Olleya sp. Bg11-27: CW732_10360
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Entry
CW732_10360 CDS
T05214
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
oll
Olleya sp. Bg11-27
Pathway
oll03030
DNA replication
oll03410
Base excision repair
oll03420
Nucleotide excision repair
oll03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
oll00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CW732_10360
03410 Base excision repair
CW732_10360
03420 Nucleotide excision repair
CW732_10360
03430 Mismatch repair
CW732_10360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oll03032
]
CW732_10360
03400 DNA repair and recombination proteins [BR:
oll03400
]
CW732_10360
Enzymes [BR:
oll01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
CW732_10360
DNA replication proteins [BR:
oll03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CW732_10360
DNA repair and recombination proteins [BR:
oll03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
CW732_10360
NER (nucleotide excision repair)
GGR (global genome repair) factors
CW732_10360
MMR (mismatch excision repair)
DNA ligase
CW732_10360
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CW732_10360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
Nlig-Ia
BRCT_2
PTCB-BRCT
Motif
Other DBs
NCBI-ProteinID:
AUC76040
UniProt:
A0A2K8WZX3
LinkDB
All DBs
Position
2311236..2313230
Genome browser
AA seq
664 aa
AA seq
DB search
MSIELELNALREELRGHNYNYYVLDNPTISDYDFDIKLKELQALEAANPEFYDANSPTLR
VGGTVTKNFNTVVHKHRMYSLDNSYSLEDLKDWETRIRKMVDGHVEYVCELKYDGASINL
TYQNGSLLKAVTRGDGTQGDEVTPNIKTINSVPLQLKGGFAEEFEIRGEIILPYEGFIKM
NEERIENGEEPYKNPRNTASGSLKLQDSAEVAKRPLDCLLYGLVGGDFDYKTHFESLEKA
RQMGFKVPKEAQLCQSIEDVFEFINHWDHARHDLPYETDGVVVKVNNLHQQDELGFTSKA
PRWAMAYKFKAEQVSTVLNSISYQVGRTGAITPVANLEPVELAGTIVKRASLHNADQIEK
LDIRVGDTVYVEKGGEIIPKIIAVNLDERPADSQPTQYITNCPECDTTLQREAGEAKHFC
PNYNGCDPQVIGRIQHYISRKAMDIEGLGGETVALLVKAGLIHNYADLYTLTKAQVLPLE
RMAEKSADNLIAGVDASKQIPFERVLFALGIRFVGETVAKKLAKHFKSIDALAFASILDL
EQVDEIGIRIAESVVDFFSDSKNQAIVNRLKSYGLQLEISAEKLAGQTDKLKGQSIVVSG
VFHSVSRTELKKLIEDNGGKVSSSISSKTSYIVAGDNMGPSKKDKADLLKIELISEEDFL
QSLK
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgagtatagaattagaattaaacgcattaagagaagagttaagaggacataattataat
tattatgttttagataatccgacgattagcgattacgattttgatataaaattaaaagaa
ttacaggctttagaagcagcaaatcctgagttttatgatgctaattcgccaacattacgt
gttggtggaacagtaactaaaaattttaatactgtggtccataagcataggatgtatagt
ttagataactcttattctcttgaagatttaaaagattgggaaaccagaataagaaagatg
gtggatggtcatgtggagtatgtttgcgaacttaaatatgatggagcctctataaatcta
acctatcaaaatggaagtttattaaaagcagtgacgcggggcgacggtacgcaaggtgat
gaggtcacgccaaacataaaaacaatcaattcggtgcctttgcagttaaaaggcggtttt
gctgaagaatttgagattagaggtgaaattattttaccatacgagggatttattaagatg
aatgaagaacgcatcgaaaatggagaggaaccttataaaaatccacgtaatacagcatct
ggaagtttaaaattacaggatagtgctgaggttgcaaaacgacctttagattgcttactt
tatggtttagttggtggtgattttgattataagacacattttgaaagcttagaaaaggcg
cgtcaaatgggttttaaagttccgaaagaagcgcagttatgccaaagtattgaggacgtt
tttgagtttataaatcattgggatcatgccagacatgatttaccttatgagacggacggt
gtagtggtaaaagttaataatttacaccaacaagatgagcttggttttacgtccaaagca
ccacgttgggccatggcttataagtttaaagcggagcaggttagtacggttttaaatagt
atttcctatcaagtcgggcgtacaggagcaattactccagttgctaatttagaacctgta
gagttagcggggactattgtaaaacgagcctctttgcataatgcagatcaaattgaaaaa
ctagatattagagtaggagatacggtatatgtggaaaaaggcggtgaaattatacctaaa
attatcgctgtaaatttagacgaacgtccagcagattctcaaccaacacaatacattact
aattgtcctgaatgtgacactactttacaaagagaagcgggggaagcgaaacatttttgt
ccgaattataatggttgcgatcctcaggtaattggtcgtatccaacattatatttcgcgt
aaagcaatggatattgaaggtttaggaggagagactgtagcacttttagtaaaggcagga
ttaatccataattatgcagatttatatacgttgactaaagctcaagtcttgccgttagag
cggatggcagaaaaaagtgctgataatttaatagcaggtgtcgatgcgtctaaacaaata
ccctttgagcgtgtcttatttgctttggggattcgatttgtgggagaaacggttgctaaa
aaattagcgaagcattttaaaagtattgatgctttagcatttgcttctattttagattta
gaacaagttgatgaaattggtattagaatagcagaaagtgttgtcgacttcttttcagat
agtaaaaaccaggctattgtaaatcgattaaaatcttacggcttgcaattagagatttca
gcagaaaaattagctggtcaaaccgataagctaaaaggacagagtattgttgtttcagga
gtatttcattcggtatccagaacagaacttaaaaaattgatagaagataatggcgggaag
gtgagtagttccatctcatctaagactagttatattgttgcaggagataatatggggcca
agcaaaaaagataaggctgatttgcttaaaatcgaactgattagtgaagaggatttctta
caaagtcttaaataa
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