Oryzias latipes (Japanese medaka): 101174016
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Entry
101174016 CDS
T02443
Symbol
prkcd
Name
(RefSeq) protein kinase C delta type
KO
K06068
novel protein kinase C delta type [EC:
2.7.11.13
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04140
Autophagy - animal
ola04270
Vascular smooth muscle contraction
ola04621
NOD-like receptor signaling pathway
ola04625
C-type lectin receptor signaling pathway
ola04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101174016 (prkcd)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
101174016 (prkcd)
04625 C-type lectin receptor signaling pathway
101174016 (prkcd)
09152 Endocrine system
04912 GnRH signaling pathway
101174016 (prkcd)
09153 Circulatory system
04270 Vascular smooth muscle contraction
101174016 (prkcd)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ola01001
]
101174016 (prkcd)
Enzymes [BR:
ola01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.13 protein kinase C
101174016 (prkcd)
Protein kinases [BR:
ola01001
]
Serine/threonine kinases: AGC group
PKC family [OT]
101174016 (prkcd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PKC_C2
PK_Tyr_Ser-Thr
C1_1
Pkinase_C
C1_2
ABC1
zf-RING-like
RH_dom
Kinase-like
PHD
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
101174016
NCBI-ProteinID:
XP_011472963
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Position
5:complement(3792839..3814261)
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AA seq
684 aa
AA seq
DB search
MAPFLRIAFNSYDLGILPPSADKPFCAIKIKEALTTDRGKTLIQKKPTMYPAWKACFDAH
IYEGRVLELLLMRTADEALAEVSVGVSVLAERCKKANGRAEFWVDLQPSGKVMMAVQYFL
EDVDAESKQAVKEEEAPTLNRRRGAIKQAKIHFIKNHEFIATFFRQPTFCSVCREFVWGL
NKQGYKCRQCNAAIHKKCIDKIIGRCTGTATNSRDTVFQKERFKIDMPHRFKTNNYMSPT
FCDHCGSLLWGLVKQGLKCEDCAMNVHHKCQKKVANLCGINQKLLAEALTQVSQKSSTRR
SDPNLPPMPDIGIYDEVNKLAGLELNDASPYGRLWEGCSPRPQSRITHLTRINVDNFIFH
KVLGKGSFGKVLLAELKGSGEYFAVKALKKEVVLMDDDVECTMVEKRVLALAWENPFLTH
LYSTFQTKEHLFFVMEYLNGGDLMFHIQEKGRFDLNRATFYSAEIVCGLEFLHSKGIIYR
DLKLDNVMLNHEGHIKIADFGMCKEDVFGDNRATTFCGTPDYIAPEILLGQKYSFSVDWW
SFGVLLYEMLVGQSPFHGDDEDELFESIRMDTPHYPRWINKEAKDLLEQLFDREPTHRLG
VVGNIRQHSFFKTINWQALERREVEPPFKPKVKAPNDCSNFDREFLSEKPRLSQSDKNFI
DSMDQSAFSGFSFINPKMERLLEN
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggctcctttcttgaggatcgcctttaactcgtacgacttgggtattctgcctccctcg
gcggataagcccttctgtgcgatcaagataaaagaagctctaacaactgatcgaggcaag
acgttgattcagaaaaagcccaccatgtatccagcctggaaggcctgctttgatgctcac
atatacgaaggtcgggtgctggagctgctcctgatgaggacagcggacgaggcgctggcc
gaggtctccgtgggcgtgtctgtcctcgctgagcgctgcaaaaaagcgaatggacgggct
gaattctgggtggatcttcaaccctctggaaaagtcatgatggcagtgcaatatttcctg
gaggatgtagatgcagagagtaagcaagctgtgaaggaggaagaagctccaactctgaac
cgcagacgaggggccatcaagcaggccaagatccacttcatcaagaaccacgagtttatc
gccacgttcttccgacagcccactttctgctctgtgtgcagagaatttgtgtggggactc
aacaaacaaggctataaatgcagacaatgcaatgcagccatccacaagaaatgcatagac
aaaatcataggcagatgtaccgggacggctaccaacagtcgggatactgtgttccaaaag
gagcgttttaaaattgacatgccgcaccgtttcaaaaccaacaattacatgagccccacc
ttctgtgaccactgtgggagcctgctgtggggtctggtcaaacaaggcctgaagtgtgaa
gactgcgcaatgaatgtccaccataagtgtcaaaagaaagttgcaaacctttgtggtata
aaccagaagttactagctgaagcgctaacacaagtcagtcagaaatcctccactcgccgc
tccgaccccaaccttcctcctatgcctgatattggaatttacgatgaagtaaacaagctt
gctggacttgagctcaatgatgcgtctccctacggcagactgtgggaaggatgcagccca
cggccacaatctcgcataacccacctgacccgcatcaacgtggacaacttcatcttccac
aaagtgttgggaaaaggcagcttcggaaaggtccttctagcagagttgaagggcagtggg
gaatattttgcagtgaaagctctgaagaaggaggtggtgctgatggatgatgatgtagag
tgcaccatggtggagaagagggtcttggctttggcctgggaaaaccccttcctcacacac
ctttactccacgttccagacaaaggaacatctgttttttgtcatggagtacctaaacgga
ggtgacctgatgtttcatattcaggaaaaaggacgttttgacctcaacagagccacgttc
tactcggctgagatcgtctgcggtctggagttcttgcattctaaagggatcatctacaga
gatctaaagttagacaatgtgatgctgaatcatgagggtcacatcaaaattgctgacttt
ggcatgtgtaaggaggacgtgtttggtgataatcgtgccacaactttctgtggaactcct
gactacatcgccccagagattctgctgggacagaagtactcattctcagtggactggtgg
tccttcggggtgttgctgtatgagatgctggtgggtcagtcaccgttccatggagacgac
gaggacgagctgtttgagtccatccgcatggacacgccccactacccccgctggataaac
aaggaggccaaagacctgcttgagcagttgtttgacagagagcccacacacagactagga
gttgtgggaaacattcggcaacactccttcttcaaaaccatcaactggcaagccttggaa
aggagagaggttgaaccccctttcaagcccaaagtgaaagccccgaacgactgcagcaac
tttgatcgggaattcctgagtgagaagccgcgcctgtctcaaagcgacaagaactttata
gactccatggatcagtctgcgttttccggattctccttcataaaccccaaaatggagcgc
cttttagaaaactga
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