KEGG   Oryzias latipes (Japanese medaka): 111947997
Entry
111947997         CDS       T02443                                 
Name
(RefSeq) protocadherin gamma-C5-like
  KO
K16497  protocadherin gamma subfamily C
Organism
ola  Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:ola00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ola04515]
    111947997
Cell adhesion molecules [BR:ola04515]
 Cadherins
  Protocadherins
   111947997
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 Ig_GEX2_N
Other DBs
NCBI-GeneID: 111947997
NCBI-ProteinID: XP_023814924
LinkDB
Position
10:complement(14803365..14807308)
AA seq 824 aa
MTKRKGYVHWRWQALWWHHFFLLWSTTNGQTRYSIQEELKQGSVVGNLARDLGLGLSEIF
ERKLRVASEAGEQYFSVDAGRGELLVNDRIDREDLCGQSASCVLPLQVVIEDPLQLFRVE
VEILDINDNPPRFPSNQINLEIAESTVVGVRFPLESAVDLDVGSNSLKSYSLSKDDSFSV
RVKDVAGERKVPELILAKVLDREKKAVHKLILTAQDGGNPVKSGTVQIIVTVLDNNDNVP
VFEKTSYKVSVSENAEKGELIVQTKATDADDGQNGEIEYSFGARTPEAVLSVFTIDSVSG
TVFLKGRLDFETAVNYELDVSAKDKGTPRMEGHCTVHVDILDVNDNSPEIIFTSHPKPVR
EDSSNGTVIALLSVRDLDSGENGKVTLAVQKNSNFALKPSFSQNYALVTNGVLDREKISE
YNIEITATDSGIPPLSSKKKIPVSITDVNDNPPVFTQRSYNVYLKENEVPGSILFSVSAS
DLDSGENAKISYSILDSKVQDVSVSSYVYMNSENGSIYSMHSFDYEKLKVFEIHVQAKDQ
GSPSLSSNATVHVFILDQNDNAPAVIYPSSAALGSLSHQRMPRSAKAGHLVTKVTAVDAD
SGHNAWISYRLAEATDASLFTVSLYTGEVRTKRAVSEQDDSSQRLILEIKDDGEPLQSAT
VTVSILLEDALHEPISELRHHKASEPSKKTGRITLYLILSLASVSVLSLLTFVILAVKCM
RNSRSSGSCCCMRRSDSDDYKNPNRNLQIQLNTDGPIKYVEVLGGDMMSQSQSFRSCMSP
MSEYSDFTLIKPSSTTDFKEVISVLDASLPDSTWTFESQQVSHN
NT seq 2475 nt   +upstreamnt  +downstreamnt
atgacaaagagaaaaggatatgtacactggagatggcaagccctttggtggcatcatttt
ttccttttgtggagtacaacaaacgggcagactcggtacagcatccaggaggagctcaag
cagggctctgtggtaggaaatctcgccagagatttaggtttaggactctctgagattttc
gagcgaaaattacgcgtcgcctctgaggccggtgagcagtatttcagcgtggatgcgggg
agaggagagctgctggtgaacgacagaatagacagagaggatttatgcggacaaagtgcc
agctgtgtgttgcctttgcaggttgtcattgaagatccactgcagctttttcgcgttgaa
gtagaaattttagacataaacgataatccgcccaggtttccgtccaatcaaatcaatttg
gaaattgcagagtccacagtggtgggtgttcggtttcctttagaaagcgccgtcgattta
gatgtcggcagtaactcattgaagtcctacagtctcagtaaagacgatagcttcagcgtt
agagtaaaagatgttgctggcgaaaggaaagtccctgaactgattttagcaaaagtttta
gacagagagaaaaaagccgttcacaagctgattctgacagctcaagatggtggaaacccg
gtgaaatcgggaacagttcaaataatcgtcacagttttagacaataatgataatgtccca
gtatttgagaaaacctcatataaagtgtcagtaagtgaaaatgctgaaaagggtgaatta
atagtgcaaacaaaagcgacagacgcagatgacggtcaaaacggagaaatagaatattca
tttggagcgcgcacaccggaggccgttctttctgtttttaccattgattccgtatcagga
accgtgtttctaaagggaaggttagacttcgaaacagctgttaattatgagttggatgtt
agtgctaaagataaaggcaccccgagaatggaggggcattgtactgtgcacgtggacatt
ttggatgtgaacgataattcaccagaaataattttcacctcacatccaaagccagtacga
gaggattcatctaatggaactgttatagccctgctcagtgtgcgagacctggactctggt
gaaaacggaaaagtcacattggcagtccagaagaactccaactttgccctgaaaccgtct
ttctcgcaaaattacgcgctcgttacgaacggtgttctcgaccgagagaagatctctgaa
tacaatatcgagataacagcaactgattcaggtattccgcccctttcaagtaaaaaaaag
attcctgtcagcatcactgatgtgaatgacaatcctccagtttttacgcagaggtcttat
aacgtgtatttaaaggagaacgaagttccgggttctattctgttctcagtatctgcgtct
gacctggattcaggtgaaaacgcaaagatctcttactccattctggactcgaaagtccag
gacgtgtccgtgtcctcctatgtttacatgaactcagagaacggcagcatctacagcatg
cactcgtttgactatgagaagctgaaggtgtttgagatccacgttcaggcaaaggaccag
ggctctccttctctcagcagcaacgctactgtccacgtctttatcctggaccagaacgat
aacgcccccgccgtcatttacccctcctccgctgctctgggctccctctctcatcagagg
atgccccgctccgccaaagcgggtcacctggttaccaaggtgacggcggtggacgctgac
tcgggtcataacgcctggatctcctacagactggcggaggccacagacgcctctctgttc
accgtcagtctgtacacaggagaagtgaggactaaacgcgctgtgtccgagcaggacgac
tcctctcagaggctgatcctagagatcaaagacgacggagagccgctccaatccgccacc
gtcacggtgtccatcctgctggaggacgctctccacgagcccatctcagagctgcgacac
cacaaagcgtccgagccaagcaagaaaacgggcagaatcaccctttatttgattctgtct
ctggcctcggtgtccgtgctgtctctgctgacttttgtcatcttagcagtgaaatgcatg
aggaacagcagaagcagcggcagctgctgctgcatgagacgcagcgactcggatgattac
aagaaccccaacagaaacctgcagattcagcttaacaccgatggacctatcaagtacgtg
gaggtcctgggaggagacatgatgtctcagagtcagtccttcaggtcctgcatgtctccc
atgtcagagtacagtgatttcactctgattaaacccagcagcaccacagactttaaggag
gtcatcagtgtgctggatgcctctttacctgacagcacctggacatttgagagtcaacag
gtgagccacaactaa

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