Oryzias latipes (Japanese medaka): 111947997
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Entry
111947997 CDS
T02443
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ola04515
]
111947997
Cell adhesion molecules [BR:
ola04515
]
Cadherins
Protocadherins
111947997
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Ig_GEX2_N
Motif
Other DBs
NCBI-GeneID:
111947997
NCBI-ProteinID:
XP_023814924
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All DBs
Position
10:complement(14803365..14807308)
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AA seq
824 aa
AA seq
DB search
MTKRKGYVHWRWQALWWHHFFLLWSTTNGQTRYSIQEELKQGSVVGNLARDLGLGLSEIF
ERKLRVASEAGEQYFSVDAGRGELLVNDRIDREDLCGQSASCVLPLQVVIEDPLQLFRVE
VEILDINDNPPRFPSNQINLEIAESTVVGVRFPLESAVDLDVGSNSLKSYSLSKDDSFSV
RVKDVAGERKVPELILAKVLDREKKAVHKLILTAQDGGNPVKSGTVQIIVTVLDNNDNVP
VFEKTSYKVSVSENAEKGELIVQTKATDADDGQNGEIEYSFGARTPEAVLSVFTIDSVSG
TVFLKGRLDFETAVNYELDVSAKDKGTPRMEGHCTVHVDILDVNDNSPEIIFTSHPKPVR
EDSSNGTVIALLSVRDLDSGENGKVTLAVQKNSNFALKPSFSQNYALVTNGVLDREKISE
YNIEITATDSGIPPLSSKKKIPVSITDVNDNPPVFTQRSYNVYLKENEVPGSILFSVSAS
DLDSGENAKISYSILDSKVQDVSVSSYVYMNSENGSIYSMHSFDYEKLKVFEIHVQAKDQ
GSPSLSSNATVHVFILDQNDNAPAVIYPSSAALGSLSHQRMPRSAKAGHLVTKVTAVDAD
SGHNAWISYRLAEATDASLFTVSLYTGEVRTKRAVSEQDDSSQRLILEIKDDGEPLQSAT
VTVSILLEDALHEPISELRHHKASEPSKKTGRITLYLILSLASVSVLSLLTFVILAVKCM
RNSRSSGSCCCMRRSDSDDYKNPNRNLQIQLNTDGPIKYVEVLGGDMMSQSQSFRSCMSP
MSEYSDFTLIKPSSTTDFKEVISVLDASLPDSTWTFESQQVSHN
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagagaaaaggatatgtacactggagatggcaagccctttggtggcatcatttt
ttccttttgtggagtacaacaaacgggcagactcggtacagcatccaggaggagctcaag
cagggctctgtggtaggaaatctcgccagagatttaggtttaggactctctgagattttc
gagcgaaaattacgcgtcgcctctgaggccggtgagcagtatttcagcgtggatgcgggg
agaggagagctgctggtgaacgacagaatagacagagaggatttatgcggacaaagtgcc
agctgtgtgttgcctttgcaggttgtcattgaagatccactgcagctttttcgcgttgaa
gtagaaattttagacataaacgataatccgcccaggtttccgtccaatcaaatcaatttg
gaaattgcagagtccacagtggtgggtgttcggtttcctttagaaagcgccgtcgattta
gatgtcggcagtaactcattgaagtcctacagtctcagtaaagacgatagcttcagcgtt
agagtaaaagatgttgctggcgaaaggaaagtccctgaactgattttagcaaaagtttta
gacagagagaaaaaagccgttcacaagctgattctgacagctcaagatggtggaaacccg
gtgaaatcgggaacagttcaaataatcgtcacagttttagacaataatgataatgtccca
gtatttgagaaaacctcatataaagtgtcagtaagtgaaaatgctgaaaagggtgaatta
atagtgcaaacaaaagcgacagacgcagatgacggtcaaaacggagaaatagaatattca
tttggagcgcgcacaccggaggccgttctttctgtttttaccattgattccgtatcagga
accgtgtttctaaagggaaggttagacttcgaaacagctgttaattatgagttggatgtt
agtgctaaagataaaggcaccccgagaatggaggggcattgtactgtgcacgtggacatt
ttggatgtgaacgataattcaccagaaataattttcacctcacatccaaagccagtacga
gaggattcatctaatggaactgttatagccctgctcagtgtgcgagacctggactctggt
gaaaacggaaaagtcacattggcagtccagaagaactccaactttgccctgaaaccgtct
ttctcgcaaaattacgcgctcgttacgaacggtgttctcgaccgagagaagatctctgaa
tacaatatcgagataacagcaactgattcaggtattccgcccctttcaagtaaaaaaaag
attcctgtcagcatcactgatgtgaatgacaatcctccagtttttacgcagaggtcttat
aacgtgtatttaaaggagaacgaagttccgggttctattctgttctcagtatctgcgtct
gacctggattcaggtgaaaacgcaaagatctcttactccattctggactcgaaagtccag
gacgtgtccgtgtcctcctatgtttacatgaactcagagaacggcagcatctacagcatg
cactcgtttgactatgagaagctgaaggtgtttgagatccacgttcaggcaaaggaccag
ggctctccttctctcagcagcaacgctactgtccacgtctttatcctggaccagaacgat
aacgcccccgccgtcatttacccctcctccgctgctctgggctccctctctcatcagagg
atgccccgctccgccaaagcgggtcacctggttaccaaggtgacggcggtggacgctgac
tcgggtcataacgcctggatctcctacagactggcggaggccacagacgcctctctgttc
accgtcagtctgtacacaggagaagtgaggactaaacgcgctgtgtccgagcaggacgac
tcctctcagaggctgatcctagagatcaaagacgacggagagccgctccaatccgccacc
gtcacggtgtccatcctgctggaggacgctctccacgagcccatctcagagctgcgacac
cacaaagcgtccgagccaagcaagaaaacgggcagaatcaccctttatttgattctgtct
ctggcctcggtgtccgtgctgtctctgctgacttttgtcatcttagcagtgaaatgcatg
aggaacagcagaagcagcggcagctgctgctgcatgagacgcagcgactcggatgattac
aagaaccccaacagaaacctgcagattcagcttaacaccgatggacctatcaagtacgtg
gaggtcctgggaggagacatgatgtctcagagtcagtccttcaggtcctgcatgtctccc
atgtcagagtacagtgatttcactctgattaaacccagcagcaccacagactttaaggag
gtcatcagtgtgctggatgcctctttacctgacagcacctggacatttgagagtcaacag
gtgagccacaactaa
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