Oryzias latipes (Japanese medaka): 101172593
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Entry
101172593 CDS
T02443
Name
(RefSeq) tumor necrosis factor-like
KO
K03156
tumor necrosis factor superfamily, member 2
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04010
MAPK signaling pathway
ola04060
Cytokine-cytokine receptor interaction
ola04150
mTOR signaling pathway
ola04210
Apoptosis
ola04217
Necroptosis
ola04350
TGF-beta signaling pathway
ola04620
Toll-like receptor signaling pathway
ola04621
NOD-like receptor signaling pathway
ola04622
RIG-I-like receptor signaling pathway
ola04625
C-type lectin receptor signaling pathway
ola04920
Adipocytokine signaling pathway
ola05132
Salmonella infection
ola05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
101172593
04350 TGF-beta signaling pathway
101172593
04150 mTOR signaling pathway
101172593
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
101172593
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
101172593
04217 Necroptosis
101172593
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
101172593
04621 NOD-like receptor signaling pathway
101172593
04622 RIG-I-like receptor signaling pathway
101172593
04625 C-type lectin receptor signaling pathway
101172593
09152 Endocrine system
04920 Adipocytokine signaling pathway
101172593
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
101172593
09171 Infectious disease: bacterial
05132 Salmonella infection
101172593
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ola04052
]
101172593
00536 Glycosaminoglycan binding proteins [BR:
ola00536
]
101172593
Cytokines and neuropeptides [BR:
ola04052
]
Cytokines
Tumor necrosis fators
101172593
Glycosaminoglycan binding proteins [BR:
ola00536
]
Heparan sulfate / Heparin
Cytokines
101172593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
NTF2_YvbJ
Motif
Other DBs
NCBI-GeneID:
101172593
NCBI-ProteinID:
XP_004074383
LinkDB
All DBs
Position
11:complement(21405939..21408732)
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AA seq
279 aa
AA seq
DB search
MVSDIIGVSPKQEAPFKRGPSRFSTQNKSEEGHRRRANQRNRLRTMEGQCSVPMIISGHT
EAEQPKSLRGKPSSRIAAVMLAVILCLATAAAAVLFFSSHTKHPEVHEDSFHLKLRQISN
VRAAIHVEGKYNPSLDTSIEWIRGVDQFHFQGGLDLDNNEIVIPRKGLYFVYSQASFEVS
CSGDASSMVQLSHTVQRWSSSYGREDDKTYRTILHSIRTACQRKESDEQDANGDWYTAVY
MGAVFNLEKGDRLRTVMKKSMLEQLEDNPGNTFFGAFAL
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggtgagtgacatcattggagtttccccaaagcaggaagctccttttaaaagaggccct
agcagattcagcacacagaacaaatcagaagaaggacacagaagaagagcgaaccagagg
aacagactcagaaccatggaaggtcaatgcagtgtcccaatgatcatcagtggccacaca
gaagcggaacaaccgaagagtctgagagggaagccaagctccaggatcgcagcggtgatg
ctggccgtcattctctgccttgccacagccgctgcagcggtactcttcttcagctcgcat
accaagcatccagaagtacacgaagactcatttcatctcaaactcaggcagatttccaac
gtgagagcagccattcatgtggaaggaaaatacaacccctccctggacacctccattgag
tggattagaggggtggatcagttccacttccaggggggtctagacctggacaacaatgag
attgtgattcctcgcaaaggcctctacttcgtttacagccaagcatcgtttgaggttagc
tgcagcggcgacgccagctccatggtccagcttagccacaccgtgcagcgctggtctagt
tcatacgggagggaagacgacaagacctatcggaccattctgcactcgatacgcacggca
tgccagaggaaagaaagcgatgagcaggatgccaatggagactggtacaccgctgtgtac
atgggggctgtgttcaacctggaaaaaggggacaggctgaggacagtgatgaagaagagc
atgctagagcagctggaggacaatccggggaacaccttcttcggtgcgtttgctttgtaa
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