Oryzias latipes (Japanese medaka): 101171649
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Entry
101171649 CDS
T02443
Symbol
fbn1
Name
(RefSeq) fibrillin-1 isoform X1
KO
K06825
fibrillin 1
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04350
TGF-beta signaling pathway
ola04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
101171649 (fbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101171649 (fbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ola00536
]
101171649 (fbn1)
Glycosaminoglycan binding proteins [BR:
ola00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101171649 (fbn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
EGF
hEGF
TB
FXa_inhibition
EGF_3
Fibrillin_U_N
Plasmod_Pvs28
EGF_FBN_1st
Motif
Other DBs
NCBI-GeneID:
101171649
NCBI-ProteinID:
XP_023808941
LinkDB
All DBs
Position
3:12964031..13030877
Genome browser
AA seq
2985 aa
AA seq
DB search
MSTTRLQKLQCASVYYSCSARGLSDFSSFPQLCLSAFIQLYLQVKGQEPSVGSFANLLLG
RQALTPDHRGQTGRGKLNCVVLSAGVAHMWVDMRDSARGERLPQLAVALLAVLSLFAGLG
DPAEVVDTEDREAVTKITDTRANRAKRRGGTDVLRGPNVCGSRNNAFCCPGWKTLTGGNQ
CIVPICRSMCGDGFCSRPNLCTCPNGQIAPTCGSKSVQNCNIRCMNGGSCAEDHCLCQKG
YVGNHCGQPVCENGCLNGGRCVAPNRCVCTYGFTGAQCERDYRTGPCFASVNNQMCQGQL
SGIVCTKTLCCATVGRAWGHPCEMCPAQPHPCRRGFIPNHRTGACQDVDECHAIPGICQG
GNCINTVGSFECKCPAGHKFNEISQKCEDLDECSNIPGLCGVGECSNTVGSYFCKCPQGY
YTSVDGSRCIDGRGGYCYASLLNGRCANQNSQLLTKMQCCCDSGRCWSDGSTPEMCPIRG
TEAYQRLCIQIPDNDEAVVFPGRGPRPEVPNIYPVPRPDRPEIYGPPPIPERERIPDYIP
EQTPIQPPPHVPTIIQTQNISNPCQFYRNLCLNGRCVPLPGGTYRCECNMGFKLDRRGEC
IDDDECERNPCAHGECVNTPGSYICQCPAGFQSTATRTECRDLDECVANGRICNNGRCVN
TEGSFHCVCNAGFEITADGKNCQDQDECLIRNMCLNGLCINEDGSFKCICKSGFLLDTSG
RMCVDIDECETPGMCMNGHCVNTEGSFRCECMAGMAVGLDGRVCVDTHMRSTCYGGYNRG
QCVRPLFGVVTKSECCCASTEYAYGEPCQPCPRESSAEFQALCPSGSGTAGDGRDINECA
LDPDICQNGVCENMQRTYKCTCNTGFEVDLSGRNCVDINECMMNSLLCDNGLCRNTPGSF
TCQCFKGFRFDPETDVCEDINECESNPCINGDCVNSQGSFVCTCSAASSLDSTGLECIET
VKSTCWLKMVNNRCEVNINGATLKSHCCATLGEAWNSPCAKCEKDPICGKGFARVKGNVC
EDVDECQVFPGVCINGKCVNTQGSFFCQCPPGMTVDVSGRTCIDLRTEHCYLTHDDERCG
TPIPGRHRVDACCCSVGVAWGPECDECPENGTPEFAQLCPRGPGFSHRGDFINGRPFLKD
INECRMINTLCSNGRCRNTIGSFRCRCDNGFALDADERNCTDIDECRISPDLCGQGTCVN
TPGDFECNCFEGFESGFMMMKNCMDIDECERNPQLCRGGECVNTEGSFQCICPPGHEITP
DGSACQDINECDLSDRLCRNGQCVNMVGSYYCNCNTGYKSTEDLVNCVDIDECTIENGGC
ETFCTNSEGSYECSCHNGYALMPDQRSCIDIDECEENPSTCDGGQCTNIPGTYQCLCFDG
FMSSEDMKSCLDVDECELNSNICLSGNCENTKGSFICHCDLGYSVRKGTTGCTDINECEI
GAHNCDRQATCTNTAGSFKCNCAPGWIGNGLKCTDLDECSNGTHSCNNNAECQNTMGSYR
CVCKEGYFGDGFFCSDSDECAENSDLCENGHCLNLPGGFRCECDMGFITTADGKACEDID
ECIFADICVNGRCQNLPGLFRCECNIGYERDTSGGNCTDINECADPTTCINGICVNIPGT
YLCNCPPDFELNPTGVGCVDIRSGSCYLNVLARGDASENYVCSQEIGVGVSKASCCCSEG
AGWGSPCEACPHVNSTGYKTLCPGGEGFRPNPITVILEDINECQELPGLCQGGQCINTFG
SFQCECPRGFSLNLDTRVCEDINECEHPGICGPGQCYNTIGNYTCICPADYMPVNGGNNC
MDMRKSYCYRNFYLDNGTCDGELTFNMTKKMCCCSYNIGRAWNKPCEQCPVPSTDEFAIL
CGSERPGYYIDITTGRVIDIDECREIPGVCENGVCINMIGSFRCECPIGFIYNDKLLICE
DIDECQNGPVCQQNANCLNMPGSFRCECEHGFRFTPTGQCLDRNECNENPGICNPGQCID
ILGSYRCVCPNGYKTTRDQSMCVDVDECERQPCGNGTCKNTLGSYNCLCYPGFQNSHNGD
CIDVDECSTQRGLCRNGNCRNIVGSFLCVCNDGYELTLDGRVCTDINECAVNPGTCGAGT
CVNMDGSYRCICPPGYYLHEETCEDIDECSQSPEICTFGTCSNTEGSFTCQCPEGFQLSA
SGRRCLDIRVNYCFTKFENGRCLVPKPQNISKEACCCTRMPGQGWGDPCELCPAKDQEAY
RVLCPNEGYERGKDDNPTDINECLNNPCVNGQCINTDGSFRCECPIGYNLDTSGVTCIDI
NECDIGNPCGNGTCTNAIGGFECTCDEGFEPGPMMSCEDINECSQNPLLCAFRCVNVVGS
YECKCPTGYVLREDRRMCKDQNECEDGIDDCASRGMTCKNLIGTYMCICSPGYTRHPSGD
GCIDLNECATKPGICRNGRCENTVGSYRCKCDQGFVANPTQTECIDNREDFCYTEVLTTL
CQMSSSNRNLVTKSECCCDGGRGWGINCELCPLPGTSQYKKMCPLGPGYTTDGRDIDECR
VMGNLCKNGQCVNTKGSYKCICIPGYTTDITSTQCVDIDECIQAPKPCNFICKNTEGSYL
CSCPRGYILQEDGKSCRDLDECSTKQHNCQFLCINTIGGFTCKCPPGFTQHHSACIDNNE
CSSDPNLCGSNGVCQNTPGSFNCECQRGFSLDSNGQTCEDMDECDGNHRCQHGCQNLVGG
YRCSCPQGYLQHYQWNQCVDENECLNTQICGGASCHNTLGSFRCLCPSGFDYEQTSGGCA
DINECSTTQNPCKFGCSNTDGGYLCGCPPGYLRAGQGHCVTGVGFTSGSPNGELGSEMDD
NSLSPEACYECKINGYPKKGRKRRSSNSTEEEPHEEMQQLTEVVSLASLDIEDTLRFHLN
ISDVSSRDHILELTPALSTLSDHVRYSIDSGNKQGFFRINQREGVSYLHFSKKAAPLPGT
YHLQISSIPLYGKTELAKLEDQHDKDYLTGQLGDILMMRVQLVLH
NT seq
8958 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgaccagactgcaaaagttacaatgcgcatctgtttattatagctgctcagcg
agaggcttgagtgacttttcctcttttccacagctttgcctctcagcgtttattcagctg
tacctgcaagtcaaaggacaggagccctcggtcgggtcctttgcaaatctcctgctcggg
agacaagctctgactccagaccacagaggtcagacgggtcggggaaaacttaattgtgtt
gttctgagcgctggagttgcacacatgtgggtggacatgcgggacagcgcgcgcggagaa
cggctgccgcagctggccgttgctttgctggctgtgctgtcgctctttgctgggcttgga
gaccctgctgaggtggtggacaccgaggacagggaggcggtgaccaagattaccgacact
agagccaaccgggcaaagaggaggggaggaacagacgtcctgagagggccaaatgtttgt
ggctcgaggaacaatgccttctgctgcccaggctggaagactcttactggagggaaccag
tgcattgttccaatatgccgaagtatgtgtggcgatggtttctgctcaagacctaattta
tgcacctgccccaatggccagattgcccctacctgtggatccaaatcagtccagaactgt
aacattcggtgtatgaatggaggatcatgtgcggaggaccactgcctgtgccaaaaagga
tatgtaggaaaccactgtggacagccggtctgtgaaaatggttgtctcaatggaggaagg
tgtgttgctcccaacagatgcgtgtgtacatacggcttcaccggggcccagtgtgagaga
gattaccgcactggtccgtgctttgcctctgtgaataaccagatgtgccaaggccagctc
tcaggcattgtgtgcacaaagacattatgttgtgccactgtgggacgagcgtggggtcac
ccttgcgagatgtgtccagcccagcctcacccctgcagaagagggttcatacccaaccac
cgcaccggggcttgccaagatgtggatgagtgccacgccattcctggcatctgtcaagga
gggaactgcatcaacacagtgggatcctttgaatgtaaatgccctgctgggcacaagttc
aatgagatctcacagaaatgtgaagatctggatgagtgctcaaacatcccaggtctctgt
ggagtgggtgaatgctccaatactgttggcagctatttctgcaagtgtcctcaggggtat
tacacttctgttgatggatctagatgtatagacggccgtggcggatactgctacgccagc
ctactgaatgggcgctgtgccaaccagaattctcagctgctgactaaaatgcagtgttgt
tgcgacagtggacgttgctggtctgacggctctacccctgagatgtgccccattcgtgga
acagaggcataccagaggctgtgcattcagatacctgataacgatgaagcagttgtgttc
cctggtcgtggtccaaggccggaagtgcccaatatctatccggttcctcgtccagatcgg
ccagagatttatggaccccctccaatcccggagagggaacggatccctgattatattcct
gagcaaactcctatacagccacccccacacgttcctactataatccaaacacaaaatata
agcaacccatgccagttctaccgaaacctctgcctgaatggcaggtgtgtcccattgccg
ggaggcacatatcgctgtgagtgcaacatgggcttcaagttggatagaaggggcgaatgc
attgatgatgatgagtgtgagagaaacccatgtgcacatggagaatgtgtgaacacccct
gggtcttacatctgtcaatgtcctgccggcttccagtcaactgcgaccaggacggagtgc
cgggatctggatgagtgtgtggccaatggtcggatctgcaacaacggccgctgtgtgaac
actgaggggagcttccactgtgtctgcaatgctgggtttgaaattacagcagatggaaaa
aattgtcaagaccaggacgagtgtctgatcagaaacatgtgcctcaatggactgtgcata
aatgaagatggcagctttaaatgcatctgtaaatctggattcctgcttgacaccagtgga
cgcatgtgtgtagacatcgatgagtgcgagaccccaggcatgtgtatgaacggacactgc
gtcaacacagagggctcgttccgctgcgagtgtatggccgggatggcggtgggcctggat
ggacgagtctgtgttgacacacatatgcggagtacttgttatggcggctacaatcgaggg
cagtgtgttaggcctttgtttggagttgtgaccaagtcagagtgctgctgtgcaagcaca
gagtatgcctacggagagccctgccagccctgcccccgagaaagctcggctgagttccag
gctctgtgccccagtggctctggcacagccggcgatggaagagacattaatgaatgtgcc
ctggaccctgacatttgccagaatggagtgtgtgagaacatgcagcgcacatacaaatgc
acctgcaacacaggctttgaggtggacctctcaggaagaaactgtgttgacattaatgag
tgtatgatgaacagcctgctctgtgacaacggtctgtgcaggaacacgccgggaagcttc
acctgccagtgcttcaaaggattccgatttgatccggaaacggacgtctgcgaggatata
aatgaatgtgagtcaaacccttgcatcaacggggactgcgtgaacagccaaggctccttt
gtgtgtacttgttcagcagccagttctttagacagcactggattagagtgcatagagaca
gtaaagagcacctgctggctaaagatggtgaataatcgctgtgaggtcaacatcaatgga
gccacgctcaagtctcactgctgcgccacactgggagaagcctggaacagtccgtgcgcc
aaatgtgaaaaagatccaatctgtggtaaaggttttgctagagtcaaaggaaatgtctgt
gaggatgtggacgagtgtcaggtgtttcccggagtttgcatcaatggcaagtgtgtaaac
acacaaggttcctttttctgccagtgcccccctgggatgaccgttgatgtcagcggaaga
acttgcattgacctgcgcacagagcattgttatctgacccatgacgatgagcgctgtgga
acacccataccagggaggcaccgtgtggacgcctgctgctgctcagttggagttgcctgg
ggtcccgagtgtgatgaatgtccagaaaatggcactccggaatttgcccagctttgccca
cgtggcccaggcttctcacacaggggggacttcatcaacggcagacctttcctcaaagac
ataaatgaatgcaggatgatcaacaccctgtgctccaatgggaggtgccggaacaccatt
ggcagcttccgatgtcgctgcgacaatggtttcgctctggatgcagatgagaggaactgt
actgacattgacgagtgccgcatctctccggacctgtgcggacagggcacgtgtgtcaac
acaccaggagatttcgagtgcaattgcttcgaaggtttcgagagtggtttcatgatgatg
aaaaactgcatggacatcgatgaatgtgagaggaaccctcagttgtgtcgtggaggtgaa
tgtgtaaacacggaaggcagctttcagtgcatttgccccccaggacatgagatcacccct
gatgggtcagcctgtcaagacatcaatgaatgtgacttgagcgacaggctgtgcaggaat
ggtcagtgtgtcaacatggttgggagctattactgcaactgtaacacaggatacaaatct
accgaggatttggtgaattgtgttgacatcgatgagtgtacgattgagaatggtggatgt
gagactttttgcaccaactcagagggcagctatgagtgcagctgccacaacggatatgct
ttgatgcctgatcaaagaagctgcattgatattgatgaatgtgaggagaacccaagcacc
tgcgatgggggccagtgcaccaacatcccagggacttaccaatgcctgtgctttgacggc
ttcatgtcatctgaggatatgaagtcgtgcctggatgtggatgagtgtgagttgaactca
aacatctgtctgagtgggaactgcgagaacaccaagggttccttcatctgccactgtgac
ctgggctactctgtgcgtaagggaaccacaggctgcacagacatcaacgaatgtgagatt
ggagcccataactgtgacagacaagcaacttgcaccaacacagcgggcagctttaagtgc
aactgtgctccaggttggattggtaatggcctcaagtgcacagacctggatgagtgctcg
aatggcacacactcatgcaacaacaatgcagaatgtcagaacaccatgggctcctatcgc
tgtgtgtgcaaggaggggtactttggagatggattcttctgctcagacagcgatgagtgt
gcagaaaacagcgacctgtgtgaaaatggccactgtctgaatctacccggaggtttcaga
tgtgaatgtgacatgggcttcatcaccacggctgatggcaaagcctgcgaggacatagat
gaatgcatcttcgcagacatctgtgtcaatggacgctgccagaacctcccaggacttttc
agatgtgaatgcaacattggttatgaacgagacacgagtggaggcaactgcacagatata
aatgaatgtgcagacccaaccacctgcattaatggaatctgtgtcaacatcccgggaact
tacctttgtaactgcccacccgattttgaactcaaccccacaggagtgggctgtgtagac
attcgctctgggagctgctacctgaacgttctcgctcggggagatgcatcagagaattat
gtctgctcccaagagattggagttggagtttccaaggcatcctgctgctgctctgagggc
gctggctggggatctccatgcgaagcatgtcctcatgttaactcaactgggtacaagacg
ctgtgtcctggaggagaaggcttcagacccaaccccattactgtcatactggaagacatc
aatgagtgtcaggaactgccgggactgtgccagggcgggcagtgcatcaacaccttcggt
agcttccagtgtgaatgcccccgaggcttttccctcaacctggacaccagagtgtgtgaa
gatattaatgaatgtgaacatccaggaatttgtggtccaggccagtgctacaacaccatc
ggaaattacacctgcatctgccctgctgactacatgcccgtcaatggagggaacaactgc
atggacatgaggaagagctactgctacagaaacttttacttggacaatgggacatgcgat
ggggagctcacttttaacatgaccaaaaaaatgtgctgttgctcctacaacatcggacgt
gcttggaacaaaccatgtgaacagtgtcccgttcccagcactgatgaatttgcgatcttg
tgtggcagtgaaagacccgggtattatatcgacatcacaactggacgggtcattgacatc
gatgagtgcagggagatcccaggagtgtgtgagaatggagtgtgcatcaacatgattggc
agcttcagatgcgagtgtcccattggcttcatctacaatgataaactgctaatttgtgaa
gatattgatgagtgtcagaatggtccggtgtgccaacaaaatgcaaactgtttgaatatg
cccggaagcttccgttgcgagtgtgaacatggatttcgtttcacccccactgggcagtgt
ctagatcgtaatgagtgcaatgagaaccctggcatctgcaaccccgggcagtgcattgac
atactaggaagctatcgctgcgtctgccccaatggctacaaaacaaccagggaccagtcc
atgtgtgttgatgtggacgagtgcgagaggcagccgtgtggaaatggaacatgtaagaac
accctgggatcctacaactgtctgtgttaccctggctttcagaactcgcacaacggtgac
tgcatagatgttgatgagtgttcgactcagaggggcttgtgtcgaaatggcaactgcagg
aacattgtgggaagtttcctgtgtgtgtgcaatgatggctatgagctgacattagatggc
agagtttgtacagatatcaacgaatgtgcagtgaatccaggcacatgtggtgcaggaact
tgtgtgaacatggatggatcttacaggtgtatctgtccaccaggctattacctgcatgaa
gaaacatgtgaagatattgacgagtgctctcagtcgcctgaaatctgcacatttggaacc
tgctccaacactgagggcagcttcacatgccagtgtcctgaaggcttccagctctctgcc
tccggacgcagatgtttagatattcgtgtgaactactgttttaccaagtttgaaaatggc
cgctgcctggtgccaaagcctcagaacatatctaaggaagcgtgctgctgcactaggatg
cctggtcaaggttggggagatccatgtgaattatgtcctgctaaagaccaggaagcatac
cgtgtactttgtcccaatgagggatatgaacgtgggaaagatgacaatccaacagacatt
aacgaatgcctcaataatccatgtgtaaatggccagtgcatcaacacagatggctccttc
cgctgtgaatgtcccataggatacaatctggataccagcggagtcacgtgtatagacata
aatgaatgtgacatcggcaatccctgcggcaatggcacgtgcaccaatgccatcggagga
tttgagtgcacatgtgatgaaggctttgagcctggaccaatgatgagttgtgaagacatc
aatgagtgctcccagaatcctttgctgtgtgccttccgctgtgtgaacgtggtgggctcg
tacgagtgtaaatgtcccacgggatatgtactccgcgaggacaggagaatgtgcaaagac
cagaatgagtgtgaggacggcatagacgactgtgccagcaggggaatgacctgcaagaac
ctgatcggcacttacatgtgcatctgttctcctggatacactcgtcatcccagtggagat
ggctgcatagacttaaatgagtgtgcaaccaagccaggaatctgtaggaatggccgctgt
gaaaacacagtgggaagctaccgctgcaaatgtgaccaaggattcgtcgctaaccccaca
cagaccgaatgtattgataaccgtgaggacttctgttacactgaagttctgaccactctg
tgtcagatgtcttccagtaacaggaacttggttaccaaatccgagtgttgctgtgatgga
ggccgaggctggggcatcaactgtgaactttgccccctgccagggacctcccagtacaag
aaaatgtgtccactgggaccaggctacaccacagatggcagagacattgacgaatgccgt
gtgatgggaaacctgtgcaaaaatggtcagtgtgtcaacaccaaaggatcgtacaaatgc
atctgcatacctggctacacaactgacatcacatccactcagtgtgtggatattgatgag
tgcatacaggcgcctaagccttgtaacttcatctgcaagaacacagaaggaagctacctt
tgttcctgccctcgaggatacatcctacaagaagatggaaagagctgcagagatctggat
gagtgctccaccaaacagcataattgccagttcttatgtattaacaccatcggtggcttc
acctgcaaatgtcctcctggattcacccaacatcatagtgcctgcattgacaacaacgaa
tgctcatcagaccccaatctgtgtggctccaacggcgtttgccagaacaccccagggagc
ttcaactgcgagtgccagcggggattttcgttggactcaaatggacaaacatgtgaagac
atggatgagtgtgatggaaaccacaggtgtcagcatggctgtcaaaacttagtgggagga
tacaggtgcagctgtccccaaggttacctacaacactaccagtggaaccagtgtgttgat
gagaatgagtgtctgaacacccagatctgtggaggagcatcgtgccacaacaccctggga
agtttccgctgcctctgcccctcaggcttcgactacgagcagacgagtggaggctgcgca
gacatcaatgagtgctccaccacgcagaacccctgcaagttcggctgctcaaatacagac
gggggctacttgtgtgggtgtcctcctggatacctccgtgcaggacaaggacactgcgtc
actggtgtgggcttcacgagtgggagccctaatggtgaactgggaagcgagatggatgac
aattcactttctccagaagcctgctatgaatgtaagatcaacggttaccccaagaaagga
cgtaagcggcgcagttccaactcaacagaagaggaacctcacgaggagatgcagcagcta
actgaggtggtcagcctagccagtctggacatcgaagacactctccgattccacctgaac
attagcgatgtcagcagccgtgatcacatccttgagctcaccccggccttgtctactctc
agcgaccacgtgcgctacagcattgactccggaaacaagcagggcttcttcagaatcaac
caaagagaaggcgtcagctacctgcatttcagcaaaaaggcggcgccgcttccggggacg
tatcaccttcagatcagcagcatacccctctacgggaagacggagctggccaaactggag
gaccaacatgacaaagactacctcacaggacagctgggagacatactgatgatgagggtg
cagctcgttctccattaa
DBGET
integrated database retrieval system
