KEGG   Oryzias latipes (Japanese medaka): 101172531
Entry
101172531         CDS       T02443                                 
Name
(RefSeq) sharpin
  KO
K20894  shank-associated RH domain-interacting protein
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola04217  Necroptosis
ola04621  NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:ola00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    101172531
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    101172531
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ola04121]
    101172531
Ubiquitin system [BR:ola04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   LUBAC complex
    101172531
SSDB
Motif
Pfam: Sharpin_PH zf-RanBP ubiquitin CATSPERB
Other DBs
NCBI-GeneID: 101172531
NCBI-ProteinID: XP_023821097
LinkDB
Position
17:26746962..26753642
AA seq 434 aa
MALSSGGWAPPAPISASSSQKAPVCSGPPLTACCTTVLMSVRVSVSHSGIRPLCLPGAGS
EALRLQLSMDPSRAGEFRLALRDTSGNRSVFIAEFDLRWVQYEVKSSRCHEMRLASPPHD
CIRFNFRCDREAEEWATVVMSSLREAHRVANMNTVESDSKSSDPAVEEPWSSASLPLCEE
LCLELARAIEAGDTHAASQHASSLARQKAVLTIQVSQKNYADGELSLSVVVEDVSSSCCV
TVKVFPYMTVAALKQQVFLEYGFHPRVQRWVIGQCLCTDPRSLASYGVQKDGDTAYLYLI
SARQARITRLLFQQDLESALLTPPLPPGNGHASQDWRGYSTLPSKLSQNSQSTCDRSADV
KDVPSIEKLQLNDHSNRASKTQLTEWACPSCTFINKPSRPGCEICATARPDAHSGVQQEK
VKREDRGESGFSSS
NT seq 1305 nt   +upstreamnt  +downstreamnt
atggctcttagttcgggcggctgggcgcctccagccccaatctctgcctcgtcctcccag
aaggctcctgtgtgcagcgggcctccgctgaccgcctgctgcaccacggttctcatgtcg
gtccgcgtttcggtgtcccattccgggatccgacccttgtgcctccccggagcgggaagc
gaggctctgcgcctgcagctcagcatggacccgagccgagccggagagttccgactggct
ctgagggatacgagcggaaaccgcagtgtgttcatagcagagttcgacttgcgctgggtg
caatacgaggtcaagtcgtctcgctgccacgagatgcgccttgcctctccgccgcacgac
tgcatccgcttcaacttccgctgcgaccgagaggctgaggagtgggccaccgttgtgatg
tcgtctctgagggaggcccacagagttgcaaacatgaacacggttgagtcggacagcaaa
tcgagcgaccctgcggtagaggagccgtggagttcggcctcgctgccgctctgtgaggag
ctgtgtttggagctggccagggccatcgaggcgggcgacactcacgcagcctcgcagcac
gcatcctcgctggctcgccagaaagcggtgctgaccatacaggtgtcccaaaagaactac
gccgatggagaactcagcttatctgtggtggtggaggacgtgtcgtcgtcctgctgtgtc
acagtcaaggtttttccttacatgaccgtggctgcgctgaagcaacaggtgtttctggag
tacgggttccacccccgcgtgcagcgctgggtgatcggtcagtgtttgtgcaccgacccg
cgctcgctggcctcctacggcgtgcagaaggacggcgacacggcttacctttacctgatc
tccgcccgccaagcgcgcatcacgcgtctgctgtttcagcaggacctggagagcgctctc
ctcaccccgccgctcccgccgggaaacggccacgcctcccaggactggagggggtacagc
acgctgccctcaaagctttcccagaacagccaaagtacctgtgatagatcggcagatgtc
aaagatgtccccagcattgagaaacttcagctcaacgatcacagcaacagagccagtaaa
acacagctgacagagtgggcgtgtccttcatgcacttttatcaacaaaccgtctcgtccc
ggatgtgagatttgcgctacagccaggcctgatgcgcacagcggcgtccagcaggaaaag
gtgaagcgggaagatcgcggagagtcgggtttcagcagcagctga

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