KEGG   Oryzias latipes (Japanese medaka): 101173604
Entry
101173604         CDS       T02443                                 
Name
(RefSeq) protocadherin gamma-C5-like
  KO
K16497  protocadherin gamma subfamily C
Organism
ola  Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:ola00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ola04515]
    101173604
Cell adhesion molecules [BR:ola04515]
 Cadherins
  Protocadherins
   101173604
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2
Other DBs
NCBI-GeneID: 101173604
NCBI-ProteinID: XP_020556036
LinkDB
Position
10:complement(14793156..14795912)
AA seq 843 aa
MGNINVIALLDSNCSGTGMTKTIGYRAWGWQAFWWHHFFLLWSTIDAQTRYSIPEEVKHG
SVVGNLAKDLGLTLTEISERALRVAAESGEQYFSVDAGRGELLVNDRIDREALCGQSASC
VLPLQLVLEKPLSLHRLEVEIQDINDNPPKFYTEELFLNISESAAVGTRFPLESAEDSDV
GGNSVKSYTLTKNDFFVLKMKEVEDGKTVPELVLEKPLDREIKAVHQLRLTALDGGNPMK
SGTSTITVTVLDNNDNFPVFEKSSYRVSLLENTAKGSFVIKIAASDADEGSNGEIRFSFG
ARTPDSVLTLFEIKTLSGEIILKGDLDYERETSYKFEITAKDKGSPEMQSHCRLQIDVVD
VNDNKPEIVLTSEPQPVREDAPGGTVVALLNVRDADSGNNSKVHLQISKGSPFKLKSSFF
NNYALITSGPLDREKISDYHVEITATDSGSPPLSCKRIVSVSVTDVNDNPPVFTQRSYNV
YLKENGVPGSILFSVSASDLDSGENAKISYSILDSKVQDVSVSSYVYMNSENGSIYSMHS
FDYEKLKVFEIHVQAKDQGSPSLSSNATVHVFILDQNDNAPAVIYPSSAALGSLSHQRMP
RSAKAGHLVTKVTAVDADSGHNAWISYRLAEATDASLFTVSLYTGEVRTKRAVSEQDDSS
QRLILEIKDDGEPLQSATVTVSILLEDALHEPISELRHHKASEPSKKTGRITLYLILSLA
SVSVLSLLTFVILAVKCMRNSRSSGSCCCMRRSDSDDYKNPNRNLQIQLNTDGPIKYVEV
LGGDMMSQSQSFRSCMSPMSEYSDFTLIKPSSTTDFKEVISVLDASLPDSTWTFESQQVS
SEL
NT seq 2532 nt   +upstreamnt  +downstreamnt
atgggaaatatcaatgtgattgccttgctggatagtaattgtagcggcactgggatgaca
aagacaataggataccgagcctggggatggcaggctttctggtggcatcatttctttctc
ctgtggagtacaatagatgcacagactcgatacagcatcccagaggaagtaaaacacgga
tcggtggttggaaacctcgcgaaagatctgggattgacgttaaccgagatttctgagcgt
gcgctacgcgttgctgctgagtctggtgagcaatattttagcgtggatgcggggagagga
gagctgctggtgaacgacagaatagacagagaggctttatgcggacaaagcgccagctgt
gtgttgcctttacagttagttcttgaaaaacctctgagtttacatcgccttgaggttgaa
attcaagatattaatgacaatcctcctaaattctatactgaggaattgtttttaaatatt
tccgaatcggctgctgtgggaactcgatttccattagagagcgcagaggactcggatgtt
ggtggaaattcagtaaaatcctacactttgacaaagaatgacttctttgtgttaaaaatg
aaagaggtcgaagacggaaaaacagtcccagagttggtgttggagaagccgcttgatcga
gaaataaaagctgttcatcagctccgtctcactgcgttagatggaggaaaccccatgaaa
tccggtacctctacaataactgtaactgtgcttgataacaatgataacttcccagtgttt
gaaaagagttcatatcgcgtttctttacttgaaaatacggcaaaaggttcgtttgtaatc
aaaatagctgcgagtgacgccgatgagggatcaaatggagaaattcggttttctttcggc
gcgcggacacctgattccgtgttaacattatttgagattaaaactctaagcggagaaatt
attttaaaaggcgatttagattacgaaagagagacgtcctacaaatttgagataactgca
aaagataaagggagtccggaaatgcaaagtcactgccgcctccagatagatgttgttgac
gtaaatgacaataaaccagaaatcgttctgacttctgaaccacagccagtgcgcgaggac
gcaccgggaggcactgtggtggcgttacttaatgtgcgcgatgcagactccggtaataac
agtaaagtgcatttacaaatatcaaaaggttctccttttaaattaaagtcatcgtttttt
aataattatgcactaataactagtggtcctttagacagagaaaaaatatcagattatcat
gtggaaataaccgctactgactctggatctcccccgctgtcttgtaaaagaattgtatct
gtcagcgtcactgacgttaatgacaatcctccagtttttacgcagcggtcttataacgtg
tatttaaaggagaacggagttccgggttctattctgttctcagtatccgcgtctgacctg
gattcaggtgaaaacgcaaagatctcttactccattctggactcgaaagtccaggacgtg
tccgtgtcctcctatgtttacatgaactcagagaacggcagcatctacagcatgcactcg
tttgactatgagaagctgaaggtgtttgagatccacgttcaggcaaaggaccagggctct
ccttctctcagcagcaacgctactgtccacgtctttattctggaccagaacgataacgcc
cccgccgtcatttacccctcctccgctgctctgggctccctctctcatcagaggatgccc
cgctccgccaaagcgggtcacctggttaccaaggtgacggcggtggacgctgactcgggc
cataacgcctggatctcctacagactggcggaggccacagacgcctctctgttcaccgtc
agtctgtacacaggagaagtgaggactaaacgcgctgtgtccgagcaggacgactcctct
cagaggctgatcctagagatcaaagacgacggagagccgctccaatccgccaccgtcacg
gtgtccatcctgctggaggacgctctccacgagcccatctcagagctgcgacaccacaaa
gcgtccgagcccagcaagaaaacgggcagaatcaccctttatttgattctgtctctggcc
tcggtgtccgtgctgtctctgctgacttttgtcatcttagcggtgaaatgcatgaggaac
agcagaagcagcggcagctgctgctgcatgagacgcagcgactcggatgattacaagaac
cccaacagaaacctgcagattcagctcaacaccgatggacctatcaagtacgtggaggtc
ctgggaggagacatgatgtctcagagtcagtccttcaggtcctgcatgtctcccatgtca
gagtacagtgatttcactctgattaaacccagcagcaccacagactttaaggaggtcatc
agtgtgctggatgcctctttacctgacagcacctggacatttgagagtcaacaggtgagc
agcgagttgtaa

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