcaacaccctcttcatggcgatggagcac
tatcctatgactgcagagtttgatcacatgctctctgtgggcaacctggtttttactgga
attttcactgcagaaatgtttttcaagcttattgcaatggatccctattactactttcaa
gtcggctggaatatttttgacagcatcattgtcactctaagtctggtggaattgggactt
gcaaatgtccagggtctgtccgtgctcaggtcttttcgtttgctacgtgtctttaaactg
gcaaagtcgtggccaacactcaacatgctaatcaagatcattggtaactcagtcggagct
ttgggaaacctgactttggttctggccatcatcgtcttcatttttgctgttgttggcatg
cagctctttggaaagagttacaaggaatgtgtgtgcaagatctcgtcggactgcgagctg
ccacgttggcacatgaatgacttcttccactcattcctcattgtgttccgcatcctgtgc
ggggaatggatcgagaccatgtgggactgtatggaagtggccgggacggcgatgtgttta
attgtcttcatgatggtgatggtaattggaaatctagtggtgttgaatctcttcttagcc
ttgctgctgagctcattcagcggcgacaacctcgcaccgggggacgaagatggagagatg
aacaacctgcagattgccataagcaggctcacacggggcactgattggctgaaagcattc
gccatccgaaaagtcctgcagatgattggcaggaagcctaagaaagctgatattagttgt
gtggatgacgtcagctcaagaacggaagcaattgaaattaaccattttaacacctgtcag
cctttaacagctgcagaaaagacgccagaatgtacggctgaaagccggcccctcacgttt
tttctggatggaaatcttcacctgaatgtgcctattgccgaacaggaatcggattttgaa
aatctgagcgtggatgatgaagaagacgatgaagaggattgtgactcctcagatgttgca
gaaaaaggaaatagtcaacacaattcaataaacctgggagatgaaaccagcatcctagaa
aaaactcaactaaaggaggctttggatgaggatggttcttcagtgtgcagtacggtggac
tatcaaccacctgagcctgaaccagaggtaatagaggaggaagagccagaattggaggaa
ccggaggcctgcttcactgacaagtgtgtgagcaggtggccgtgtttgactgtggatgtc
actaagggcaaagggaagaaatggtggaacctcaggaaaacttgctttacaatagtggaa
catgactggtttgaaaccttcattgtctttatgatcctcctcagcagtggagctctggcc
tttgaagacgtccacatagaaagacgccggaccatcaaaaccattctagagtttgctgac
aaggtcttcacttacatctttgttattgagatgctcctcaaatgggttgcatacggattc
aagacctacttcaccaatgcttggtgttggctcgatttttttattgtagatatttctctg
gttagtttggtggcgagttggcttggatactctgaccttggaccaatcaaatctctcagg
actctgagggcactaaggcctctacgtgctctgtcgagatttgaagggatgagggtggtg
gtgaacgcccttgttggagcaattccctccatcttcaatgtgatgctggtgtgtctcatt
ttttggctcatcttcagcatcatgggagttaatctttttgctgggaagttctaccgttgc
atcaacaccaccacagatgcgatttttactcttgctgaggtcaacaatcacagtgagtgt
gacgccctcaacgaagacacacaggaggctcgctgggtgaatgtcaaaatcaactttgac
aatgttggaaaaggttacctgtccctgcttcaagtggcaacttttaagggttggatggac
atcatgtatgctgctgtggactcgagagagattgaggagcaaccttcctatgaaatcaac
ctctacatgtacatgtattttgtcatcttcatcatctttggttctttcttcaccttaaac
ctcttcattggtgtcattattgataactttaaccaacagaagagaaagtttggagaccaa
gacatcttcatgaccgaagatcagaaaagataccaagaagtcatgagaaaacttggttcc
aagaagccacagaagccgattcctcggccaacaaacttccttcagggcatggtgtttgac
ctgatcagccagcagttctttgacatcttcatcatggtcctcatttgtctcaatatggtg
accatgatggtggagacagatgaccaaagcgcagagatggaggatttcctcttcaaacta
aatgtagctttcattgtcgtcttcactggagagtgcttgttgaagctatttgcactacga
cattactttttcaccaatggctggaacgtctttgacttcatagtggtcatcttatcaatc
gctgggacaatgctttcagatttaattgagaagtactttgtgtcaccaactttattcaga
gtgatcagactggccaggattggaaggattttgcggctcattaaaggagcaaagggtatt
cggactcttctctttgcgcttatgatgtcacttcctgccctgttcaatattggtctcctc
ctcttcctcatcatgttcatcttttccatatttgccatgtcaaactttgcttatgtcaaa
aaggaggctggtatcgatgacatatttaattttgaaacgtttggaggtagcatcatctgc
ttgtttcagatcactacctcagcaggatgggatggccttttacttccaatattgaacaga
gagcctcctgactgcgatccagactttgagaatcctggcacagatgtaaagggtaactgt
ggcaacccaggcatgggtatgatgttcttctgtagctatattatcatctccttcttagtt
gtggtcaacatgtatattgcaattattctggagaactttaatgtggcacaagaggagagt
ggtgacccgctatgtgaggaggacttcgagatgttcaatgagacctgggagaagtttgac
ttggatggaactatgttcatcaactactgccagctctcggacttctgtgatgcccttcaa
gagccattgcgggttgccaaaccaaaccggctccacctaattgaaatggatcttcctttg
gttattggagacagacttcactttgtggatgttttgatggctgttactcagatggtattg
ggagacacggtggaaatggcagcaatgcgggagagcatccaggttaaattcgctatgagc
aacccgtcaaaagactcctttgcaccaatcaccacaacagtgcgccacaaagaagagcac
acagctgctataatcattcagcaggcataccgcaaacatctcctgaagcgttgcattcac
cgtgctgctgttttgcaccgtttaaagagaatgggcaagcaggatgaaggtgaagatcca
ctagaaaaaggactgcttgaaaaacagctagggattctctatgggagtagtcaagacctt
gctgaggaagtggagcaagttgcaactggtggatacacacttgagccagaaaagatggtt
gtccctgtggaaattgttaaagacatgttgctgcattcttcccccaaccagaatcgccga
acctcacagtaa
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