Oryzias latipes (Japanese medaka): 101172510
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Entry
101172510 CDS
T02443
Symbol
hmgcs1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola00280
Valine, leucine and isoleucine degradation
ola00650
Butanoate metabolism
ola00900
Terpenoid backbone biosynthesis
ola01100
Metabolic pathways
ola03320
PPAR signaling pathway
Module
ola_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
101172510 (hmgcs1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
101172510 (hmgcs1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
101172510 (hmgcs1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
101172510 (hmgcs1)
Enzymes [BR:
ola01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
101172510 (hmgcs1)
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Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
Lectin_C_term
PS_Dcarbxylase
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
101172510
NCBI-ProteinID:
XP_004075091
UniProt:
A0A3B3HHR9
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All DBs
Position
12:24777068..24787288
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AA seq
513 aa
AA seq
DB search
MPGSAQISYMGPWPKDVGIIALELYFPSHFVDQAELEQYDGVAAGKYTVGLGQARMGFCS
DREDINSLCLTVVQRLMERNGLSYDSIGRLEVGTETIIDKSKSVKTVIMQLFEDSGNTDV
EGIDTTNACYGGTAALFNAVNWVESSSWDGRFALVVAGDIAVYATGSARPTGGAGAVAML
VGPNAPLAFERGLRGTHMQHAYDFYKPDLMSEYPVVDGKLSIECYLSALDRCYSVYRNKI
HTQWQREGSDQRFSLEDFGFLVFHSPYCKLVQKSVARLMLNDFLNHPNPNTETGPFTGLD
AFRDVKPEETYFDRDVEKAFMKASADLFERKTKTSLLISNQNGNMYTPSVYGCLASVIAE
HSPSQLAGQRIGVFSYGSGFAASLYSLKVTQDHTPGSALDKLVSSLSDLGVRLDSRKKVA
PAVFSDSMKLREDTHHLASYVPRGSVDDLFPGTWYLTRVDEKHRREYSRRPLDDDLPAEP
ELVCLGAAAQHIPSPVKKMPRIPATTTAPEASS
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgcctggttcagcccagattagctacatgggaccgtggcccaaagatgtgggtatcatt
gccttggagctgtacttcccttcccattttgtggaccaagcggagctggagcagtacgac
ggtgtggctgctgggaagtacaccgtaggcttgggccaggcccgtatggggttctgctca
gaccgtgaggacatcaactctctgtgcctgaccgtcgtccagcggctcatggagaggaac
ggcttgtcctacgacagcattggccgcctagaggttggcaccgagaccatcatcgacaag
tccaagtctgtcaagacggtgataatgcagctgtttgaggactctggcaacacagacgtg
gagggcatcgacaccacaaacgcctgctacggtggaacggccgcgctcttcaacgccgta
aactgggtggagtccagctcatgggatggacgcttcgccttggtagtcgcaggggacatt
gccgtctatgccacagggagtgcccggcccacagggggcgctggtgcagtggccatgctg
gtggggcctaatgctccattagcctttgaacgaggtctgcggggaacacacatgcaacac
gcctacgacttctacaaaccagacctgatgtccgaataccctgtggtggacggcaagctg
tccatcgaatgctacctcagtgccttggatcgctgctactctgtgtaccgcaacaagatc
cacacacaatggcagagagagggttcagatcagcgcttcagtctggaagatttcggcttt
ttggtcttccactctccgtactgcaagctggtgcagaagtcggtggctcggctgatgctc
aacgacttcctgaaccatcccaaccccaacacggagaccgggcccttcaccggcctggat
gccttcagagacgtgaagccagaggaaacctacttcgacagggacgtggagaaggccttc
atgaaggccagcgcagatctgtttgagaggaagacaaagacgtctcttttgatctccaac
cagaatggaaacatgtacacgccctctgtttacggctgcctggcctccgtcattgcagag
cacagcccctcacagctggcaggacagaggattggagtcttctcctacggctcaggcttt
gctgcttctctgtattccctcaaggtcacacaggaccacaccccgggatcagctttggat
aaactggtttccagcttgagtgacctgggagtccgactggactccaggaagaaggttgcc
cctgcagtcttctctgacagcatgaagctgagagaagacactcaccacttagccagctat
gtccctcgaggctctgtggacgatctgttccccggaacgtggtacttgaccagagtggat
gaaaagcatcgcagggaatattcccgtagacctctggatgacgacctgcctgcagagcca
gagctggtttgcttgggagctgctgctcagcacatcccaagtccagtcaagaagatgcct
cgcatcccggccaccaccacagctcctgaggccagcagctag
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