Oryzias latipes (Japanese medaka): 101172656
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Entry
101172656 CDS
T02443
Symbol
nup210
Name
(RefSeq) nuclear pore membrane glycoprotein 210 isoform X1
KO
K14314
nuclear pore complex protein Nup210
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101172656 (nup210)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
101172656 (nup210)
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101172656 (nup210)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_NUP210_8th
Ig_NUP210_3rd
Ig_NUP210_13th
Ig_NUP210_2nd
Ig_NUP210_15th
Ig_NUP210_5th
Ig_NUP210_9th
Ig_NUP210_4th
Ig_NUP210_7th
Ig_NUP210_1st
Ig_NUP210_6th
Ig_NUP210_16th
Ig_NUP210_14th
Big_2
NUP210_Ig
CHU_C
Motif
Other DBs
NCBI-GeneID:
101172656
NCBI-ProteinID:
XP_011475594
UniProt:
A0A3B3I7Z4
LinkDB
All DBs
Position
7:17519488..17551914
Genome browser
AA seq
1883 aa
AA seq
DB search
MNLFKLPFLLTAVLAVVVVDGTSKLSIPKVLLPLARGTLINFTLETTDGCYRWSSTRPEV
ASIQAADEDLSRGCSRRAVVQALSTQPSRLTSIILAEDVVTGQVLRCDAIVDVISEIQIV
STTRELHLEDSPLELKIHALDSEGNTFSTLAGLVFDWSFVKDIDVNGFPDSYNSLRVLKF
SESTYTPPAYISEMERVGKQGDIILVSGLKTGHAKLKAKIQESLYKDVGAAEVRLLILEN
ILLSPAHDIYLLAGTSIHYRVLKIRQGTITELSMPCDQYELHLQNSVAVPAGSQDAPVAS
LDQSTSTVTGLQLGHINVVLDHKSLRMQGVSRLPNSTLYVVEPGYLGFKIHPGDSWVLET
GRKYDIFIEVFDKSGNKIYLSDNIRIRTVFAEEYFEVLHSSKNGSYHYVKALKDGLTLID
ATLRAVEDDRGRVHDLTNPVHNEQDVEIYNPIVLRPSILTFPWQPKVGAYQYTIMATGGS
GNFSWTSSNTAVATMTVKGVMTTASDKGVSVVYAHDLRNPLHFGQMKVYVVEPVAMDFAP
CAVEARLGQVLDLPLRIFGLLEEFENERVMLSDCSHFELLVAEETRDVFELLDGRLAPGQ
DHCSGVRAKALSPGYTVLTVSYTHGNIHLSAKITIAAYLPLIAVDPVSVAVVTLGSSKDM
LFEDGPQPWVLEPSKFFCNLRAEDETSLSLTLISPSSHSFNHHLVRATCMALGEQVLEVT
VGNKASVTNPYPAVEHAVVKFVCAPPSRLTLLPIYSSPQLDLTCPLLQQNKQVVPVSNYR
NPILNLAAFDHQGRKFDNFSSLSLLWESTKTSLASIEPTMPMEFHLLEEGQKQMKLHGRQ
TVLVHQQTGHAAITVTALAYQVSHLTAAKVPSPYEPLMPVSAMLELLLVEDVKVSPDLVT
IYNHPNVHANLALQEGSGHFYLNTSARGIANVKFQKAQGATQVSPVHPGTVNVMVHDLCL
AFPVPAKATVHVSDILEVYVRVVDKVEIGTSVRAYVRVLDDKKKPFSASYFQFMNLKLNA
ASEIVSLKPLPESTENDTAVFWVRGVSIGQTSLSAVVMDKNGRKIASAPQQIEVFPPFKL
IPRKITLLIGAMMQITSEGGPQPQSNILFSISNEDMATVNALGHVRGVTVGNVTVTGMVQ
VVDAETGKLVIISQDQVDVEVVVLTGIRIRAPITRMKTGTQMPVYVMGMTNNQSPLSFGS
VLPGLTFHWSTTKRDVLDIQSRQIEANIDLQSEHNFGMTVVGRTRGRTGLKVVLRVTDPT
AKQLERNLLELRDEIQIQVYDKLQMLNPQVEAEEILMAPNSAIKLQTNRDGMGALSYQML
NCPDQMVVAQVDHKGFLSSGSLTGVSSLLVTSQETFGVNQTLILSVKVVPVSYFRFSTSP
VLYTLNRDHLTAFPLGVLLTFTVHFHAHTGEALHSSNSHLTFSTNRDDLVQVGIGPNNHT
ITVKTVNVGLTLLAVWDSENTGVADYVPLPVDHAIRIDDARQLVVGDVVCFDVQLASSDG
GHGVWSSSANGILQVDPKSGAAFARESGTVTVYYEIPGVLRTYREVSVEAPSRTAAIAQT
TPVRIGKETKVLLMTTEKGTNLIGTCSSTQIEAISQLQPETSVSCHLSFSSDTIDFSAND
VFKTRTDFDSSIGLYTCSLTMQPLTDQQSRVLSISMTNLLVKAGLVGAGFPVDQISARLP
LEPGLYLDQTNLLLSNLHPSAEVTVFGPVTALSNLQVFSTSPSIVVQEKEVHQGFPGFAK
YTVSAVETQAAGSATVTISSSSSGQSLILPVTLMHMSDPGAAKKAVAPQVGRTEEGSSLH
SFINSYQMMFCTLFALLAGAAIVIIVLHSFFSPREETYHPAFIQRTPQMVRDSPVANSFT
PITSRSDLSSSPRSRLYSSRYKS
NT seq
5652 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgtttaaacttccatttttgttaacggcagtattagccgtggtcgttgtggac
ggtacttctaagctaagtatcccaaaagttttactcccgctcgctagaggtacattaatc
aacttcacgttggaaaccactgacggctgttacagatggtcttccaccagaccagaagtg
gcaagcatccaggctgctgacgaggacctcagcagagggtgctcccgcagagccgttgtc
caagcactctccactcaaccctccagactcaccagcatcattctggccgaagatgttgtc
acaggtcaggtcctgcgctgtgacgctattgtcgatgtcattagtgaaatccagattgtg
tccacaaccagagagctacatctggaagattcaccactggaactcaaaattcatgcactg
gattctgaaggaaacacatttagcacgctcgcagggcttgtgtttgactggtccttcgtg
aaggatatagatgtgaatggattccctgactcttacaactcattacgggtacttaagttc
tctgagtccacatacactcctcctgcatacatatctgaaatggaacgcgttgggaaacaa
ggtgatataattctggtgtcaggactgaaaacgggacatgccaagctgaaagctaaaata
caggaatccctgtataaggatgtgggtgctgcagaagtgagactgctgatcttggagaac
atcctgcttagccctgcgcatgacatctacttgctggcaggaacttccatccattacaga
gttctgaagataagacagggcacaatcacagagctctccatgccgtgtgatcagtatgag
ctgcaccttcagaacagcgtggcggtgcctgctggaagtcaggatgctcctgtggccagt
ctggatcaaagcacatccacagtgacaggacttcagttgggacacattaatgtggtgttg
gatcacaagagccttcgaatgcagggagtgtctcgcctccctaacagcactctatatgtt
gttgaaccaggctacctaggctttaaaattcatccaggagatagttgggttcttgaaaca
ggcagaaaatatgatattttcattgaagtgtttgataaatctggcaacaaaatctatctc
tctgataatatccgcatcagaactgtttttgctgaggagtattttgaagtcctgcattcc
agtaaaaatggatcttatcattacgtcaaagccctcaaagatggcctaactcttattgat
gccacgctaagagctgtggaggatgacagaggacgggtccacgatctcaccaaccccgtt
cacaatgaacaagatgtggaaatatataaccctatagttctaagaccgagtattctcact
tttccttggcagcccaaagtgggagcttatcagtacacaataatggcgacgggtgggagt
ggaaatttcagctggacctcatccaataccgctgtcgccacaatgactgtgaaaggagtg
atgactacagccagcgacaaaggtgtcagtgtggtttatgctcacgatctccggaaccca
ctgcacttcggacaaatgaaggtgtacgttgttgagcctgttgccatggactttgctcct
tgcgcagtagaggccagattgggccaagttctggatctgcccctcaggatttttggactg
ctggaggagtttgagaacgagcgagtgatgctgagtgactgctcccactttgaactgctg
gttgcagaggagacacgagacgtctttgaactcctggatgggaggctggctccaggccag
gatcactgcagtggagtcagagccaaggccttaagtcctgggtacactgtacttaccgtc
agctacactcatggcaacattcatctcagtgccaagatcaccatagctgcatatcttcct
ctcatagcggttgatcccgtttctgtggcagtggtcacgttgggatcatctaaggacatg
ttgttcgaggatggacctcagccttgggttttagagccttcaaagttcttctgcaactta
agagctgaggatgaaaccagtctgagtcttactctcatcagtccctcgtcccacagtttt
aatcaccacttggttagagcaacctgcatggccctgggagagcaggtgctggaggtgact
gttggaaataaggccagtgtgactaatccttatcctgctgttgagcacgcagtagttaag
tttgtttgcgcccctccatcacgcctcacgctgctgccaatttatagcagcccacagctg
gacctgacctgcccactcctgcagcagaataagcaagtggtgccagtttcaaattatcgt
aaccctattctgaacttggctgcatttgatcatcaaggcagaaagtttgacaacttcagc
tcactgagtcttctgtgggaatctacaaagacctcattggccagcattgaacccacaatg
cccatggagtttcacctgctggaggaaggccaaaagcagatgaagcttcacggacgccag
acagttcttgtacatcagcaaacaggccatgctgccattactgtgacagcgcttgcatac
caggtttcacatctgactgcagcaaaggttcctagtccatatgagcccttgatgcctgtc
tcagccatgctggagctcctgctggtggaagatgtaaaggtttctcctgacttagtgacg
atatacaaccatccaaacgtgcatgccaatctggccctgcaggaaggttcggggcacttt
tatctcaataccagtgccagagggattgcaaatgtcaaattccagaaggctcaaggcgca
actcaggtttctccggttcatcctggcactgtaaatgtcatggtgcatgacttgtgctta
gcttttccagtacctgccaaagccacggttcatgtttctgatatcttggaggtttatgtg
agagtggtagacaaggtggagattggcacatctgtgagagcttatgtcagagttttggat
gataagaaaaagcccttctcagcgagctatttccagtttatgaatctcaaactcaatgct
gcttctgaaatagtctctctcaagccgttaccagagtccacagaaaatgacacagcagtt
ttttgggtgagaggagtctccattggtcagacctctctgtcagctgttgtcatggacaaa
aatggtagaaaaattgcctctgcaccacagcaaattgaggtatttccaccctttaaactc
atcccaaggaaaattactctgctaattggtgcaatgatgcagataacatctgagggtggc
cctcaacctcagtccaatatccttttctcaatctctaatgaagacatggccactgttaat
gctctgggccatgtcaggggcgttactgtcggtaacgtaacagtcacaggaatggtccag
gtggtcgatgcagagactgggaagctggtcatcatatctcaggatcaagtggacgtagag
gtggtggttttgactggcattcgcatcagagcacctattaccagaatgaaaacaggaaca
cagatgcccgtatatgtgatggggatgaccaataatcagagcccgctttctttcggtagt
gttttacctggtttaaccttccactggtccaccacaaagagagacgttctggatattcag
tctcgacaaattgaggctaacattgacctccagtcagaacacaactttggcatgactgtg
gtgggaagaactcgagggcggactggccttaaggtggttctgcgagttactgacccaaca
gcaaagcagctggagaggaacctgctagagctcagagatgagatccagatccaggtctat
gacaagctgcagatgcttaatccccaagtagaagccgaggagatattgatggctccaaac
tcggctattaaacttcaaactaacagagacggcatgggcgccctttcctatcaaatgctg
aattgccctgatcagatggttgttgctcaggttgatcataagggcttcctctcctctggt
tctctgaccggcgtctcatcactgctggttacttctcaagaaacatttggtgtcaatcag
actctcatcctctctgtgaaggtggttcccgtgtcctatttccgctttagcaccagtccg
gtgctctacactctcaacagagatcacctgactgcctttcctctgggagtgctgcttacc
tttactgttcattttcacgctcacactggagaagctcttcacagctccaactctcacctc
acgttttctacaaaccgggatgacctcgtacaggttgggattggacccaacaaccacacg
ataacggtgaaaactgtgaatgtcggtctcactcttctggcggtgtgggacagtgaaaac
acgggggtggcggactacgttccgcttcccgttgatcatgccatccgcatagatgacgct
cgccaacttgtggttggagatgtggtctgctttgatgtccagttggcgagctccgatggt
ggtcacggtgtgtggagctcttccgcaaatggcattctccaggtggaccctaaaagtggt
gcagcttttgccagagagtctgggacggtcacggtgtattatgagatacctggtgttctg
cgaacatacagagaggtatctgtggaagcccccagcaggacagctgccattgctcagacc
acacctgtcaggattggcaaagaaacaaaggttctactgatgacgacagaaaagggaacc
aacctgataggaacttgctcctccacccagattgaagcgatttcacagttgcagccagaa
acatctgtaagctgccatctcagcttttccagtgacacaatcgacttctcagctaatgat
gtcttcaagactcgcaccgactttgactccagcattggcctctacacatgctccctgacc
atgcagcctttgacagaccaacagagccgtgtgctcagcatctccatgaccaatttgctg
gtaaaggcaggcctggtgggtgctgggttccctgtggatcaaatcagcgccaggctgccc
ttagagccaggcctgtacttggaccagacgaatctgctgctctcgaacctgcacccatca
gctgaggttacagtttttggccctgtgactgcactatccaatctacaggtgttttctacg
tctcccagcattgttgtgcaggagaaggaggtccaccaggggttccctggttttgctaag
tacactgtcagtgctgtggaaactcaggcagctggttcagccacagtcaccataagcagc
tcttcttctggccagagtctcatcctgcccgttactttgatgcatatgtctgatcctggc
gcagccaaaaaagcagttgctcctcaggttggtcgtacggaggaggggtcctccctgcac
agcttcatcaacagctaccagatgatgttctgcaccttgttcgcactgcttgctggggcc
gccatcgtcatcattgtgctccactcgtttttctctccaagagaagaaacgtatcatcca
gcttttatccagagaacgccacagatggtcagagactccccggtagcgaactcctttacc
cccatcacctccagaagtgacctgagcagcagccccaggtcacgcctctactcctcccgc
tacaagtcttaa
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