Olivibacter sp. LS-1: FKG96_26345
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Entry
FKG96_26345 CDS
T06195
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
oli
Olivibacter sp. LS-1
Pathway
oli03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
oli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FKG96_26345 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oli03400
]
FKG96_26345 (nth)
Enzymes [BR:
oli01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FKG96_26345 (nth)
DNA repair and recombination proteins [BR:
oli03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FKG96_26345 (nth)
Prokaryotic type
FKG96_26345 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
DUF2400
DUF763
Motif
Other DBs
NCBI-ProteinID:
QEL04200
UniProt:
A0A5C0ZSN5
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All DBs
Position
complement(6342455..6343120)
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AA seq
221 aa
AA seq
DB search
MLKKDRFREFVAYFSSHNPDAQTELHYSNAFELLVAVILSAQCTDKRINQITPKLFERFP
DAETLAAASVEEVFTYIRSVSYPNNKAKHLVGMAKMLLEKFEGTIPSDINDLQKLPGVGR
KTANVIASVVYDAPAIAVDTHVFRVSNRIGLTNNAKTPLAVEKQLVHYLPKNTLAVAHHW
LILHGRYICVARRPKCDECPITYLCKYYEKVYLKGLKAISE
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaaaaagatcgttttcgagaattcgttgcctatttttcgtcacacaatcctgac
gcgcaaactgaacttcactatagcaatgcctttgaattgttggtcgcggttattctatcc
gctcaatgtacggataaacggattaatcagattacacccaaattatttgaacgctttcct
gatgccgaaacattggctgctgcttctgtagaagaagtattcacttatattcgaagtgta
agttacccaaacaacaaggcaaagcacctcgttggaatggcaaagatgcttctcgagaaa
tttgaaggcactattccatcggatattaacgatttacaaaaattaccgggcgtgggaaga
aaaacagctaacgtcattgcttcggtagtatatgatgctcctgcaattgccgtggataca
catgttttcagggtatccaatcgcattggcctaacgaataacgctaaaactcccttggct
gtggaaaagcagttggttcattatttgcccaaaaacacacttgctgttgcacatcattgg
ttgatattacatgggcgttatatttgcgtagcaagaagacctaaatgcgacgaatgtccc
attacctacctctgcaaatattacgaaaaagtatatctgaagggcttgaaggcaataagt
gaataa
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