KEGG   Oryzias latipes (Japanese medaka): 101172593
Entry
101172593         CDS       T02443                                 
Name
(RefSeq) tumor necrosis factor-like
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola04010  MAPK signaling pathway
ola04060  Cytokine-cytokine receptor interaction
ola04150  mTOR signaling pathway
ola04210  Apoptosis
ola04217  Necroptosis
ola04350  TGF-beta signaling pathway
ola04620  Toll-like receptor signaling pathway
ola04621  NOD-like receptor signaling pathway
ola04622  RIG-I-like receptor signaling pathway
ola04625  C-type lectin receptor signaling pathway
ola04920  Adipocytokine signaling pathway
ola05132  Salmonella infection
ola05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ola00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    101172593
   04350 TGF-beta signaling pathway
    101172593
   04150 mTOR signaling pathway
    101172593
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    101172593
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    101172593
   04217 Necroptosis
    101172593
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    101172593
   04621 NOD-like receptor signaling pathway
    101172593
   04622 RIG-I-like receptor signaling pathway
    101172593
   04625 C-type lectin receptor signaling pathway
    101172593
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    101172593
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    101172593
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    101172593
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:ola04052]
    101172593
   00536 Glycosaminoglycan binding proteins [BR:ola00536]
    101172593
Cytokines and neuropeptides [BR:ola04052]
 Cytokines
  Tumor necrosis fators
   101172593
Glycosaminoglycan binding proteins [BR:ola00536]
 Heparan sulfate / Heparin
  Cytokines
   101172593
SSDB
Motif
Pfam: TNF NTF2_YvbJ
Other DBs
NCBI-GeneID: 101172593
NCBI-ProteinID: XP_004074383
LinkDB
Position
11:complement(21405939..21408732)
AA seq 279 aa
MVSDIIGVSPKQEAPFKRGPSRFSTQNKSEEGHRRRANQRNRLRTMEGQCSVPMIISGHT
EAEQPKSLRGKPSSRIAAVMLAVILCLATAAAAVLFFSSHTKHPEVHEDSFHLKLRQISN
VRAAIHVEGKYNPSLDTSIEWIRGVDQFHFQGGLDLDNNEIVIPRKGLYFVYSQASFEVS
CSGDASSMVQLSHTVQRWSSSYGREDDKTYRTILHSIRTACQRKESDEQDANGDWYTAVY
MGAVFNLEKGDRLRTVMKKSMLEQLEDNPGNTFFGAFAL
NT seq 840 nt   +upstreamnt  +downstreamnt
atggtgagtgacatcattggagtttccccaaagcaggaagctccttttaaaagaggccct
agcagattcagcacacagaacaaatcagaagaaggacacagaagaagagcgaaccagagg
aacagactcagaaccatggaaggtcaatgcagtgtcccaatgatcatcagtggccacaca
gaagcggaacaaccgaagagtctgagagggaagccaagctccaggatcgcagcggtgatg
ctggccgtcattctctgccttgccacagccgctgcagcggtactcttcttcagctcgcat
accaagcatccagaagtacacgaagactcatttcatctcaaactcaggcagatttccaac
gtgagagcagccattcatgtggaaggaaaatacaacccctccctggacacctccattgag
tggattagaggggtggatcagttccacttccaggggggtctagacctggacaacaatgag
attgtgattcctcgcaaaggcctctacttcgtttacagccaagcatcgtttgaggttagc
tgcagcggcgacgccagctccatggtccagcttagccacaccgtgcagcgctggtctagt
tcatacgggagggaagacgacaagacctatcggaccattctgcactcgatacgcacggca
tgccagaggaaagaaagcgatgagcaggatgccaatggagactggtacaccgctgtgtac
atgggggctgtgttcaacctggaaaaaggggacaggctgaggacagtgatgaagaagagc
atgctagagcagctggaggacaatccggggaacaccttcttcggtgcgtttgctttgtaa

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