KEGG   Oryzias latipes (Japanese medaka): 101171056
Entry
101171056         CDS       T02443                                 
Name
(RefSeq) lysine-specific demethylase 2A isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ola00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    101171056
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ola03000]
    101171056
   04121 Ubiquitin system [BR:ola04121]
    101171056
   03036 Chromosome and associated proteins [BR:ola03036]
    101171056
Enzymes [BR:ola01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     101171056
Transcription factors [BR:ola03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    101171056
Ubiquitin system [BR:ola04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     101171056
Chromosome and associated proteins [BR:ola03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    101171056
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     101171056
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like JmjC F-box JHD Cupin_8 PHD LRR_4 C1_1 LRR_RPS2 LRR_Zer-1
Other DBs
NCBI-GeneID: 101171056
NCBI-ProteinID: XP_011477022
LinkDB
Position
1:complement(27610278..27633483)
AA seq 1244 aa
MEDFQPRCSTRLRAGTRRRYHDDGISDEEIDGRRMFDLEEKVTSQRFTSDKILRMEGKDF
SYEYVQKEGLRDPIVFEKPAGLGLRMPDLDFSVNDVKLFVGSRRMIDVMDVSTQKGTEMS
MAQWTRYYETPPSQREKLYNVISLEFSHTKLDSLVQRPTTVDLIDWVDNMWPRHLKERQR
DSTNSISDMQYPKVQKYCLMSVQGCYTDFHIDFGGTSVWYHILRGSKVFWLIPPTHPNLE
LYENWVLSGKQGDIFLGDRVSNCQRIELKQGWTLIIPSGWIHAVYTPVDSMVFGGNFLHS
FNIPMQLNICNIEDRTRVTLQPEEVPVKFRYPFFYEMCWYVLERYVYCLTRTSYLTPEFQ
KYSLSIGLKKSPSGSSEQEQGGSKDQESLGQQTNGKVCLTPLELEGLWNLLGKLEALPSN
KKCIPAGIQNASALVTHIKMLLKEHASDDPNLSYTGKPIITWPKRPSWYQPPPAPSPPAR
PKLASTPIIQRPQKPASSMSVLRRRRVRCKRCEACVRPECGDCNFCRDMKKFGGPGKLKQ
TCVLRQCLSPGLPLSAVCEICKEPNQEEAGDPALTLMECSNCAQIVHPACLTIQGEGVVN
RDLPSCWECPKCVQGITEQESKEERGDGFSGKRKASSLLDARMAKIYRQQLHSRDGEDSA
SEDEYDASQRRRMVLSTHGGSQSSRRGFGAYKRGLLRGASSHRGSRGMVNSSNLLKLRRG
AGGREMGRRGRGVRLRGGSRMQRRGDDSDESEEDDEDDDDDDDDDDDDEEEEEEEEEEED
ADSDENKERVHRHHRRRRRTDYDEDEDDDSEGQDFDPEEEEMDTVEDEDGDEEGDEDRWD
SDPEPPVLLVSDLNDELLKGSYLTVTLQHPHKTKKHSGSIVPKLEAALGVRTSSGSQQSF
IQRKAALSKPLRLQADSPTPRGPGRPRLRGPQRDKRVSQWASSSEEEDAPAQLPSSTLSS
PSLLSLPSFKDAGSEKGGEKEVWLSVFLYLSRAELLACMTVCKAWYKWTCDKRLWNHIDV
SRCSPLSNQALAGIVKRQPTSLDLSWTPLARRQLNCLLTRLPGLRELRLAGLPWSCLSAL
VSPTLPQLRLLDLRWCEGIKDSQMKEIITPPGLESSRSRLRNIETLRLSGLDISESTLRL
LQRHMPQLQRLDLAHCKDMTDSCITMLAAAGSHSRHHLTELTLAGCNQLTDSCLSSLKRL
SSLTLLDLRGCQGVGRRACDVFISDLSHIALYCMMEEKLIQRLD
NT seq 3735 nt   +upstreamnt  +downstreamnt
atggaggatttccagccgcggtgcagcacgagattgcgggcgggaactcggcggcgttac
catgatgatggcatttcagacgaggagattgatggaaggagaatgtttgacctggaagaa
aaggtcaccagtcagaggtttacttctgacaaaattctacgtatggagggtaaagatttt
tcatacgagtatgttcagaaggaaggcctgagggaccctatcgtttttgagaagcctgca
ggtttgggactcaggatgccagacctggacttcagtgtcaacgatgtaaagctgtttgta
gggagcagacgtatgattgacgtgatggatgtgagcacccaaaagggcactgagatgtcc
atggcccagtggacgcggtattacgagacccctccctcccagagagagaagctgtataat
gtcatcagtctggagttcagccacaccaagctggacagcctagtccagagacctaccact
gtggatcttattgattgggtggacaatatgtggcctcgtcatctaaaagagaggcagagg
gactcgacaaattccatcagcgacatgcagtatcccaaagttcaaaaatactgtctgatg
agcgtccagggctgctacactgactttcacattgattttgggggcacttcagtctggtac
cacatattaagggggagtaaggtattttggctgatcccacccacccatcccaacttggag
ctgtatgagaactgggttttgtccgggaagcaaggagacatctttttgggagacagagtg
tcaaattgtcagaggattgagctgaaacagggctggaccttgattattccatcaggttgg
attcatgctgtgtacactcctgtggattccatggtgtttggaggaaactttttgcacagc
tttaacattcccatgcagctgaacatttgtaacatcgaggacagaacacgggtaactcta
caaccagaagaggttccagtcaagttccgctatcccttcttttatgaaatgtgctggtac
gtgttggaacgctacgtctactgcctgactcggacttcctacctcacacctgagtttcag
aaatactccctgagcatcggtcttaagaagagcccatctggatcgagtgaacaggagcag
ggtggcagcaaggaccaggaatcattgggacagcaaacgaacggcaaagtttgcttgact
cctttggagctggaggggttgtggaaccttctgggtaaactggaggcactgccctctaac
aagaagtgcattccagctggaattcagaacgcctctgcacttgttactcatatcaagatg
ctgctaaaggaacatgccagtgatgatcctaacctgtcctacacgggaaagcccatcatc
acctggccaaagaggccctcgtggtatcagcctccacccgctccatctccgcctgctcgg
cctaaactggcctctacgcccatcatccagagaccgcagaagcctgcatcctccatgtcg
gtgctaaggcgacgcagagtcaggtgtaagcgctgtgaggcctgtgtgagacctgagtgt
ggagactgcaacttctgcagagacatgaagaagtttggaggtccagggaagctcaagcag
acctgtgtgctgcgccagtgtctgtctccgggcctgcctttgtctgcagtctgtgagatc
tgcaaggagcccaaccaggaggaagccggagacccggccctcactctgatggagtgctcc
aactgtgcacagatcgtccatcctgcctgcctcacgattcagggagaaggagtggtgaac
cgagacctgcccagttgctgggaatgtccaaaatgtgtccaggggatcactgagcaggag
tctaaggaagagcggggcgatggcttttcagggaagaggaaagcttcatccttgctggat
gcacgcatggccaagatttacagacagcaacttcacagccgtgacggcgaagactcagcc
agcgaggacgaatacgacgcatctcagaggaggaggatggttctgtccactcacggtggg
agccagtcctccagaaggggctttggggcctacaagagaggcctgctgagaggagcctcc
tcccacagaggcagcagagggatggtcaactccagcaacctcctgaaactcaggaggggg
gcgggggggagggagatgggacgcagagggagaggggtgaggctgcgaggaggttccagg
atgcagcgcagaggagatgattcagacgagtcagaggaggacgacgaagacgacgatgat
gacgatgatgatgatgatgatgatgaggaagaagaggaggaggaggaagaggaggaagac
gctgacagtgatgaaaacaaagaacgggttcaccgtcatcacaggaggcgtcgaaggaca
gactatgatgaagatgaagacgatgacagtgagggacaggactttgacccggaggaggaa
gaaatggacacagtggaagatgaagacggagacgaagagggagatgaagaccgctgggat
tcagacccagaaccccccgtcctcctggtgtctgacctaaacgatgagctgctaaagggc
tcctacctgactgtcaccctgcagcacccgcacaagaccaagaagcattctggttccatt
gttccgaagctggaagcagctctgggtgtgcggacatcgtctggatcccagcagagcttc
atacagaggaaggctgctctgtccaaaccactgcgcctccaagcagacagccccacccca
agaggacccggcaggcctcgtctacgtggtccccaaagggacaaaagagtttcacagtgg
gcctcttcttcagaggaggaggatgctccggctcagctgccatcgtccaccctgtcctcc
ccgtccctgttatctctgccttcgttcaaagacgccggcagtgagaaaggaggcgagaag
gaggtttggctgtcggtgtttctgtacctgagcagagctgagctgctggcctgcatgact
gtctgcaaggcctggtacaaatggacttgtgacaaacgcctgtggaaccacattgatgtg
agtcgctgcagtcctctcagtaaccaggccttggcaggcatcgtcaaacgccagccaacg
tctttggacctttcctggacccctctggccaggaggcagctgaattgcttgctcaccagg
ttgccaggtctgcgagagctgaggctggcgggtctgccgtggtcttgtctttccgctctg
gtttcacccactctgccccagctgaggctgctggatcttcgctggtgtgagggcatcaaa
gattcccaaatgaaagaaatcatcacccctcctggtctggagtcgtcccggagcaggctg
aggaacattgagacgctgcgtctatctggcctggatatcagcgagtccacactcaggttg
ctgcagcgccacatgccccagctccaaaggttggacctggcccactgcaaggacatgaca
gactcctgcatcaccatgctggcagctgctggcagccatagtcgccatcatctcaccgaa
ctcacgctggcaggttgtaaccagctgacggacagctgtctgtcttctctgaagcgactc
tcctccctcacactgctagacctccggggctgtcagggtgtgggcaggcgtgcctgtgac
gtcttcatctctgacctgtctcacattgccctttactgcatgatggaagagaagctcatt
cagcgcctggactga

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