Oryzias latipes (Japanese medaka): 101173604
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Entry
101173604 CDS
T02443
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ola04515
]
101173604
Cell adhesion molecules [BR:
ola04515
]
Cadherins
Protocadherins
101173604
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
101173604
NCBI-ProteinID:
XP_020556036
LinkDB
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Position
10:complement(14793156..14795912)
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AA seq
843 aa
AA seq
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MGNINVIALLDSNCSGTGMTKTIGYRAWGWQAFWWHHFFLLWSTIDAQTRYSIPEEVKHG
SVVGNLAKDLGLTLTEISERALRVAAESGEQYFSVDAGRGELLVNDRIDREALCGQSASC
VLPLQLVLEKPLSLHRLEVEIQDINDNPPKFYTEELFLNISESAAVGTRFPLESAEDSDV
GGNSVKSYTLTKNDFFVLKMKEVEDGKTVPELVLEKPLDREIKAVHQLRLTALDGGNPMK
SGTSTITVTVLDNNDNFPVFEKSSYRVSLLENTAKGSFVIKIAASDADEGSNGEIRFSFG
ARTPDSVLTLFEIKTLSGEIILKGDLDYERETSYKFEITAKDKGSPEMQSHCRLQIDVVD
VNDNKPEIVLTSEPQPVREDAPGGTVVALLNVRDADSGNNSKVHLQISKGSPFKLKSSFF
NNYALITSGPLDREKISDYHVEITATDSGSPPLSCKRIVSVSVTDVNDNPPVFTQRSYNV
YLKENGVPGSILFSVSASDLDSGENAKISYSILDSKVQDVSVSSYVYMNSENGSIYSMHS
FDYEKLKVFEIHVQAKDQGSPSLSSNATVHVFILDQNDNAPAVIYPSSAALGSLSHQRMP
RSAKAGHLVTKVTAVDADSGHNAWISYRLAEATDASLFTVSLYTGEVRTKRAVSEQDDSS
QRLILEIKDDGEPLQSATVTVSILLEDALHEPISELRHHKASEPSKKTGRITLYLILSLA
SVSVLSLLTFVILAVKCMRNSRSSGSCCCMRRSDSDDYKNPNRNLQIQLNTDGPIKYVEV
LGGDMMSQSQSFRSCMSPMSEYSDFTLIKPSSTTDFKEVISVLDASLPDSTWTFESQQVS
SEL
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatatcaatgtgattgccttgctggatagtaattgtagcggcactgggatgaca
aagacaataggataccgagcctggggatggcaggctttctggtggcatcatttctttctc
ctgtggagtacaatagatgcacagactcgatacagcatcccagaggaagtaaaacacgga
tcggtggttggaaacctcgcgaaagatctgggattgacgttaaccgagatttctgagcgt
gcgctacgcgttgctgctgagtctggtgagcaatattttagcgtggatgcggggagagga
gagctgctggtgaacgacagaatagacagagaggctttatgcggacaaagcgccagctgt
gtgttgcctttacagttagttcttgaaaaacctctgagtttacatcgccttgaggttgaa
attcaagatattaatgacaatcctcctaaattctatactgaggaattgtttttaaatatt
tccgaatcggctgctgtgggaactcgatttccattagagagcgcagaggactcggatgtt
ggtggaaattcagtaaaatcctacactttgacaaagaatgacttctttgtgttaaaaatg
aaagaggtcgaagacggaaaaacagtcccagagttggtgttggagaagccgcttgatcga
gaaataaaagctgttcatcagctccgtctcactgcgttagatggaggaaaccccatgaaa
tccggtacctctacaataactgtaactgtgcttgataacaatgataacttcccagtgttt
gaaaagagttcatatcgcgtttctttacttgaaaatacggcaaaaggttcgtttgtaatc
aaaatagctgcgagtgacgccgatgagggatcaaatggagaaattcggttttctttcggc
gcgcggacacctgattccgtgttaacattatttgagattaaaactctaagcggagaaatt
attttaaaaggcgatttagattacgaaagagagacgtcctacaaatttgagataactgca
aaagataaagggagtccggaaatgcaaagtcactgccgcctccagatagatgttgttgac
gtaaatgacaataaaccagaaatcgttctgacttctgaaccacagccagtgcgcgaggac
gcaccgggaggcactgtggtggcgttacttaatgtgcgcgatgcagactccggtaataac
agtaaagtgcatttacaaatatcaaaaggttctccttttaaattaaagtcatcgtttttt
aataattatgcactaataactagtggtcctttagacagagaaaaaatatcagattatcat
gtggaaataaccgctactgactctggatctcccccgctgtcttgtaaaagaattgtatct
gtcagcgtcactgacgttaatgacaatcctccagtttttacgcagcggtcttataacgtg
tatttaaaggagaacggagttccgggttctattctgttctcagtatccgcgtctgacctg
gattcaggtgaaaacgcaaagatctcttactccattctggactcgaaagtccaggacgtg
tccgtgtcctcctatgtttacatgaactcagagaacggcagcatctacagcatgcactcg
tttgactatgagaagctgaaggtgtttgagatccacgttcaggcaaaggaccagggctct
ccttctctcagcagcaacgctactgtccacgtctttattctggaccagaacgataacgcc
cccgccgtcatttacccctcctccgctgctctgggctccctctctcatcagaggatgccc
cgctccgccaaagcgggtcacctggttaccaaggtgacggcggtggacgctgactcgggc
cataacgcctggatctcctacagactggcggaggccacagacgcctctctgttcaccgtc
agtctgtacacaggagaagtgaggactaaacgcgctgtgtccgagcaggacgactcctct
cagaggctgatcctagagatcaaagacgacggagagccgctccaatccgccaccgtcacg
gtgtccatcctgctggaggacgctctccacgagcccatctcagagctgcgacaccacaaa
gcgtccgagcccagcaagaaaacgggcagaatcaccctttatttgattctgtctctggcc
tcggtgtccgtgctgtctctgctgacttttgtcatcttagcggtgaaatgcatgaggaac
agcagaagcagcggcagctgctgctgcatgagacgcagcgactcggatgattacaagaac
cccaacagaaacctgcagattcagctcaacaccgatggacctatcaagtacgtggaggtc
ctgggaggagacatgatgtctcagagtcagtccttcaggtcctgcatgtctcccatgtca
gagtacagtgatttcactctgattaaacccagcagcaccacagactttaaggaggtcatc
agtgtgctggatgcctctttacctgacagcacctggacatttgagagtcaacaggtgagc
agcgagttgtaa
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