Ostreococcus lucimarinus: OSTLU_26493
Help
Entry
OSTLU_26493 CDS
T01029
Name
(RefSeq) predicted protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
olu
Ostreococcus lucimarinus
Pathway
olu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
olu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
OSTLU_26493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
olu03400
]
OSTLU_26493
Enzymes [BR:
olu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
OSTLU_26493
DNA repair and recombination proteins [BR:
olu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
OSTLU_26493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
BRCT_2
LIG3_BRCT
RNA_ligase
BRCT
Motif
Other DBs
NCBI-GeneID:
5004601
NCBI-ProteinID:
XP_001420309
JGI:
26493
UniProt:
A4S4Q6
LinkDB
All DBs
Position
11:327320..330304
Genome browser
AA seq
994 aa
AA seq
DB search
MDDVANDSGHRLGTRDGGDDDDDDAEEDGARLTSEPSTSGASLRYATARDVPFRKLCGAF
EALQNERGRSKATSARRYRVLDTLHDRCLVSARDGTRVDAFDAYRLILPALDKERGAYFL
KHDALAKVVVSAFDMSRASEDAKKLEDWKRKGGGNFPQVVRDVLAGGHLADREKDEDART
LTIGDVNEALDALAACDNKDQRASTLRALFSKMDATQVKWTCAIILKETKISMGEKAILR
HYHSEANDLWDWTSDLRRVCEDLPRRDFRMKREDIDVGVGLINPQMARRQNSIDAVYRAL
KGTQFVIETKFDGERIQIHKDGDIINYWTRNMNDFGPRGYDVMNALFRHLPKRCILDGEL
MVWNKLRDQSYPFGALKNLIKAANMRKAKDELFPLKAHLENRDGGDSDGEEDLMSSKYAW
YAENVKKLTYGDLELVYVPFDILYAVDRSVKTHKLRERHELLKEHVREVSVMCGNIRARI
LLATPDCAFSRVGSTKEDIERALLEAMDNGEEGLVIKDLDGPWIPGDRSNNWMKIKPDYL
SSEDLDVVLIGGYYGAGELRGGKISQFLCGIVEATNDPISTASDGVKIMSFCKVGTGISA
MQLDDLRSRLGDFMHREKPQDMNYNVTDAYNEKPDVWIWPPQRSLVVTVKGDIRAIRTTT
FATGYSLRFPRVTGIRYDKKWSDILTLCDLLKTIEEEVPTLKVNIDDTRGGTNARKRSRT
TGPATLLPAHLMPVDVSGVVQESEIFKNMQVHIANCESREQKQELFKAVIARSGTTSELW
HKHVTHSVALNRDGSKFRTASREGDVYTIAWLQECIHEGRVVPPKPRHRLHLSATTWYGT
DAMDRYGDDHFSDCNLADVHALVHQVGDQTKRWKTAEVPALVELDREYPSVCADVKLLTF
RGCVFEIDDSLGKDARVDEQSSMFPSVLAGERRNVEQILRIYGGKLAPEGRMGTHIVRMY
DDSVVFEDMDDGRKQVSLSWVKRCIDRSTTADVV
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgttgcgaatgattccgggcaccgtctcggaacgcgcgacggcggcgacgac
gacgacgacgacgcggaagaggacggcgcgcggttgacgagcgaaccttcgacgtcgggc
gcgtcgctgagatacgccaccgcgcgcgacgtgccgtttcgaaagctgtgcggcgcgttc
gaggcgttgcagaacgaacgcggtcggtccaaggcgacgagcgcgcggcggtatcgagtg
ctcgatacactgcacgatcgatgtctcgtgagcgcgcgcgatggaacccgcgtcgacgcg
ttcgacgcgtatcggttgatactgccggcgttggacaaggaacgaggggcgtatttcttg
aaacacgacgcgttggccaaggtggtggtgtcggcgttcgacatgtctcgagcgagcgag
gacgcgaaaaagttggaggattggaaacgaaagggtggcggtaactttccgcaagttgtt
cgagacgttttggcgggtggacatctcgcggatcgtgagaaagatgaagacgcgcgcacg
ttgaccatcggagacgtgaacgaggcgttggacgcattggcggcgtgcgataacaaggat
cagcgcgcgtcgacgctgcgggcgctgttttcaaagatggatgcgacgcaagtgaaatgg
acgtgcgcaatcatattaaaggaaacaaaaatttcaatgggagagaaggcgatattgcgt
cattatcactccgaagcgaatgacttgtgggattggactagcgatttgcgaagagtttgt
gaagacttaccgcggcgagacttccggatgaagcgcgaggacatcgatgtgggcgtaggt
ttaattaatcctcagatggcgagaaggcaaaacagcatcgatgccgtgtaccgcgcgttg
aaaggtacgcagtttgtcatcgaaaccaaattcgacggcgagcgcattcaaattcacaaa
gacggcgacatcatcaactactggacgagaaacatgaacgattttggccctcgtggctac
gatgtgatgaatgctctctttcgtcatttgccaaagcgatgcattctcgacggcgaactc
atggtttggaacaagcttcgcgatcagtcgtacccgttcggcgcgttgaagaatctcatc
aaggctgcaaatatgcgcaaggccaaggatgaattgtttccactcaaggcacacctcgaa
aaccgtgatggtggtgatagcgacggtgaggaggatctcatgagctccaagtatgcgtgg
tacgccgagaacgtaaagaaactcacgtatggagacttggaattggtctacgttccgttt
gatatattgtatgccgtcgatcgaagtgtgaagactcataagctgagagagcggcatgaa
cttttgaaagagcatgtgcgtgaagtatcagtcatgtgtgggaatattcgtgctagaatt
cttctcgcgacgcccgattgcgcgttctcacgtgtaggctcaacgaaggaggatatcgag
cgcgcgctgttagaagcgatggataacggagaggagggattggtaatcaaagatctcgac
ggtccatggataccaggtgatcgtagcaataactggatgaaaatcaaaccagactactta
tcgagtgaagatttggacgtcgttctcatcggcggctattacggcgccggtgagttgcgc
gggggcaaaatttcgcagttcctctgtggcattgtggaggcaacgaacgatccgattagc
accgcttcagatggagtcaaaatcatgagcttttgcaaggtaggtactggtatcagcgcc
atgcagctcgacgatttgagaagtcggctaggcgacttcatgcacagagaaaagcctcaa
gacatgaactacaacgtcacggatgcttacaacgaaaagccggacgtttggatctggcct
cctcagcgatcattggttgtgacggtgaaaggtgacattcgtgcgattcgcacgacaact
ttcgcaactggttacagcctgcgtttcccccgcgtcaccggtattcgatatgacaaaaaa
tggtccgacatcttgacactctgcgatctcttaaagacgattgaagaggaagtaccgaca
ttgaaagtgaatatcgacgatacacgaggcggtacgaatgcccgaaagcgttcgcgcacg
acgggacccgcgacgctactacctgcacatctcatgccggttgacgtttcgggcgtcgtg
caggaatctgaaatcttcaaaaacatgcaagtgcacatcgcgaactgtgaaagtcgagaa
caaaagcaggagctgttcaaagctgtcatcgcacgtagtggtactacgagtgagttgtgg
cacaagcatgtgacgcacagcgttgcgttgaaccgcgacggctcaaagttcaggacggcg
agtcgggaaggcgatgtgtacacgattgcctggctccaagagtgcattcacgaaggacgt
gtggtaccgccgaaacctcgacatcgcttacatctctcagcgacgacgtggtatggtacg
gatgccatggatcgatacggagatgatcatttctcggactgcaatttggccgacgtacac
gcgctcgtgcatcaagttggcgatcaaactaagcgttggaaaactgccgaagttccagca
ttggtggagctcgatcgcgagtatccatcggtgtgtgctgatgtgaaacttttgacgttt
aggggttgtgtgttcgagattgacgattctctcggcaaagatgcgcgtgttgatgagcag
agtagtatgtttccaagtgtgctggcgggcgaacgtcgaaacgtcgaacagattcttcgg
atttatggtggaaagctcgcacctgaaggcagaatggggacacatattgtgcgcatgtac
gatgactccgttgtctttgaagatatggatgatggaagaaagcaagtttcgctctcttgg
gtgaaacgttgcatcgaccggtcgacaacggctgatgtagtctaa
DBGET
integrated database retrieval system