KEGG   Oryzias latipes (Japanese medaka): 101171743
Entry
101171743         CDS       T02443                                 
Symbol
ift122
Name
(RefSeq) intraflagellar transport protein 122 homolog
  KO
K19656  intraflagellar transport protein 122
Organism
ola  Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:ola00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:ola03037]
    101171743 (ift122)
Cilium and associated proteins [BR:ola03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   101171743 (ift122)
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_IFT122_2nd Beta-prop_EML_2 WD40_WDHD1_1st Zn_ribbon_IFT122_C WD40 Zn_ribbon_IFT122 WD40_Prp19 WD40_CDC20-Fz EIF3I WDR55 NBCH_WD40 ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_NUP159_NUP214 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd TPR_IFT80_172 Beta-prop_WDR90_POC16_2nd TPR_IF140-IFT172 Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st WDR90_beta-prop_4th TPR_GEMI5 eIF2A TPR_7 Beta-prop_Vps41 WD40_MABP1-WDR62_1st TPR_2 Beta-prop_WDR75_1st TPR_COPA_B Beta-prop_IFT140_2nd
Other DBs
NCBI-GeneID: 101171743
NCBI-ProteinID: XP_020560412
LinkDB
Position
7:complement(17169744..17191893)
AA seq 1184 aa
MWHFCPSFHTNALSVYDVAFKPDGSQLIVAAGLRVLVYDAADGANIQPLKGHKDIVYCVA
YAKDGKRFASGSADKSIIIWTSKLEGILKYTHNDSIQCVSYNPVTHQLASCSSGDFGLWS
PEQKSVNKHKVSSKITCCGWTNDGQYLALGMMNGVVSIRNKNGEEKVKIERPGGSSSPIW
SIAWNPSKDEHNDILAVADWGQKLSFYQLSGKQIGADRTLNYDPCCVSYFSKGEYIVMGG
SDKQVSLYTKDGMRLGTIGEQNSWVWTCRVKPESNCVVLGCQDGTIACYQLTFSTVHGLY
KDRYAYRDSMTDVIVQHLITEQKVRIRCRELVKKIAIYRSRLAIQLPERILIYELRSDDS
SDMHYHSKEKICQKFECNLLVVCSQHIILCQEKRLQCLSFTSVKEKEWVMESLIRYIKVI
GGPPGREGLLVGLKNGAILKIFVDNPFPITLLKLSTSVRCLDMSAYRKKLAVVDEHNTLL
VYDINSKELLFQEPNANSVAWNTQCENMLCFSGNGYLNIKASNFPVHQQKMQGFVVGYNG
SKIFCLHVYSMSAVEVPQSAPMYQYLEKKHYKEAYQIACLGVTDSDWRDLATEALEGLDF
ETAKKAFIRIRDLRYLDLISSIEERKKRGENDNELFLADVYAFQGKFHEAAKLYKRTGHE
SRALSMYTDLRMFEYAKEFVGTTDVKSSRMLMAKQADWAKSSNEPRAAAEMYLSAGEHMK
AIDIIGEHGWVDMLIDIARKLDKAEREPLTKCALHLKRLKHHGYASEIYSKMGDLKALLQ
LHVDSKNWEEALSLVEKHPQFKCDVFVPYAQWLAENDRFEEAQKAFHKAGRQDSAVKVLE
QLTHNAVVENRFSDAGYYYWMLSMQCLDIARDYEEQRDEMLTKFKRFQHLAELYHVYHSI
QRYTDEPFISDIPETLFNICRFLLNNLTKEILQGISKVKILYTLAQQSQKLGAYRLARSC
YEKLLELHIPSRFQAAIERGSMVIRAKPCHDSEDLTEAMMCYRCSNNNPLLSNQGSMCIN
CKQPFIYSASSYEVLPLVQFYLEEGISDDEALSLIDLEVPHTDQGKAQEQDMNNSELQTL
KINDDLDDEGDHPFTAKISFEQGGSTFVPVKVSRSVLRSMSRRDVLIKRWPAPLRWEYFR
SLLPDVSITMCPTCFKMFQSEDYELLVLQHNCCPYCRRPIDEPH
NT seq 3555 nt   +upstreamnt  +downstreamnt
atgtggcacttttgtcccagttttcacactaatgctttgagtgtttatgatgttgctttc
aaaccagatggaagccagctcatagtagcagcagggctccgtgtgttggtttatgacgct
gcagacggtgctaatatccagccgttaaagggacacaaagacattgtgtactgtgtggcc
tatgcaaaggatggtaaacggtttgcttcagggtcagctgacaaaagcataataatatgg
acctccaagctagagggtattttgaaatacacacacaatgattctatccagtgtgtttca
tataatccagtcactcaccaacttgcctcttgctcttctggtgacttcggtctttggtct
cctgagcagaaatctgtaaataaacacaaagtgagcagcaaaataacatgttgtggctgg
acaaatgatggacaataccttgcccttgggatgatgaatggtgtggtgagcatacggaac
aaaaacggggaggagaaggtcaagatagaacgtccaggaggctcctcttcgcctatttgg
tctattgcttggaatccctccaaggatgaacacaatgacattttggctgtagcagactgg
ggtcaaaagctctccttctaccagctcagtggaaagcagatcggagcagacaggactttg
aattatgacccgtgttgtgtcagctacttctccaagggggagtacatcgtgatgggcggc
tcggataagcaggtgtcgctctacaccaaagacggaatgcgattgggaaccattggagaa
cagaattcctgggtgtggacatgccgagttaagcccgagtccaactgtgtggtgctgggc
tgccaggatgggaccattgcttgctatcaacttactttcagtacagttcacggcctctac
aaggatcgctacgcttatagggacagtatgactgacgtcatcgtccagcacctgatcaca
gagcaaaaggtgagaattcgatgtcgtgagttggtgaagaagatcgccatctacagaagt
cgccttgccatccagctacctgagaggatcctcatctatgagctccgctccgatgactcc
tctgacatgcactaccacagcaaggagaaaatttgtcagaagtttgagtgcaacttgctg
gttgtgtgctcccagcacatcattctgtgtcaggagaagagactccagtgtctttccttc
accagcgtcaaggaaaaagaatgggtgatggagtctctaattcgctacattaaagtgatt
gggggtccaccaggcagggagggcttgcttgtgggattaaagaacggggctatcctgaag
atatttgttgacaatccatttcccatcacactgctgaagctgtcaacttccgtgcgctgt
ttggatatgagtgcctaccgcaagaaactggccgtggttgacgagcacaacactcttcta
gtgtatgacatcaacagtaaagagctcctctttcaggagcctaatgctaacagtgtagcc
tggaacacccagtgtgagaacatgctgtgcttctctgggaatggctacctcaacattaag
gcgagcaacttccccgttcaccagcagaagatgcagggctttgtcgtgggctacaacggc
tccaagatattctgcctccatgtgtattctatgtccgctgtggaagtgccccagtctgct
cctatgtatcaataccttgagaagaaacactataaagaggcctaccagattgcctgtctg
ggtgtgacagacagcgactggagagatttggcaacagaagctttggaaggacttgatttt
gaaactgcaaaaaaggcttttattagaatccgagacctacgctacctggatttgatcagc
agcattgaggagaggaagaagcggggtgagaacgacaatgagctgttcctggcagacgtc
tatgccttccaggggaaattccatgaggcagccaagctgtacaaacgcacaggccatgaa
tccagagccctcagcatgtacacagatctacgcatgtttgagtacgccaaggagtttgtg
ggaacaacagatgtaaagagctcccggatgctgatggctaaacaggcagattgggctaaa
agcagcaacgaaccccgagctgctgctgagatgtatctgtcagcaggagaacacatgaaa
gctatagacattattggagagcacggttgggtggacatgctcatcgacattgctcgtaag
ctggataaggctgagcgtgaaccactgacgaaatgtgcacttcacctcaagaggctgaaa
catcatggctatgcctcagaaatctattccaagatgggagacttgaaggctctgctccag
ctgcatgtggacagcaaaaactgggaagaggcattgtctttggtggagaagcatccccag
ttcaaatgtgacgtgtttgtgccgtacgcccagtggctggctgaaaacgaccgctttgag
gaagcacagaaagcatttcacaaggctgggcgtcaggattcggccgtgaaagtcctggag
cagcttacccacaatgcagtggtggagaacaggtttagtgatgcaggctattattactgg
atgctgtccatgcagtgtttggacattgccagagattatgaagagcagagggatgagatg
ctgacaaagtttaagcgttttcagcatctggctgagctttaccacgtctaccactccatt
cagcgttacacggatgagcctttcatttcagacattccagagaccctcttcaacatctgc
aggttcctcctgaacaacctcaccaaagaaatacttcaggggatttctaaagttaaaatc
ttgtacacgttggcgcagcagagtcagaaactgggtgcgtatagactcgccaggtcgtgc
tatgagaaactcctggagctccatatcccttcacgcttccaggcggcaatagaacgaggc
agcatggtcattcgtgccaagccctgccatgacagcgaggacctcactgaggctatgatg
tgctaccgttgctccaacaacaatccactcctgagtaaccaggggagcatgtgcatcaac
tgcaagcagccttttatttactccgcctcatcttatgaggtgctgcctttggtgcagttt
tatctagaagaaggtatcagcgatgatgaggctctgtctcttattgacctggaagttcct
cacacagatcaaggaaaagcacaggagcaggatatgaacaacagcgagctccagacttta
aagattaatgacgatttagacgatgaaggagatcatccattcacagccaaaataagcttt
gagcaagggggctctacctttgtcccggtcaaggtgagccgttcggtgctgcgctccatg
agcagaagggatgtcctgataaagcgctggcccgcgcctctcagatgggaatacttccgc
tccctgctgcctgatgttagcatcaccatgtgtcctacctgctttaagatgtttcagagt
gaggattatgaacttctcgtgcttcaacacaactgctgcccctactgtcgcagacccatc
gacgaaccgcactga

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