Oryzias latipes (Japanese medaka): 101172531
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Entry
101172531 CDS
T02443
Name
(RefSeq) sharpin
KO
K20894
shank-associated RH domain-interacting protein
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04217
Necroptosis
ola04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
101172531
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
101172531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
101172531
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
LUBAC complex
101172531
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Ortholog
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GFIT
Motif
Pfam:
Sharpin_PH
zf-RanBP
ubiquitin
CATSPERB
Motif
Other DBs
NCBI-GeneID:
101172531
NCBI-ProteinID:
XP_023821097
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Position
17:26746962..26753642
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AA seq
434 aa
AA seq
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MALSSGGWAPPAPISASSSQKAPVCSGPPLTACCTTVLMSVRVSVSHSGIRPLCLPGAGS
EALRLQLSMDPSRAGEFRLALRDTSGNRSVFIAEFDLRWVQYEVKSSRCHEMRLASPPHD
CIRFNFRCDREAEEWATVVMSSLREAHRVANMNTVESDSKSSDPAVEEPWSSASLPLCEE
LCLELARAIEAGDTHAASQHASSLARQKAVLTIQVSQKNYADGELSLSVVVEDVSSSCCV
TVKVFPYMTVAALKQQVFLEYGFHPRVQRWVIGQCLCTDPRSLASYGVQKDGDTAYLYLI
SARQARITRLLFQQDLESALLTPPLPPGNGHASQDWRGYSTLPSKLSQNSQSTCDRSADV
KDVPSIEKLQLNDHSNRASKTQLTEWACPSCTFINKPSRPGCEICATARPDAHSGVQQEK
VKREDRGESGFSSS
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggctcttagttcgggcggctgggcgcctccagccccaatctctgcctcgtcctcccag
aaggctcctgtgtgcagcgggcctccgctgaccgcctgctgcaccacggttctcatgtcg
gtccgcgtttcggtgtcccattccgggatccgacccttgtgcctccccggagcgggaagc
gaggctctgcgcctgcagctcagcatggacccgagccgagccggagagttccgactggct
ctgagggatacgagcggaaaccgcagtgtgttcatagcagagttcgacttgcgctgggtg
caatacgaggtcaagtcgtctcgctgccacgagatgcgccttgcctctccgccgcacgac
tgcatccgcttcaacttccgctgcgaccgagaggctgaggagtgggccaccgttgtgatg
tcgtctctgagggaggcccacagagttgcaaacatgaacacggttgagtcggacagcaaa
tcgagcgaccctgcggtagaggagccgtggagttcggcctcgctgccgctctgtgaggag
ctgtgtttggagctggccagggccatcgaggcgggcgacactcacgcagcctcgcagcac
gcatcctcgctggctcgccagaaagcggtgctgaccatacaggtgtcccaaaagaactac
gccgatggagaactcagcttatctgtggtggtggaggacgtgtcgtcgtcctgctgtgtc
acagtcaaggtttttccttacatgaccgtggctgcgctgaagcaacaggtgtttctggag
tacgggttccacccccgcgtgcagcgctgggtgatcggtcagtgtttgtgcaccgacccg
cgctcgctggcctcctacggcgtgcagaaggacggcgacacggcttacctttacctgatc
tccgcccgccaagcgcgcatcacgcgtctgctgtttcagcaggacctggagagcgctctc
ctcaccccgccgctcccgccgggaaacggccacgcctcccaggactggagggggtacagc
acgctgccctcaaagctttcccagaacagccaaagtacctgtgatagatcggcagatgtc
aaagatgtccccagcattgagaaacttcagctcaacgatcacagcaacagagccagtaaa
acacagctgacagagtgggcgtgtccttcatgcacttttatcaacaaaccgtctcgtccc
ggatgtgagatttgcgctacagccaggcctgatgcgcacagcggcgtccagcaggaaaag
gtgaagcgggaagatcgcggagagtcgggtttcagcagcagctga
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