Oryzias latipes (Japanese medaka): 101171704
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Entry
101171704 CDS
T02443
Symbol
plekhm1
Name
(RefSeq) pleckstrin homology domain-containing family M member 1 isoform X1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04140
Autophagy - animal
ola05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101171704 (plekhm1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
101171704 (plekhm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101171704 (plekhm1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ola04990
]
101171704 (plekhm1)
Membrane trafficking [BR:
ola04131
]
SNARE
SNARE associated proteins
Others
101171704 (plekhm1)
Domain-containing proteins not elsewhere classified [BR:
ola04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
101171704 (plekhm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
Motif
Other DBs
NCBI-GeneID:
101171704
NCBI-ProteinID:
XP_004080678
UniProt:
H2M7Y1
LinkDB
All DBs
Position
19:16168721..16185703
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AA seq
1068 aa
AA seq
DB search
MLATQMPDSPPEVADVKQIKEKLTQSLKALQKKYVTSDGVVTSDDGDANLLCCALEAIFI
HGIKSKFIRSEVGGWSRKGDRGPLPQPFFWNLLKSVTHSDVITELEKINFVSTDVGRCRA
WLRLALNHGLVECYLASLFREDSMLRAYYQPSAFLLNSEEREVLLSYLQGLASLTFSLSY
KSAVLNEWTTTPLALAGLCPMSKLDTFGLSLNGDYQTKTMRKESWDTVSQSSASSDCPAL
PAKGSGMLPAETTALNSSNLSLNTTGSSQLSSSLSSDSLLQGQVSRSLTGEQWSSGDLDP
HIHISTKRSSQDLLSENKESRHCSQDSMGEDSFVSSSGVDPFSENATFSDSETQGLTEPF
HHPLDQPPSYNLEPEPASLDLPSYEEQPVEHQICNGANSEAHLCPLVLSTLHEGEVFVEE
EDVKSEGGSNELVQDTTQSDTLEECTTKTQEHQSSLRSSSMVSRKSSSESLPPSDSWISA
DDIFKPHLEKITDDDEAPPAAELRSSQSPPSVVHRRQIGLSNPFRGLLKLGHLDRKGAMG
LWRDFYCELSPFEFRLYINGEERMCCENCSLLRCEDARITSPEGRFELAFPGKRLYLRAA
NHDEAEDWVDRIVEAVNKCRPAAHVDEQWEVLHPLSENGLDECTILSPSSASSSPERLLF
PFDRNGLKAGVSPQEFNWTHTLELELDALKEAILYFSTEAEPRVWTPMVFSLSLETLKGF
RVHEGKKLPRLSYPIEEIRDVVPDVSLGGPAFFKLLTIKHTIKFRAENPEEARTWRVLIR
GALDAYLESEEDGPSVDSATLWNSRNAGNLHRLVQHQLKEDGALLAHLYTVQSEKGLDSQ
NFKCADCSQQIGPSLGRGRLCEFSGQYYCDSCHIGDTSIIPSRMLHNWDLIPREVSKRAM
RVLTHIHHEPLLNLELLNPELVKHSESMAQVHNLRNRLRLLGDYLLTCRSGAYKHLQDRT
EQRTYLFESSHLYSIMDLRQIAEGYYSSFLIMLVQHATKHVLNCDLCSQRGFICQICHSD
DILFPFQFESTLRCKDCKAVFHTACKSAGRSCPRCQRMKKYLERDLQD
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgcttgccacacagatgccagactcaccaccagaagttgcggatgtcaaacagattaag
gagaagttgactcagtcactcaaggcccttcagaaaaaatatgtgacatcagacggagtg
gtcaccagcgatgatggtgatgccaacctcctctgctgtgccttggaggccatcttcatc
catgggatcaagagcaagttcattcgctccgaggttggaggctggagtagaaagggggac
agaggacccctccctcagccttttttttggaacctccttaaatcagttacccacagtgat
gtgatcacagagctggagaagatcaactttgtgagcacggatgtgggtcgctgtcgagcg
tggctgcgtctggctctaaaccacggcctggtggagtgctacctcgcatccctgtttcga
gaagactccatgctgcgggcttactatcagcccagtgcctttctcctgaactcagaagaa
cgagaagtcctcctcagctacctccagggtctggcctcactcacattcagcctgtcgtac
aaatcggctgtcctcaatgagtggaccaccactcctctagctcttgctggactctgcccc
atgtctaagctggacacgtttggcctgtctctgaacggcgactaccagaccaagaccatg
cgtaaagaatcttgggatacagtgtctcagtcttctgcttcttcagattgtccagcactg
ccggcaaaaggatcaggcatgttaccagctgaaaccactgcgcttaactcatcaaattta
agcctcaacaccactggatcctcgcagctctcctccagcctgagctccgacagcctcctg
cagggacaggtttcccgcagcctgacaggagaacagtggtcttcaggtgacctggatcca
catattcacatcagcacaaagaggtcaagccaagatttgctgtctgaaaacaaagagagc
agacactgcagtcaggactccatgggcgaagactcgtttgtctccagctcaggagtcgat
cctttctcagaaaatgccaccttcagcgatagcgagacccaaggtcttactgagccattc
catcatcctttggatcaacccccaagttataacttagagccagaaccagcatccctggat
ttgccttcctatgaagagcaacctgttgagcaccaaatctgcaatggtgctaattccgaa
gcacacttgtgcccacttgtgctttccacactccatgagggtgaggtgtttgtagaggaa
gaggacgtgaaaagtgaaggagggagcaacgagcttgtccaggacacaacgcaaagcgat
accttagaggagtgcaccaccaaaactcaagagcatcaaagttctctgcgctccagtagc
atggtcagcaggaaatcatcctcagagtcactcccaccctcggattcttggatttctgca
gatgacatctttaagcctcatttagagaagataacggatgatgacgaggcgccccctgct
gctgagctcaggtcctctcagtcccctcccagtgttgtgcatcggagacaaatagggcta
tcaaaccccttccgcggcttgctcaaacttggccacctggatcgaaaaggagctatggga
ctgtggcgtgacttctactgcgagctctcaccctttgagttccgtctgtacatcaatggg
gaggagcgcatgtgctgtgagaactgctccctcctgcggtgcgaagatgctcggatcacc
tccccagagggccgctttgagctagcttttccggggaaaagactttatctccgtgctgcc
aaccacgatgaagcggaggactgggtggaccggatagtagaagctgtcaataaatgtcgc
cccgctgcacatgttgatgagcagtgggaggtgctgcatccccttagtgagaacggcttg
gatgaatgcaccatcttatctccatcttctgcctccagcagccctgagagactgttgttt
ccctttgacagaaacggactgaaggctggagtctctccacaagaattcaattggacgcac
acccttgaattggaactggatgccctaaaagaagccatcttgtacttttccacagaagca
gagccccgtgtgtggacacccatggtcttctccctctctttggagaccttgaaaggcttc
cgagtgcatgagggaaagaagttaccccggctgtcctaccccattgaagaaatcagggac
gtcgttcctgacgtctctctgggcggaccagcctttttcaaactcttaactatcaagcac
acaatcaaatttagggcagagaacccagaagaggctcgcacttggcgagttttgatccgt
ggagcgctggatgcgtacctggagagcgaggaggatggaccgtcggttgattctgccaca
ctgtggaactctagaaatgctggcaacctgcataggctggttcaacaccagctcaaagaa
gacggcgcgttactggctcacttgtatacggttcagtcagagaaggggctggacagtcaa
aacttcaagtgtgcagactgctctcagcagatcggaccttcgctgggcagaggcagactc
tgcgagttctctggtcagtactactgcgactcctgccacattggggacaccagcatcata
ccatcgcgtatgctgcacaactgggacctcattccacgagaggtgtcaaagagagccatg
cgtgttctgacccacatacatcatgagcctctgctgaacctggagctgctaaaccctgag
ctggtgaagcattcagagtccatggcacaggtccacaacctgcgcaacaggttgcgtctg
ctgggtgattatctgctcacctgccgcagtggagcatacaaacatctccaagacagaacg
gagcagcgcacatacctgttcgagtcaagtcacctgtacagtatcatggatctacgacag
attgcagaaggctactattcaagctttctgatcatgctggtgcagcatgccactaagcat
gtgctcaactgtgacctgtgctctcagcggggcttcatttgccagatttgtcactctgat
gatatcctcttccccttccagttcgaaagcaccttgaggtgtaaagattgtaaagctgta
ttccacaccgcctgcaaatctgcgggccgctcctgtcctcgctgtcagcgaatgaagaaa
tacctggagagggatctgcaggactga
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