Oryzias latipes (Japanese medaka): 101173297
Help
Entry
101173297 CDS
T02443
Name
(RefSeq) rano class II histocompatibility antigen, A beta chain isoform X1
KO
K06752
MHC class II antigen
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04145
Phagosome
ola04514
Cell adhesion molecules
ola04672
Intestinal immune network for IgA production
ola05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
101173297
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
101173297
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
101173297
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
101173297
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ola04147
]
101173297
Exosome [BR:
ola04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
101173297
Exosomal proteins of epithelial cells
101173297
Exosomal proteins of breast milk
101173297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
C2-set_2
MHC_II_beta
Motif
Other DBs
NCBI-GeneID:
101173297
NCBI-ProteinID:
XP_004069252
UniProt:
R4IRR4
LinkDB
All DBs
Position
5:24714903..24721359
Genome browser
AA seq
245 aa
AA seq
DB search
MDRFLLFLGCLLPSVADYSKDQHGYFMFSDFFCYIPSRNPKEVQYLIDWYFNMELTMQYN
SSVGGWTGFTPAGLITAAKFNADKYDVVQRILERELVCQRSVEMVYNGTEEAKVEPNVSL
QTVEDNDSTLECSALDFYPKHIRLTWFSNGQEVTEGVTFSDVLPNGDWTYQAHTYLTLTP
GKQDHISCMVQHTSLKEPKIYNWEPSMNQTDRDYIIGGVCALLLGAVFLCVGLIHYKQKW
NTFAV
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggacagattcttgctctttctcggttgtttacttccatctgtggcagattactccaag
gatcagcatggatacttcatgttctctgacttcttttgttatataccatccagaaaccca
aaggaggtgcagtatttgattgactggtatttcaatatggagcttaccatgcagtacaac
agctcggttggggggtggaccggcttcactccagctggattgatcacagcagctaaattc
aatgccgacaaatacgatgtggttcagcgaatactggagagagaacttgtgtgtcagaga
agtgttgagatggtttacaacggaacagaggaggcaaaagttgaacccaatgtaagtctg
cagacagtggaggacaatgactcaactctcgagtgcagcgctttggatttctaccccaaa
cacatcaggctgacgtggttctccaatggacaggaagtgaccgaaggcgtgacctttagt
gatgtgctgccaaatggagattggacctatcaggcgcacacatacttgacattgacacct
ggaaagcaggatcatattagctgcatggtgcagcacaccagcctcaaagaacccaagatt
tataactgggagccgtcaatgaaccaaacggatcgcgattacatcattggtggagtctgt
gctttgcttttgggagcggtgtttctgtgtgtgggactgattcactacaaacagaaatgg
aatacatttgccgtttaa
DBGET
integrated database retrieval system