KEGG   Oryzias latipes (Japanese medaka): 101171139
Entry
101171139         CDS       T02443                                 
Name
(RefSeq) platelet-derived growth factor subunit A-like
  KO
K04359  platelet-derived growth factor subunit A
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola04010  MAPK signaling pathway
ola04020  Calcium signaling pathway
ola04510  Focal adhesion
ola04540  Gap junction
ola04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:ola00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    101171139
   04020 Calcium signaling pathway
    101171139
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    101171139
   04540 Gap junction
    101171139
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    101171139
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:ola04052]
    101171139
   00536 Glycosaminoglycan binding proteins [BR:ola00536]
    101171139
Cytokines and neuropeptides [BR:ola04052]
 Cytokines
  Growth factors (RTK binding)
   101171139
Glycosaminoglycan binding proteins [BR:ola00536]
 Heparan sulfate / Heparin
  Growth factors/receptors
   101171139
SSDB
Motif
Pfam: PDGF_N PDGF
Other DBs
NCBI-GeneID: 101171139
NCBI-ProteinID: XP_011476545
UniProt: H2M3P0
LinkDB
Position
1:complement(24246007..24263307)
AA seq 199 aa
MRPVVYHLLAGCLCLLRTAAEKYPLPEELLERLSRSEIRSISDLQRLIEINSVENEVIEE
TKQSFHKDFSHSFPDQKKNHSHTRQRRSTVVEEALPAVCKVRTTIYEIPRSQVDPTSANF
IIWPPCVEVKRCTGCCNTSNMRCQVARKHYRTVKVAKVEYIRRRPKLREVHVKLEDHVEC
MCINKLFINSNTDTDNGIR
NT seq 600 nt   +upstreamnt  +downstreamnt
atgagacccgtggtctatcacctcctcgccggctgtctatgcctgttacgaaccgctgcc
gagaagtaccccctccctgaggagctgctggagcgactgtcccgcagcgagatccgaagc
atcagcgacctccagcggttgatagagataaactccgtagagaacgaggtgatcgaggag
accaaacagagcttccacaaggacttctctcacagttttcctgatcagaaaaaaaatcac
tcacacacaagacaaagaagaagcaccgtggtagaagaggccttacctgcagtttgcaaa
gtgcgcacaaccatttatgagattcccagaagccaagtggatcccacttcagccaacttc
atcatttggcctccctgtgtggaggtgaagcgctgcactggctgctgcaacacaagcaac
atgagatgccaggtggcgcgcaaacactaccgtacagtgaaggtggcaaaggtggagtac
atacggcggcggccaaagctgagggaggtgcatgtgaagctggaggatcacgtagagtgc
atgtgcataaacaaacttttcatcaactccaacacagacacagacaatggtatcaggtga

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