Osmia lignaria (orchard mason bee): 117602843
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Entry
117602843 CDS
T09775
Name
(RefSeq) DNA ligase 4 isoform X1
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
olg
Osmia lignaria (orchard mason bee)
Pathway
olg03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
olg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
117602843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
olg03400
]
117602843
Enzymes [BR:
olg01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
117602843
DNA repair and recombination proteins [BR:
olg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
117602843
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_A_C
DNA_ligase_IV
RNA_ligase
BRCT_2
mRNA_cap_enzyme
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
117602843
NCBI-ProteinID:
XP_034177240
LinkDB
All DBs
Position
Unknown
AA seq
916 aa
AA seq
DB search
MKIYFKELYLLKQLKNFYRILTKNEMSLASKIEFKKLCNVFKETEKASSAKKVEVLEKFI
QQCRIISLKLKAEFPDMDVSLYPVMRLILPHLERERGPHNLKEKSLAGLYIRVFCLGKNS
KHAKKLLQYKAPTRKKIAGCDFAGKAYYILQNHLLRNSSNFTIEYINEFLDNISGESIQH
KDEIFKMLLAKINPLEFKWITRIILKDLKLGIGTKRILQVFHPDANRSFEVSSNLHQVCD
TLYDRQLRYHHNIKVFFHFKPMLLERCHIEDVEKLFDSNKEYFIQTKYDGERSQMHMKDG
KYKYFTRQGYDITDNPSYGETSSLGFMSGVFSRLLNPKCKSIILDGELMGWHKERKSFGS
KGMSFDVKKLSENSHHQPCFVAFDIIMYNDTLLNNEPYAKRLEILKDAFKEEEGCLMLCK
STKISNSEELRKIFNESIQNKEEGIVLKECNSKYKPNVRDGNGCYKIKAEYSDDLVQDVD
LIILGGYYGEGKFIGLMKSFLMGVASPPEISGENPTEFFSVVSVSNGFSLETLKELWKMF
EGKWHTERPQNVVPPRLQPPDKWIRPVDSIIVTIRATEMTQSNDYPTGYSLRFPRVMKVR
TDKPWYSVCTTDELLSLIKDTRPIQKLTKREVNYEDIEESPKQKLRKIKYRLPKFESKTM
KFSNYDNCLTRLFDDKEIYVINGDNELPKERIEEILLQHKAKVVQSPSKNNYCIIVDNPR
TSRANNIIKSKRYDVVTLDWFRRVTKEENWPSLQDFLPWDLISCRESTKQRLAQYYDDYY
DSFTVNANKESLLRSFKRIEAMKIAHELDCAQMKEIDEELFEDGISPYSNFRGIVGYFDD
DPSNGSKFEFHFMGGTIKETLDDSVTHVFISKDFINPELENLIEDKSRESLTVVKSEWIG
KCFQQGAIIANTSYLI
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatttacttcaaggagttatatttactgaaacaattaaagaatttttatcgaatt
ttaactaaaaacgaaatgtcattagcttctaaaattgaatttaagaaactgtgcaatgtc
tttaaagaaactgaaaaagcatccagcgctaagaaggttgaggtgttagagaaatttatc
caacaatgtcgtattatcagcctcaaattaaaagcggaatttccagatatggatgtttca
ctctatcctgtaatgagattaatcttgcctcatcttgaacgtgaacgaggaccacacaat
ttaaaggaaaaatcacttgccggtctttacattcgcgtgttttgtttgggtaaaaatagc
aagcatgcaaagaaacttctgcaatacaaagcaccaacaaggaagaagattgctggatgt
gattttgcaggaaaagcttattatattttacaaaatcatttactacgtaacagttccaat
ttcacaatagaatatattaatgaatttcttgataatatatcaggtgaaagtattcaacat
aaggatgaaatatttaagatgttattggcaaaaataaacccattagaatttaaatggata
acacgaattattctaaaagatttaaaacttggtattgggacaaagagaatattacaagtc
tttcatcctgatgcaaatagatcgtttgaagtatcatctaatttgcatcaagtttgcgat
acattatatgatcgtcaattgagatatcatcataatattaaagttttctttcatttcaaa
cctatgctgttggaaagatgtcacattgaagatgtagagaaactttttgattcaaataag
gagtattttatacaaactaaatatgatggtgaacgatctcaaatgcatatgaaagatggc
aaatataaatattttacaagacaaggatatgatatcacagataatcctagttatggggaa
actagttctttaggtttcatgagtggtgtatttagtcgactattaaatccaaaatgcaaa
tcaatcattcttgatggtgaattgatgggttggcataaagaaaggaaatcgtttggttca
aaaggaatgagttttgatgttaagaagctttcagaaaatagtcatcatcagccatgtttt
gttgcttttgatattatcatgtataatgatactttacttaataatgaaccttatgcaaaa
agattagagattttaaaagatgcatttaaagaggaagaaggatgtctaatgttgtgtaaa
tctactaaaatttctaacagtgaggaattacgtaaaatatttaatgaaagtattcaaaac
aaagaagaagggattgtattaaaagaatgtaacagtaaatataaaccaaatgtgcgcgat
ggtaatggttgttataaaataaaagctgagtactccgatgatttggtgcaagatgtagat
ttaattattcttggtggttattatggcgaaggaaaatttataggtttaatgaaaagcttt
ttaatgggagtagcctcaccaccagaaatttctggtgagaatcctacggaatttttttcc
gttgtatctgttagcaacggtttttctctagaaacattgaaagaactttggaaaatgttt
gaaggaaaatggcacacagaacgtccacaaaatgtggtgcctcctaggcttcagccgcca
gataaatggattcggcctgttgattccattattgtgacaatacgagctacagagatgacg
caaagtaatgattatccaacaggatatagtttacgatttcctagagttatgaaagttaga
actgataaaccatggtacagtgtttgtactacggacgaacttttatctttaattaaggat
acacgaccaattcagaaattaacaaaacgagaagtaaattacgaggacatagaagaatcc
cctaaacaaaaactacgcaaaataaaatatcgtttaccaaaattcgaaagtaaaacaatg
aaatttagcaattatgacaattgtcttactcgactttttgatgataaagaaatttatgtg
ataaatggagataatgaattacctaaggaacgtattgaagaaattcttttgcagcataaa
gcaaaggttgtgcaaagcccgtcgaaaaataactattgtattattgttgacaatcctaga
acgtccagagcaaacaatatcataaagagtaaaaggtatgatgtagtgacattagattgg
ttcagacgagttactaaagaagaaaattggccatcgttacaagactttttaccatgggac
ttaatatcctgtcgtgaatcgacaaagcaacgattagcacaatattatgatgattattac
gatagctttactgtaaatgcgaacaaagagagtttgttacgttcgtttaaaaggattgaa
gcaatgaagatagcccatgaacttgattgcgcgcaaatgaaagaaatagatgaagaatta
tttgaggatggcatatcaccatattccaattttcgaggcatagtaggctactttgatgat
gatccgtcaaatggatcaaagtttgagtttcattttatgggtggaacgattaaagaaacc
ctggacgattccgttacacacgtatttattagtaaagatttcataaatcctgaacttgaa
aacttgatcgaagataagtcacgggaatcattaacagttgttaagagcgaatggattgga
aaatgtttccaacaaggagcaattattgctaatacgtcgtatttaatttag
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