Oryzias latipes (Japanese medaka): 101175217
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Entry
101175217 CDS
T02443
Symbol
exd2
Name
(RefSeq) exonuclease 3'-5' domain-containing protein 2
KO
K20777
exonuclease 3'-5' domain-containing protein 2 [EC:
3.1.11.1
]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ola03400
]
101175217 (exd2)
Enzymes [BR:
ola01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
101175217 (exd2)
DNA repair and recombination proteins [BR:
ola03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
101175217 (exd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RRXRR
Ribosomal_S14
Motif
Other DBs
NCBI-GeneID:
101175217
NCBI-ProteinID:
XP_004085540
UniProt:
H2MZR9
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All DBs
Position
22:1066876..1071308
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AA seq
623 aa
AA seq
DB search
MSYRGPLTAVITTILGAAIGGLLMWRAYGTKRKKLPPDQEVADPAEGPHPDEEGLLDVHL
PSTEKDGRAVDAQPSEAPPAAQMPPCEQLKPVLVSSEEEWRQLWPRVQEELSVLPVLGLD
CEWVSVKGRASEVSLLQMSTYSGLCALVRLLVFRNGQRAFPLSFVELLKDPKVLKVGVGC
YEDGKRLTRDHGLVLSCTVDLRYLAMRQRRTAADNGLSLKSLAADLLNFSLDKSPELRCS
DWEADQLTLNQVTYAARDAQVAVALFLHLLGLRPGPAPFSELASRCQGLLDVPFRARGDG
EDGAGGGEKRRRTKKPTVYESPESGDQRVPDPRRNRRKPLGADYSARKSPLYDNCFLYAP
DGQPLCTCDKKKARWYLNKGIGVLQSEDPFIVRLLFEPSGRPESQHDYYLTEKENLCVVC
GKADSYIRKNIVPHEYRRHFPTELKDHNSHDILLLCTSCHAASNVHDGVLKQMLAEEFSA
PQGCEEGVRVFEDSDRRRVRSAARALLSSGDGLPEQRKEELQLLIRKFLNMEEEGEELTE
EALQEAAGLETRILNEAYVPHGLKVVRAHAQRGLRGLMELERRWRQHFLSSMQPRHLPPL
WSVDHNHSKFLRRYGAELPINLN
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtaccgagggcctctgaccgccgtcataaccaccattctcggggcggccattggg
gggctgctcatgtggcgagcatacggcaccaagaggaagaagctgcctcccgaccaggag
gtggccgatcctgctgagggcccccaccccgatgaggaggggctcttagatgtccatctg
ccctccacagagaaggatgggagggccgtggatgctcagccctctgaagcgccccctgct
gcccagatgccgccgtgcgagcagctgaagccggtgctggtgagcagtgaggaggaatgg
cggcagctgtggccccgggtgcaggaggagctgtccgtcctccccgtgctggggctggac
tgtgaatgggtgtcggtaaaggggcgggcctcggaggtgtcgctgctgcagatgtccacg
tactccggtctttgcgctctggtgcggctgctggtgttccggaacggacagcgggcgttc
ccgctcagcttcgtggagctcctgaaagacccgaaggtcctgaaggtcggcgtggggtgc
tacgaggacgggaagcggctgacgcgcgaccacggcctggtgctgtcctgcacggtcgac
ctgcgctacctggcaatgaggcagaggagaacggctgcggacaacggcctgagcctgaag
tcgctggctgcagatctgctgaacttctctctggataaatctccggagctgcgctgcagc
gactgggaggcggatcagctgacgctcaatcaggtgacctacgctgccagagacgctcag
gtcgccgtggcgctcttcctccacctcctcggcctccggcctggtcccgcccccttctca
gagctggcgtcccgctgccagggtctgctggacgtcccgttccgagccagaggagacggg
gaggacggcgctggggggggggagaagagaaggaggaccaagaagccgacggtttacgag
agtccagagtctggagatcagcgagtcccagaccctcggaggaaccggaggaaaccgctg
ggcgccgactactcggccaggaagtctcctctgtacgacaactgcttcctgtacgcccct
gacgggcagccgctgtgcacctgcgacaagaagaaggcccggtggtacctgaacaaagga
atcggggtccttcagagtgaggatcccttcatcgtgaggctgctgttcgagccgtcgggc
cgtccggagtcgcagcacgactactacctgaccgaaaaggagaacctctgcgtcgtctgc
ggaaaggccgactcctacatcaggaagaacatcgttccgcacgagtaccggcggcacttc
cccaccgagctgaaggaccacaactcccacgacatcctgctgctctgcaccagctgccac
gccgcctccaacgtgcacgacggcgtcctgaagcagatgctggccgaggagttctctgcc
ccccagggctgcgaggagggcgtccgcgtgtttgaggactcggaccggcggcgcgtgcgc
tcggcggctcgcgctctgctaagcagcggagacggactgccggagcagcggaaggaggag
ctacagctgctgatcaggaagttcctgaacatggaggaggagggggaggagctgacggag
gaggcgctgcaggaggccgccggtctggaaaccaggatcctgaacgaggcctacgttcct
cacggcctgaaggtggtgcgcgcccacgcccagcggggcctccggggcctgatggagctg
gagcgccgctggaggcagcacttcctgagcagcatgcagccccgccacctgccccccctg
tggtccgtggaccacaaccatagcaagttcctccgcagatacggggcggagctccccata
aatctgaactga
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