KEGG   Oryzias latipes (Japanese medaka): 101173297
Entry
101173297         CDS       T02443                                 
Name
(RefSeq) rano class II histocompatibility antigen, A beta chain isoform X1
  KO
K06752  MHC class II antigen
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola04145  Phagosome
ola04514  Cell adhesion molecules
ola04672  Intestinal immune network for IgA production
ola05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ola00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    101173297
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    101173297
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    101173297
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    101173297
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ola04147]
    101173297
Exosome [BR:ola04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   101173297
  Exosomal proteins of epithelial cells
   101173297
  Exosomal proteins of breast milk
   101173297
SSDB
Motif
Pfam: C1-set C2-set_2 MHC_II_beta
Other DBs
NCBI-GeneID: 101173297
NCBI-ProteinID: XP_004069252
UniProt: R4IRR4
LinkDB
Position
5:24714903..24721359
AA seq 245 aa
MDRFLLFLGCLLPSVADYSKDQHGYFMFSDFFCYIPSRNPKEVQYLIDWYFNMELTMQYN
SSVGGWTGFTPAGLITAAKFNADKYDVVQRILERELVCQRSVEMVYNGTEEAKVEPNVSL
QTVEDNDSTLECSALDFYPKHIRLTWFSNGQEVTEGVTFSDVLPNGDWTYQAHTYLTLTP
GKQDHISCMVQHTSLKEPKIYNWEPSMNQTDRDYIIGGVCALLLGAVFLCVGLIHYKQKW
NTFAV
NT seq 738 nt   +upstreamnt  +downstreamnt
atggacagattcttgctctttctcggttgtttacttccatctgtggcagattactccaag
gatcagcatggatacttcatgttctctgacttcttttgttatataccatccagaaaccca
aaggaggtgcagtatttgattgactggtatttcaatatggagcttaccatgcagtacaac
agctcggttggggggtggaccggcttcactccagctggattgatcacagcagctaaattc
aatgccgacaaatacgatgtggttcagcgaatactggagagagaacttgtgtgtcagaga
agtgttgagatggtttacaacggaacagaggaggcaaaagttgaacccaatgtaagtctg
cagacagtggaggacaatgactcaactctcgagtgcagcgctttggatttctaccccaaa
cacatcaggctgacgtggttctccaatggacaggaagtgaccgaaggcgtgacctttagt
gatgtgctgccaaatggagattggacctatcaggcgcacacatacttgacattgacacct
ggaaagcaggatcatattagctgcatggtgcagcacaccagcctcaaagaacccaagatt
tataactgggagccgtcaatgaaccaaacggatcgcgattacatcattggtggagtctgt
gctttgcttttgggagcggtgtttctgtgtgtgggactgattcactacaaacagaaatgg
aatacatttgccgtttaa

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