KEGG   Olleya sp. Bg11-27: CW732_10360
Entry
CW732_10360       CDS       T05214                                 
Name
(GenBank) DNA ligase (NAD(+)) LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
oll  Olleya sp. Bg11-27
Pathway
oll03030  DNA replication
oll03410  Base excision repair
oll03420  Nucleotide excision repair
oll03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:oll00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CW732_10360
   03410 Base excision repair
    CW732_10360
   03420 Nucleotide excision repair
    CW732_10360
   03430 Mismatch repair
    CW732_10360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:oll03032]
    CW732_10360
   03400 DNA repair and recombination proteins [BR:oll03400]
    CW732_10360
Enzymes [BR:oll01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     CW732_10360
DNA replication proteins [BR:oll03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     CW732_10360
DNA repair and recombination proteins [BR:oll03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     CW732_10360
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CW732_10360
   MMR (mismatch excision repair)
    DNA ligase
     CW732_10360
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      CW732_10360
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD Nlig-Ia BRCT_2 PTCB-BRCT
Other DBs
NCBI-ProteinID: AUC76040
UniProt: A0A2K8WZX3
LinkDB
Position
2311236..2313230
AA seq 664 aa
MSIELELNALREELRGHNYNYYVLDNPTISDYDFDIKLKELQALEAANPEFYDANSPTLR
VGGTVTKNFNTVVHKHRMYSLDNSYSLEDLKDWETRIRKMVDGHVEYVCELKYDGASINL
TYQNGSLLKAVTRGDGTQGDEVTPNIKTINSVPLQLKGGFAEEFEIRGEIILPYEGFIKM
NEERIENGEEPYKNPRNTASGSLKLQDSAEVAKRPLDCLLYGLVGGDFDYKTHFESLEKA
RQMGFKVPKEAQLCQSIEDVFEFINHWDHARHDLPYETDGVVVKVNNLHQQDELGFTSKA
PRWAMAYKFKAEQVSTVLNSISYQVGRTGAITPVANLEPVELAGTIVKRASLHNADQIEK
LDIRVGDTVYVEKGGEIIPKIIAVNLDERPADSQPTQYITNCPECDTTLQREAGEAKHFC
PNYNGCDPQVIGRIQHYISRKAMDIEGLGGETVALLVKAGLIHNYADLYTLTKAQVLPLE
RMAEKSADNLIAGVDASKQIPFERVLFALGIRFVGETVAKKLAKHFKSIDALAFASILDL
EQVDEIGIRIAESVVDFFSDSKNQAIVNRLKSYGLQLEISAEKLAGQTDKLKGQSIVVSG
VFHSVSRTELKKLIEDNGGKVSSSISSKTSYIVAGDNMGPSKKDKADLLKIELISEEDFL
QSLK
NT seq 1995 nt   +upstreamnt  +downstreamnt
atgagtatagaattagaattaaacgcattaagagaagagttaagaggacataattataat
tattatgttttagataatccgacgattagcgattacgattttgatataaaattaaaagaa
ttacaggctttagaagcagcaaatcctgagttttatgatgctaattcgccaacattacgt
gttggtggaacagtaactaaaaattttaatactgtggtccataagcataggatgtatagt
ttagataactcttattctcttgaagatttaaaagattgggaaaccagaataagaaagatg
gtggatggtcatgtggagtatgtttgcgaacttaaatatgatggagcctctataaatcta
acctatcaaaatggaagtttattaaaagcagtgacgcggggcgacggtacgcaaggtgat
gaggtcacgccaaacataaaaacaatcaattcggtgcctttgcagttaaaaggcggtttt
gctgaagaatttgagattagaggtgaaattattttaccatacgagggatttattaagatg
aatgaagaacgcatcgaaaatggagaggaaccttataaaaatccacgtaatacagcatct
ggaagtttaaaattacaggatagtgctgaggttgcaaaacgacctttagattgcttactt
tatggtttagttggtggtgattttgattataagacacattttgaaagcttagaaaaggcg
cgtcaaatgggttttaaagttccgaaagaagcgcagttatgccaaagtattgaggacgtt
tttgagtttataaatcattgggatcatgccagacatgatttaccttatgagacggacggt
gtagtggtaaaagttaataatttacaccaacaagatgagcttggttttacgtccaaagca
ccacgttgggccatggcttataagtttaaagcggagcaggttagtacggttttaaatagt
atttcctatcaagtcgggcgtacaggagcaattactccagttgctaatttagaacctgta
gagttagcggggactattgtaaaacgagcctctttgcataatgcagatcaaattgaaaaa
ctagatattagagtaggagatacggtatatgtggaaaaaggcggtgaaattatacctaaa
attatcgctgtaaatttagacgaacgtccagcagattctcaaccaacacaatacattact
aattgtcctgaatgtgacactactttacaaagagaagcgggggaagcgaaacatttttgt
ccgaattataatggttgcgatcctcaggtaattggtcgtatccaacattatatttcgcgt
aaagcaatggatattgaaggtttaggaggagagactgtagcacttttagtaaaggcagga
ttaatccataattatgcagatttatatacgttgactaaagctcaagtcttgccgttagag
cggatggcagaaaaaagtgctgataatttaatagcaggtgtcgatgcgtctaaacaaata
ccctttgagcgtgtcttatttgctttggggattcgatttgtgggagaaacggttgctaaa
aaattagcgaagcattttaaaagtattgatgctttagcatttgcttctattttagattta
gaacaagttgatgaaattggtattagaatagcagaaagtgttgtcgacttcttttcagat
agtaaaaaccaggctattgtaaatcgattaaaatcttacggcttgcaattagagatttca
gcagaaaaattagctggtcaaaccgataagctaaaaggacagagtattgttgtttcagga
gtatttcattcggtatccagaacagaacttaaaaaattgatagaagataatggcgggaag
gtgagtagttccatctcatctaagactagttatattgttgcaggagataatatggggcca
agcaaaaaagataaggctgatttgcttaaaatcgaactgattagtgaagaggatttctta
caaagtcttaaataa

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